Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15925

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
3,513,082	-				-0.5
3,513,166	+				+0.8
3,513,166	+				+2.2
3,513,166	+				+0.2
3,513,166	+				-1.8
3,513,166	+				+2.1
3,513,166	+				-0.6
3,513,166	+				-0.5
3,513,167	-				-1.0
3,513,167	-				-1.5
3,513,167	-				-0.2
3,513,167	-				+0.2
3,513,167	-				-0.2
3,513,376	+		AO353_15920	0.26	+1.0
3,513,376	+		AO353_15920	0.26	-0.6
3,513,377	-		AO353_15920	0.27	-1.5
3,513,377	-		AO353_15920	0.27	+1.1
3,513,377	-		AO353_15920	0.27	+3.4
3,513,503	+		AO353_15920	0.42	-0.8
3,513,504	-		AO353_15920	0.43	-1.3
3,513,504	-		AO353_15920	0.43	-1.2
3,513,504	-		AO353_15920	0.43	-1.0
3,513,504	-		AO353_15920	0.43	-1.7
3,513,548	+		AO353_15920	0.48	+1.1
3,513,548	+		AO353_15920	0.48	-0.2
3,513,548	+		AO353_15920	0.48	+1.8
3,513,548	+		AO353_15920	0.48	+0.2
3,513,548	+		AO353_15920	0.48	-1.2
3,513,548	+		AO353_15920	0.48	+1.3
3,513,548	+		AO353_15920	0.48	+0.0
3,513,548	+		AO353_15920	0.48	-0.5
3,513,549	-		AO353_15920	0.48	+1.8
3,513,549	-		AO353_15920	0.48	-0.8
3,513,549	-		AO353_15920	0.48	-0.3
3,513,549	-		AO353_15920	0.48	-0.2
3,513,549	-		AO353_15920	0.48	+1.8
3,513,671	+		AO353_15920	0.64	+0.5
3,513,671	+		AO353_15920	0.64	+1.5
3,513,672	-		AO353_15920	0.64	+0.4
3,513,672	-		AO353_15920	0.64	-2.3
3,513,749	+		AO353_15920	0.73	+0.2
3,513,749	+		AO353_15920	0.73	+1.8
3,513,750	-		AO353_15920	0.74	+0.8
3,513,750	-		AO353_15920	0.74	-0.2
3,513,750	-		AO353_15920	0.74	-1.8
3,513,750	-		AO353_15920	0.74	-0.8
3,513,750	-		AO353_15920	0.74	-0.6
3,513,750	-		AO353_15920	0.74	-0.0
3,513,797	+		AO353_15920	0.80	-0.2
3,513,797	+		AO353_15920	0.80	+0.2
3,513,797	+		AO353_15920	0.80	-2.0
3,513,797	+		AO353_15920	0.80	-0.3
3,513,797	+		AO353_15920	0.80	+0.7
3,513,798	-		AO353_15920	0.80	+0.6
3,513,798	-		AO353_15920	0.80	-0.3
3,513,798	-		AO353_15920	0.80	-0.3
3,513,798	-		AO353_15920	0.80	-1.3
3,513,798	-		AO353_15920	0.80	+0.8
3,513,799	+		AO353_15920	0.80	+0.0
3,513,800	-		AO353_15920	0.80	-0.4
3,513,867	+		AO353_15920	0.88	-1.0
3,513,868	-		AO353_15920	0.89	-0.8
3,513,868	-		AO353_15920	0.89	+1.8
3,513,996	+				-1.1
3,513,997	-				+1.8
3,513,997	-				-0.7
3,514,053	+				+0.5
3,514,188	+				-2.5
3,514,188	+				-1.3
3,514,188	+				-2.4
3,514,188	+				-1.6
3,514,188	+				-0.5
3,514,189	-				-2.3
3,514,189	-				-1.9
3,514,189	-				-1.9
3,514,236	+		AO353_15925	0.11	+1.2
3,514,236	+		AO353_15925	0.11	+2.8
3,514,236	+		AO353_15925	0.11	-0.5
3,514,236	+		AO353_15925	0.11	+1.8
3,514,236	+		AO353_15925	0.11	+0.5
3,514,236	+		AO353_15925	0.11	-1.8
3,514,236	+		AO353_15925	0.11	+1.6
3,514,236	+		AO353_15925	0.11	-0.4
3,514,237	-		AO353_15925	0.11	-2.1
3,514,237	-		AO353_15925	0.11	+1.8
3,514,237	-		AO353_15925	0.11	-0.2
3,514,237	-		AO353_15925	0.11	+0.2
3,514,364	-		AO353_15925	0.19	-1.0
3,514,364	-		AO353_15925	0.19	+0.6
3,514,425	+		AO353_15925	0.22	+0.8
3,514,425	+		AO353_15925	0.22	-1.6
3,514,425	+		AO353_15925	0.22	-1.3
3,514,426	-		AO353_15925	0.22	-0.8
3,514,426	-		AO353_15925	0.22	-1.8
3,514,426	-		AO353_15925	0.22	-0.7
3,514,426	-		AO353_15925	0.22	-1.8
3,514,496	+		AO353_15925	0.26	-2.0
3,514,497	-		AO353_15925	0.26	-2.0
3,514,497	-		AO353_15925	0.26	-1.5
3,514,497	-		AO353_15925	0.26	+0.2
3,514,497	-		AO353_15925	0.26	-0.2
3,514,497	-		AO353_15925	0.26	-1.8
3,514,497	-		AO353_15925	0.26	+0.2
3,514,545	+		AO353_15925	0.29	-1.7
3,514,546	-		AO353_15925	0.29	-1.4
3,514,546	-		AO353_15925	0.29	-2.3
3,514,546	-		AO353_15925	0.29	-1.9
3,514,563	+		AO353_15925	0.30	-2.3
3,514,563	+		AO353_15925	0.30	+0.8
3,514,563	+		AO353_15925	0.30	-2.0
3,514,564	-		AO353_15925	0.30	-0.2
3,514,564	-		AO353_15925	0.30	-1.0
3,514,564	-		AO353_15925	0.30	-1.8
3,514,614	+		AO353_15925	0.33	-2.1
3,514,614	+		AO353_15925	0.33	+0.8
3,514,615	-		AO353_15925	0.34	-1.2
3,514,615	-		AO353_15925	0.34	+0.2
3,514,615	-		AO353_15925	0.34	+0.8
3,514,650	+		AO353_15925	0.36	-1.2
3,514,651	-		AO353_15925	0.36	-1.0
3,514,651	-		AO353_15925	0.36	-0.2
3,514,651	-		AO353_15925	0.36	-0.2
3,514,651	-		AO353_15925	0.36	+0.2
3,514,752	+		AO353_15925	0.42	-0.6
3,514,753	-		AO353_15925	0.42	-2.1
3,514,854	+		AO353_15925	0.48	-1.8
3,514,854	+		AO353_15925	0.48	-2.2
3,514,854	+		AO353_15925	0.48	+0.8
3,514,854	+		AO353_15925	0.48	-2.2
3,514,854	+		AO353_15925	0.48	-0.8
3,514,855	-		AO353_15925	0.48	-1.0
3,514,855	-		AO353_15925	0.48	-1.0
3,514,976	-		AO353_15925	0.55	+0.5
3,515,061	+		AO353_15925	0.60	-0.8
3,515,061	+		AO353_15925	0.60	+0.6
3,515,061	+		AO353_15925	0.60	-1.0
3,515,061	+		AO353_15925	0.60	-2.0
3,515,061	+		AO353_15925	0.60	-1.2
3,515,061	+		AO353_15925	0.60	+1.8
3,515,061	+		AO353_15925	0.60	-1.9
3,515,062	-		AO353_15925	0.60	+0.5
3,515,062	-		AO353_15925	0.60	-1.3
3,515,062	-		AO353_15925	0.60	+0.8
3,515,062	-		AO353_15925	0.60	-1.6
3,515,062	-		AO353_15925	0.60	-2.4
3,515,062	-		AO353_15925	0.60	-1.2
3,515,062	-		AO353_15925	0.60	-1.4
3,515,062	-		AO353_15925	0.60	-2.5
3,515,062	-		AO353_15925	0.60	-0.5
3,515,062	-		AO353_15925	0.60	-2.5
3,515,062	-		AO353_15925	0.60	-1.5
3,515,074	+		AO353_15925	0.61	-0.2
3,515,244	+		AO353_15925	0.71	+0.2
3,515,244	+		AO353_15925	0.71	-0.8
3,515,244	+		AO353_15925	0.71	+1.8
3,515,245	-		AO353_15925	0.71	+0.4
3,515,245	-		AO353_15925	0.71	-2.6
3,515,245	-		AO353_15925	0.71	+1.8
3,515,343	+		AO353_15925	0.77	-0.8
3,515,343	+				+1.8
3,515,344	-		AO353_15925	0.77	+1.8
3,515,344	-		AO353_15925	0.77	-3.1
3,515,344	-		AO353_15925	0.77	+0.2
3,515,344	-		AO353_15925	0.77	-1.5
3,515,344	-		AO353_15925	0.77	-2.4
3,515,344	-		AO353_15925	0.77	-0.8
3,515,344	-		AO353_15925	0.77	-0.4
3,515,344	-		AO353_15925	0.77	+0.2
3,515,431	+		AO353_15925	0.82	-1.0
3,515,700	+				-0.8
3,515,701	-				-0.2
3,515,701	-				-1.1
3,515,743	+				-1.3
3,515,743	+				-1.5
3,515,744	-				-0.3
3,515,796	+				-1.2
3,515,797	-				+0.2
3,516,006	+				-1.3
3,516,006	+				-1.4
3,516,007	-				-0.8
3,516,016	+				-0.5
3,516,048	+				-0.2
3,516,048	+				+1.8
3,516,048	+				-0.1
3,516,049	-				-1.3
3,516,093	+				-1.3
3,516,093	+				-1.0
3,516,093	+				-0.6
3,516,093	+				-1.0
3,516,093	+				+0.8
3,516,146	+				-1.5
3,516,156	+				-0.2
3,516,156	+				-1.5
3,516,156	+				+0.8
3,516,156	+				-0.2
3,516,156	+				+1.5
3,516,156	+				-0.2
3,516,157	-				+2.4
3,516,157	-				+0.6
3,516,157	-				-0.5
3,516,157	-				-1.5
3,516,157	-				-0.3
3,516,157	-				+1.8
3,516,157	-				-1.2
3,516,157	-				-0.2
3,516,157	-				-2.8
3,516,157	-				-0.2
3,516,269	+		AO353_15930	0.14	+0.8
3,516,269	+		AO353_15930	0.14	-0.2
3,516,270	-		AO353_15930	0.14	+0.8
3,516,338	-		AO353_15930	0.22	-0.5
3,516,363	-		AO353_15930	0.25	+1.1
3,516,384	+		AO353_15930	0.28	-0.5
3,516,384	+		AO353_15930	0.28	-0.3
3,516,385	-		AO353_15930	0.28	+0.8
3,516,385	-		AO353_15930	0.28	-1.0
3,516,385	-		AO353_15930	0.28	-0.2
3,516,385	-		AO353_15930	0.28	-1.2
3,516,684	+		AO353_15930	0.64	-2.2
3,516,685	-		AO353_15930	0.64	-0.9