Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12755

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
2,806,232	-				-0.2
2,806,249	-				+0.2
2,806,249	-				-1.1
2,806,334	+		AO353_12750	0.17	-0.6
2,806,334	+		AO353_12750	0.17	-0.7
2,806,334	+		AO353_12750	0.17	+0.2
2,806,335	-		AO353_12750	0.17	-0.2
2,806,335	-		AO353_12750	0.17	-0.2
2,806,335	-		AO353_12750	0.17	+0.0
2,806,335	-		AO353_12750	0.17	-1.6
2,806,335	-		AO353_12750	0.17	+1.8
2,806,335	-		AO353_12750	0.17	-1.7
2,806,389	+		AO353_12750	0.27	+0.4
2,806,389	+		AO353_12750	0.27	-0.6
2,806,389	+		AO353_12750	0.27	-0.6
2,806,389	+		AO353_12750	0.27	+1.2
2,806,389	+		AO353_12750	0.27	-2.7
2,806,389	+		AO353_12750	0.27	+0.8
2,806,390	-		AO353_12750	0.28	-1.4
2,806,390	-		AO353_12750	0.28	+2.8
2,806,390	-		AO353_12750	0.28	-1.8
2,806,390	-		AO353_12750	0.28	-1.2
2,806,390	-		AO353_12750	0.28	+1.2
2,806,390	-		AO353_12750	0.28	+0.3
2,806,390	-		AO353_12750	0.28	-0.5
2,806,390	-		AO353_12750	0.28	-2.2
2,806,437	+		AO353_12750	0.37	+0.2
2,806,437	+		AO353_12750	0.37	-0.4
2,806,437	+		AO353_12750	0.37	+0.8
2,806,437	+		AO353_12750	0.37	-2.1
2,806,437	+		AO353_12750	0.37	-1.2
2,806,437	+		AO353_12750	0.37	-0.7
2,806,437	+		AO353_12750	0.37	+0.4
2,806,437	+		AO353_12750	0.37	-1.2
2,806,438	-		AO353_12750	0.37	+0.2
2,806,438	-		AO353_12750	0.37	-0.6
2,806,438	-		AO353_12750	0.37	+0.8
2,806,438	-		AO353_12750	0.37	-2.7
2,806,438	-		AO353_12750	0.37	+0.2
2,806,438	-		AO353_12750	0.37	-0.9
2,806,438	-		AO353_12750	0.37	+2.8
2,806,438	-		AO353_12750	0.37	-2.2
2,806,438	-				+2.2
2,806,438	-		AO353_12750	0.37	+0.4
2,806,438	-		AO353_12750	0.37	+0.5
2,806,674	+		AO353_12750	0.82	-0.2
2,806,674	+		AO353_12750	0.82	+1.4
2,806,675	-		AO353_12750	0.82	+0.8
2,806,675	-		AO353_12750	0.82	+1.8
2,806,675	-		AO353_12750	0.82	+0.9
2,806,675	-		AO353_12750	0.82	-0.1
2,806,675	-		AO353_12750	0.82	-1.7
2,806,747	+				+0.2
2,806,747	+				-2.3
2,806,747	+				-1.1
2,806,747	+				-1.8
2,806,747	+				-0.8
2,806,747	+				+0.0
2,806,747	+				-0.2
2,806,747	+				-1.2
2,806,747	+				+0.9
2,806,747	+				+0.0
2,806,747	+				-0.1
2,806,747	+				-1.2
2,806,747	+				-0.6
2,806,747	+				+2.8
2,806,747	+				-3.6
2,806,747	+				-2.8
2,806,747	+				+1.8
2,806,747	+				+0.2
2,806,747	+				+0.4
2,806,747	+				-0.8
2,806,747	+				-0.1
2,806,747	+				+2.2
2,806,747	+				+0.8
2,806,747	+				-0.1
2,806,747	+				-0.5
2,806,747	+				+0.2
2,806,747	+				-0.8
2,806,748	-				-0.4
2,806,748	-				-1.9
2,806,748	-				+0.2
2,806,748	-				+0.8
2,806,748	-				-1.2
2,806,748	-				-1.2
2,806,748	-				-1.2
2,806,748	-				+0.2
2,806,748	-				-0.6
2,806,748	-				+1.8
2,806,748	-				-0.6
2,806,748	-				+0.5
2,806,748	-				+0.8
2,806,748	-				-1.8
2,806,748	-				-0.7
2,806,748	-				+0.2
2,806,749	+				-1.9
2,806,749	+				-1.7
2,806,749	+				-3.0
2,806,749	+				+0.2
2,806,749	+				+1.2
2,806,749	+				-0.2
2,806,749	+				+0.2
2,806,749	+				+0.2
2,806,749	+				-2.1
2,806,749	+				-0.7
2,806,749	+				+0.2
2,806,749	+				-0.7
2,806,749	+				-1.4
2,806,749	+				-0.8
2,806,749	+				-0.8
2,806,749	+				-0.9
2,806,749	+				-0.2
2,806,749	+				-0.8
2,806,749	+				+0.2
2,806,749	+				-0.9
2,806,749	+				-0.2
2,806,749	+				+0.2
2,806,749	+				+0.2
2,806,749	+				+0.8
2,806,749	+				+1.2
2,806,749	+				+1.8
2,806,749	+				-2.5
2,806,749	+				+0.6
2,806,749	+				+0.2
2,806,749	+				-0.2
2,806,749	+				-0.6
2,806,749	+				+1.8
2,806,750	-				-1.8
2,806,750	-				-1.2
2,806,750	-				+1.3
2,806,750	-				-0.5
2,806,750	-				+0.0
2,806,750	-				+0.8
2,806,750	-				-1.1
2,806,750	-				-1.7
2,806,750	-				-0.8
2,806,750	-				-2.3
2,806,750	-				-0.6
2,806,750	-				-0.2
2,806,750	-				-0.8
2,806,750	-				+0.9
2,806,750	-				-0.2
2,806,750	-				-1.2
2,806,750	-				-0.3
2,806,750	-				-1.8
2,806,750	-				-0.2
2,806,750	-				+0.8
2,806,750	-				-1.1
2,806,750	-				-1.6
2,806,750	-				-0.2
2,806,750	-				-0.4
2,806,750	-				-2.2
2,806,750	-				-2.4
2,806,750	-				-0.6
2,806,750	-				+0.8
2,806,750	-				+0.6
2,806,750	-				-1.1
2,806,759	+				-0.4
2,806,759	+				-0.8
2,806,760	-				-0.7
2,806,760	-				+1.8
2,806,785	+				-1.7
2,806,785	+				-0.4
2,806,785	+				+0.8
2,806,830	+				+0.8
2,806,854	-				-0.8
2,806,869	+				-1.1
2,806,920	-				+0.8
2,806,925	+				-1.1
2,806,925	+				+2.1
2,806,926	-				+0.2
2,806,926	-				-1.7
2,806,926	-				+1.8
2,807,081	-				-0.1
2,807,081	-				+0.2
2,807,081	-				-1.1
2,807,160	+				+1.3
2,807,160	+				-1.8
2,807,160	+				+1.8
2,807,161	-				+1.2
2,807,161	-				+1.0
2,807,161	-				+1.8
2,807,161	-				-0.2
2,807,161	-				-2.8
2,807,161	-				+0.2
2,807,161	-				-1.4
2,807,195	+		AO353_12755	0.15	-1.6
2,807,204	+		AO353_12755	0.16	-1.4
2,807,204	+		AO353_12755	0.16	-2.8
2,807,204	+		AO353_12755	0.16	+0.8
2,807,205	-		AO353_12755	0.17	+0.8
2,807,205	-		AO353_12755	0.17	-0.8
2,807,205	-		AO353_12755	0.17	-1.7
2,807,205	-		AO353_12755	0.17	-1.3
2,807,205	-		AO353_12755	0.17	-1.5
2,807,205	-		AO353_12755	0.17	-0.4
2,807,205	-		AO353_12755	0.17	-1.2
2,807,205	-		AO353_12755	0.17	-0.8
2,807,205	-		AO353_12755	0.17	-1.7
2,807,276	-		AO353_12755	0.30	-0.7
2,807,309	+		AO353_12755	0.37	-1.2
2,807,309	+		AO353_12755	0.37	-1.6
2,807,309	+		AO353_12755	0.37	-0.1
2,807,309	+		AO353_12755	0.37	+0.8
2,807,310	-		AO353_12755	0.37	-0.2
2,807,310	-		AO353_12755	0.37	-0.6
2,807,310	-		AO353_12755	0.37	+0.8
2,807,310	-		AO353_12755	0.37	-1.7
2,807,546	+		AO353_12755	0.82	-1.6
2,807,546	+		AO353_12755	0.82	-0.6
2,807,611	+				+2.8
2,807,621	+				-1.7
2,807,621	+				+0.8
2,807,621	+				+0.4
2,807,621	+				-1.6
2,807,621	+				+0.8
2,807,621	+				+1.2
2,807,621	+				+1.8
2,807,621	+				-0.2
2,807,622	-				+0.4
2,807,622	-				-0.6
2,807,622	-				-1.1
2,807,622	-				-0.6
2,807,622	-				+1.8
2,807,622	-				+1.2
2,807,704	+				+0.4
2,807,743	-				-1.1
2,807,782	+				+1.8
2,807,855	-				-0.4
2,808,024	+				+0.6
2,808,024	+				-2.4
2,808,024	+				-1.4
2,808,024	+				+1.8
2,808,024	+				+0.2
2,808,024	+				-1.8
2,808,024	+				-1.1
2,808,024	+				-0.8
2,808,024	+				+2.8
2,808,024	+				-1.2
2,808,025	-				-1.2
2,808,025	-				+0.2
2,808,025	-				-0.8
2,808,025	-				-1.4
2,808,025	-				+1.8
2,808,025	-				-0.6
2,808,028	+				+0.2
2,808,028	+				-1.9
2,808,028	+				+0.8
2,808,028	+				-1.3
2,808,028	+				+0.2
2,808,028	+				-0.6
2,808,028	+				+0.9
2,808,028	+				-0.6
2,808,028	+				-1.9
2,808,029	-				+2.8
2,808,029	-				-1.7
2,808,029	-				+1.8
2,808,036	+				-0.5
2,808,037	-				-2.2
2,808,037	-				-1.1
2,808,076	+				+0.2
2,808,076	+				-1.6
2,808,077	-				-0.6
2,808,077	-				+0.8
2,808,078	+				+0.3
2,808,079	-				-0.2
2,808,092	-				+1.8
2,808,097	+				-0.8
2,808,220	+		AO353_12760	0.26	-1.4
2,808,309	-		AO353_12760	0.56	+0.6
2,808,309	-		AO353_12760	0.56	+1.8
2,808,309	-		AO353_12760	0.56	-1.8
2,808,309	-		AO353_12760	0.56	+1.0
2,808,309	-		AO353_12760	0.56	+1.8
2,808,309	-		AO353_12760	0.56	-1.0
2,808,309	-		AO353_12760	0.56	+0.3
2,808,309	-		AO353_12760	0.56	+0.5
2,808,355	+		AO353_12760	0.72	+0.5
2,808,373	+		AO353_12760	0.78	+0.6
2,808,373	+		AO353_12760	0.78	-0.2
2,808,373	+		AO353_12760	0.78	-0.8
2,808,373	+		AO353_12760	0.78	+0.4
2,808,373	+		AO353_12760	0.78	+0.3
2,808,373	+		AO353_12760	0.78	-1.7
2,808,373	+		AO353_12760	0.78	-2.1
2,808,373	+		AO353_12760	0.78	-1.6
2,808,373	+		AO353_12760	0.78	+0.2
2,808,373	+		AO353_12760	0.78	+0.9
2,808,374	-		AO353_12760	0.78	-0.6
2,808,374	-		AO353_12760	0.78	+1.3
2,808,374	-		AO353_12760	0.78	+2.1
2,808,374	-		AO353_12760	0.78	-1.1
2,808,374	-		AO353_12760	0.78	+1.8
2,808,374	-		AO353_12760	0.78	-0.3
2,808,374	-		AO353_12760	0.78	-0.6
2,808,374	-		AO353_12760	0.78	-0.1
2,808,374	-		AO353_12760	0.78	+1.1
2,808,375	+		AO353_12760	0.78	+1.8
2,808,376	-		AO353_12760	0.79	-0.2
2,808,403	+		AO353_12760	0.88	+1.2
2,808,404	-		AO353_12760	0.88	-0.6
2,808,414	+				+0.2
2,808,414	+				-0.2
2,808,414	+				-1.5
2,808,414	+				-2.3
2,808,414	+				-1.4
2,808,414	+				+0.4
2,808,414	+				-2.4
2,808,414	+				-1.1
2,808,414	+				+0.8
2,808,414	+				-0.6
2,808,414	+				+0.2
2,808,415	-				-0.9
2,808,415	-				-1.1
2,808,415	-				+0.6
2,808,415	-				-0.5