Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12580

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
2,770,291	+				+0.8
2,770,291	+				-0.0
2,770,333	+		AO353_12570	0.12	-1.0
2,770,333	+		AO353_12570	0.12	-0.0
2,770,406	+		AO353_12570	0.31	-1.4
2,770,406	+		AO353_12570	0.31	+0.2
2,770,407	-		AO353_12570	0.31	+1.2
2,770,407	-		AO353_12570	0.31	-0.7
2,770,517	+		AO353_12570	0.59	-2.0
2,770,518	-		AO353_12570	0.59	+0.8
2,770,518	-		AO353_12570	0.59	-0.6
2,770,638	+		AO353_12570	0.90	-1.4
2,770,639	-				-1.4
2,770,639	-				-0.2
2,770,639	-				-0.6
2,770,639	-				-1.6
2,770,639	-				+0.8
2,770,639	-				-1.2
2,770,676	+				-0.2
2,770,676	+				+0.2
2,770,676	+				-0.1
2,770,677	-				-1.3
2,770,677	-				-0.6
2,770,677	-				+1.8
2,770,965	+		AO353_12575	0.54	+0.0
2,770,965	+		AO353_12575	0.54	+0.8
2,770,965	+		AO353_12575	0.54	-0.6
2,770,965	+		AO353_12575	0.54	-2.6
2,770,965	+		AO353_12575	0.54	+1.8
2,770,965	+		AO353_12575	0.54	-1.6
2,770,966	-		AO353_12575	0.54	+0.8
2,770,966	-		AO353_12575	0.54	+1.2
2,770,987	+		AO353_12575	0.58	+0.2
2,771,074	-		AO353_12575	0.74	+1.8
2,771,074	-		AO353_12575	0.74	+0.2
2,771,074	-		AO353_12575	0.74	-0.2
2,771,114	+		AO353_12575	0.81	+2.2
2,771,115	-		AO353_12575	0.81	+0.3
2,771,321	-		AO353_12580	0.13	-2.8
2,771,321	-		AO353_12580	0.13	+0.5
2,771,455	+		AO353_12580	0.28	-1.2
2,772,079	+				-1.4
2,772,079	+				-0.8
2,772,079	+				+3.3
2,772,079	+				-1.9
2,772,080	-				-1.8
2,772,147	+				-0.0
2,772,148	-				+1.3
2,772,188	+		AO353_12585	0.11	+0.8
2,772,188	+		AO353_12585	0.11	+1.8
2,772,189	-		AO353_12585	0.11	+1.8
2,772,239	+		AO353_12585	0.16	-1.2
2,772,239	+		AO353_12585	0.16	+0.0
2,772,239	+		AO353_12585	0.16	+0.0
2,772,239	+		AO353_12585	0.16	+0.2
2,772,239	+		AO353_12585	0.16	-0.9
2,772,240	-		AO353_12585	0.16	-0.9
2,772,243	+		AO353_12585	0.16	-0.6
2,772,243	+		AO353_12585	0.16	-0.6
2,772,438	+		AO353_12585	0.34	+0.5
2,772,439	-		AO353_12585	0.34	-0.6
2,772,490	+		AO353_12585	0.39	-0.6
2,772,491	-		AO353_12585	0.39	-0.7
2,772,491	-		AO353_12585	0.39	+0.2
2,772,839	-		AO353_12585	0.71	-1.2
2,772,839	-		AO353_12585	0.71	-1.2
2,772,855	+		AO353_12585	0.72	+2.8
2,772,855	+		AO353_12585	0.72	-1.0
2,772,855	+		AO353_12585	0.72	+0.2
2,772,856	-		AO353_12585	0.72	+0.2
2,772,856	-		AO353_12585	0.72	+0.2