Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14505

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
3,214,151	+		AO353_14495	0.78	-1.0
3,214,151	+		AO353_14495	0.78	+1.8
3,214,155	-		AO353_14495	0.79	+1.8
3,214,195	-		AO353_14495	0.81	+0.8
3,214,242	-		AO353_14495	0.84	+0.8
3,214,269	+		AO353_14495	0.85	+1.8
3,214,270	-		AO353_14495	0.85	+1.8
3,214,293	+		AO353_14495	0.87	-0.2
3,214,293	+		AO353_14495	0.87	+0.6
3,214,294	-		AO353_14495	0.87	+1.8
3,214,294	-		AO353_14495	0.87	+0.2
3,214,294	-		AO353_14495	0.87	+1.8
3,214,294	-		AO353_14495	0.87	+0.8
3,214,294	-		AO353_14495	0.87	+1.8
3,214,294	-		AO353_14495	0.87	+1.8
3,214,294	-		AO353_14495	0.87	+1.8
3,214,294	-		AO353_14495	0.87	-0.2
3,214,335	+		AO353_14495	0.89	-0.2
3,214,335	+		AO353_14495	0.89	+0.2
3,214,336	-		AO353_14495	0.89	+1.8
3,214,336	-		AO353_14495	0.89	+0.8
3,214,336	-		AO353_14495	0.89	-0.8
3,214,336	-		AO353_14495	0.89	+1.8
3,214,430	+				+0.8
3,214,493	+				+0.8
3,214,493	+				+0.8
3,214,494	-				-0.5
3,214,494	-				+1.8
3,214,494	-				+1.8
3,214,517	+				+0.2
3,214,517	+				+0.8
3,214,517	+				-2.4
3,214,517	+				-0.8
3,214,517	+				+0.1
3,214,518	-				+0.2
3,214,518	-				+1.8
3,214,521	+				-1.8
3,214,521	+				+1.0
3,214,521	+				+1.8
3,214,521	+				-0.2
3,214,522	-				+1.8
3,214,522	-				+0.2
3,214,522	-				+0.8
3,214,534	+				-0.2
3,214,534	+				+0.8
3,214,535	-				-0.8
3,214,535	-				+0.8
3,214,535	-				+0.2
3,214,535	-				-0.2
3,214,537	+				+1.8
3,214,537	+				+1.8
3,214,537	+				-0.8
3,214,538	-				+0.2
3,214,538	-				+2.2
3,214,538	-				-1.0
3,214,538	-				-1.0
3,214,538	-				+1.8
3,214,581	+		AO353_14500	0.11	+1.8
3,214,581	+		AO353_14500	0.11	+1.8
3,214,582	-		AO353_14500	0.11	+1.8
3,214,607	+		AO353_14500	0.16	-0.3
3,214,607	+		AO353_14500	0.16	+1.8
3,214,607	+		AO353_14500	0.16	+1.8
3,214,607	+		AO353_14500	0.16	+0.0
3,214,607	+		AO353_14500	0.16	-0.2
3,214,607	+		AO353_14500	0.16	-0.2
3,214,607	+		AO353_14500	0.16	-0.2
3,214,607	+		AO353_14500	0.16	+1.8
3,214,636	+		AO353_14500	0.22	+1.8
3,214,843	+		AO353_14500	0.64	-2.1
3,214,844	-		AO353_14500	0.65	-0.5
3,214,847	+		AO353_14500	0.65	-1.0
3,214,847	+		AO353_14500	0.65	+1.8
3,214,847	+		AO353_14500	0.65	+0.2
3,214,847	+		AO353_14500	0.65	+1.8
3,214,848	-		AO353_14500	0.65	-1.3
3,214,883	+		AO353_14500	0.73	-0.3
3,214,883	+		AO353_14500	0.73	-1.2
3,214,883	+		AO353_14500	0.73	+0.2
3,214,883	+		AO353_14500	0.73	+1.4
3,214,883	+		AO353_14500	0.73	-0.8
3,214,883	+		AO353_14500	0.73	-0.2
3,214,883	+		AO353_14500	0.73	+0.2
3,214,884	-		AO353_14500	0.73	-0.5
3,214,884	-		AO353_14500	0.73	+1.8
3,214,884	-		AO353_14500	0.73	-1.8
3,214,884	-		AO353_14500	0.73	+1.8
3,214,884	-		AO353_14500	0.73	+1.8
3,215,004	+				+0.2
3,215,004	+				-1.2
3,215,004	+				+0.8
3,215,004	+				-0.2
3,215,005	-				-0.3
3,215,005	-				-0.5
3,215,005	-				+1.8
3,215,005	-				-0.2
3,215,005	-				-0.5
3,215,015	+				-1.3
3,215,015	+				+0.6
3,215,015	+				+0.2
3,215,015	+				+0.2
3,215,016	-				+0.8
3,215,016	-				-2.0
3,215,016	-				-1.1
3,215,016	-				+2.4
3,215,025	+				+0.8
3,215,025	+				-0.4
3,215,050	+				-1.5
3,215,050	+				+0.2
3,215,050	+				+0.4
3,215,050	+				-0.4
3,215,050	+				+0.2
3,215,051	-				-1.2
3,215,051	-				+1.8
3,215,051	-				-1.4
3,215,051	-				-0.2
3,215,051	-				-2.1
3,215,051	-				-0.3
3,215,051	-				-0.5
3,215,051	-				-1.6
3,215,051	-				-2.2
3,215,051	-				-1.1
3,215,052	+				+0.2
3,215,052	+				-1.5
3,215,052	+				+0.8
3,215,052	+				+0.2
3,215,052	+				-1.5
3,215,052	+				-0.5
3,215,052	+				+1.8
3,215,052	+				+0.0
3,215,052	+				+0.6
3,215,052	+				-0.8
3,215,052	+				+0.2
3,215,052	+				-0.8
3,215,052	+				+1.1
3,215,052	+				-1.6
3,215,052	+				+1.8
3,215,052	+				-0.8
3,215,052	+				+1.2
3,215,052	+				-2.4
3,215,052	+				-1.0
3,215,052	+				-1.5
3,215,053	-				-1.0
3,215,053	-				+0.8
3,215,053	-				-0.0
3,215,053	-				-1.4
3,215,053	-				-1.1
3,215,053	-				-2.6
3,215,053	-				-0.8
3,215,053	-				-1.6
3,215,053	-				-3.0
3,215,053	-				-2.3
3,215,053	-				-2.1
3,215,053	-				-1.9
3,215,053	-				-1.8
3,215,053	-				+0.2
3,215,053	-				-2.1
3,215,053	-				-1.9
3,215,053	-				-0.3
3,215,053	-				-0.9
3,215,053	-				-1.6
3,215,053	-				+0.8
3,215,053	-				-0.2
3,215,053	-				-0.9
3,215,053	-				+0.0
3,215,053	-				-2.6
3,215,054	+				+1.1
3,215,054	+				-0.3
3,215,054	+				-2.6
3,215,054	+				-0.7
3,215,055	-				-1.5
3,215,055	-				-0.8
3,215,055	-				-0.2
3,215,055	-				-1.8
3,215,083	+				-2.6
3,215,191	+		AO353_14505	0.12	-0.5
3,215,191	+		AO353_14505	0.12	-0.5
3,215,192	-		AO353_14505	0.12	-1.5
3,215,207	-		AO353_14505	0.14	+0.2
3,215,330	+		AO353_14505	0.26	-1.9
3,215,402	+		AO353_14505	0.33	-0.2
3,215,402	+		AO353_14505	0.33	-0.8
3,215,402	+		AO353_14505	0.33	+0.8
3,215,402	+		AO353_14505	0.33	-1.0
3,215,403	-		AO353_14505	0.33	-0.5
3,215,403	-		AO353_14505	0.33	-0.2
3,215,403	-		AO353_14505	0.33	-0.2
3,215,403	-		AO353_14505	0.33	-2.2
3,215,403	-		AO353_14505	0.33	-0.5
3,215,488	-		AO353_14505	0.41	-1.6
3,215,488	-		AO353_14505	0.41	-2.3
3,215,518	+		AO353_14505	0.44	-0.5
3,215,519	-		AO353_14505	0.45	-2.1
3,215,522	+		AO353_14505	0.45	-2.6
3,215,522	+		AO353_14505	0.45	-1.2
3,215,522	+		AO353_14505	0.45	-0.5
3,215,522	+		AO353_14505	0.45	-0.2
3,215,523	-		AO353_14505	0.45	-1.6
3,215,523	-		AO353_14505	0.45	-0.5
3,215,523	-		AO353_14505	0.45	+1.8
3,215,523	-		AO353_14505	0.45	-0.2
3,215,523	-		AO353_14505	0.45	-0.8
3,215,523	-		AO353_14505	0.45	+0.2
3,215,553	+		AO353_14505	0.48	-2.2
3,215,553	+		AO353_14505	0.48	-2.6
3,215,564	+		AO353_14505	0.49	-1.2
3,215,565	-		AO353_14505	0.49	+0.8
3,215,565	-		AO353_14505	0.49	+0.0
3,215,608	+		AO353_14505	0.53	-0.2
3,215,608	+		AO353_14505	0.53	+0.6
3,215,608	+		AO353_14505	0.53	-0.9
3,215,608	+		AO353_14505	0.53	-1.5
3,215,608	+		AO353_14505	0.53	+0.8
3,215,608	+		AO353_14505	0.53	-0.2
3,215,608	+		AO353_14505	0.53	-1.2
3,215,608	+		AO353_14505	0.53	-1.0
3,215,609	-		AO353_14505	0.53	+0.2
3,215,609	-				+1.2
3,215,609	-		AO353_14505	0.53	-1.9
3,215,609	-		AO353_14505	0.53	-0.8
3,215,609	-		AO353_14505	0.53	+0.8
3,215,735	+		AO353_14505	0.66	-1.3
3,215,735	+		AO353_14505	0.66	-0.4
3,215,735	+		AO353_14505	0.66	+0.5
3,215,736	-		AO353_14505	0.66	-0.2
3,215,736	-		AO353_14505	0.66	+0.2
3,215,736	-		AO353_14505	0.66	+0.8
3,215,780	+		AO353_14505	0.70	-0.2
3,215,780	+		AO353_14505	0.70	+0.2
3,215,780	+		AO353_14505	0.70	-2.8
3,215,780	+		AO353_14505	0.70	+0.8
3,215,780	+		AO353_14505	0.70	+0.1
3,215,780	+		AO353_14505	0.70	-1.2
3,215,780	+		AO353_14505	0.70	+0.5
3,215,780	+		AO353_14505	0.70	+1.8
3,215,780	+		AO353_14505	0.70	+0.2
3,215,780	+		AO353_14505	0.70	-0.5
3,215,780	+		AO353_14505	0.70	+1.8
3,215,781	-		AO353_14505	0.70	+0.2
3,215,781	-		AO353_14505	0.70	-1.5
3,215,781	-		AO353_14505	0.70	-1.6
3,215,781	-		AO353_14505	0.70	-1.3
3,215,781	-		AO353_14505	0.70	-0.8
3,215,781	-		AO353_14505	0.70	-0.5
3,215,781	-		AO353_14505	0.70	-1.0
3,215,781	-		AO353_14505	0.70	-2.0
3,215,807	+		AO353_14505	0.73	-3.1
3,215,807	+		AO353_14505	0.73	-0.2
3,215,807	+		AO353_14505	0.73	+1.8
3,215,807	+		AO353_14505	0.73	+1.8
3,215,808	-		AO353_14505	0.73	-1.5
3,215,808	-		AO353_14505	0.73	-1.3
3,215,808	-		AO353_14505	0.73	-0.5
3,215,808	-		AO353_14505	0.73	-1.2
3,215,808	-		AO353_14505	0.73	-1.1
3,215,808	-		AO353_14505	0.73	+1.8
3,215,808	-		AO353_14505	0.73	+0.2
3,215,840	+		AO353_14505	0.76	+0.8
3,215,840	+		AO353_14505	0.76	-2.3
3,215,840	+		AO353_14505	0.76	-1.3
3,215,840	+		AO353_14505	0.76	-2.3
3,215,840	+		AO353_14505	0.76	-2.0
3,215,840	+		AO353_14505	0.76	-1.3
3,215,841	-		AO353_14505	0.76	-0.3
3,215,841	-		AO353_14505	0.76	-1.6
3,215,884	+		AO353_14505	0.80	-0.2
3,215,885	-		AO353_14505	0.81	-1.3
3,215,885	-		AO353_14505	0.81	-0.2
3,215,890	+		AO353_14505	0.81	-1.6
3,215,890	+		AO353_14505	0.81	-2.0
3,215,905	+		AO353_14505	0.82	+0.2
3,215,906	-		AO353_14505	0.83	-0.2
3,215,983	+				-0.2
3,215,983	+				-0.2
3,215,983	+				-0.8
3,215,983	+				-0.2
3,215,984	-				+0.2
3,215,984	-				-1.6
3,216,080	+				+1.8
3,216,080	+				-1.3
3,216,080	+				-2.0
3,216,081	-				-1.7
3,216,081	-				+0.8
3,216,081	-				-0.2
3,216,096	-				-1.8
3,216,111	+				-1.4
3,216,111	+				+0.5
3,216,111	+				-2.4
3,216,111	+				+0.8
3,216,112	-				-1.1
3,216,112	-				-0.8
3,216,149	+				+0.8
3,216,149	+				+0.5
3,216,149	+				-0.9
3,216,150	-				+0.2
3,216,219	+				+0.2
3,216,348	-		AO353_14510	0.14	-0.2
3,216,348	-		AO353_14510	0.14	+1.8