Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12560

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
2,768,370	-		AO353_12555	0.18	+0.8
2,768,491	+		AO353_12555	0.28	-0.6
2,768,492	-		AO353_12555	0.28	-0.1
2,768,612	-		AO353_12555	0.38	-0.6
2,768,716	+		AO353_12555	0.47	-0.7
2,768,716	+		AO353_12555	0.47	+0.2
2,768,716	+		AO353_12555	0.47	-1.3
2,768,716	+		AO353_12555	0.47	+0.8
2,768,717	-		AO353_12555	0.47	-1.9
2,768,717	-		AO353_12555	0.47	+0.8
2,768,717	-		AO353_12555	0.47	+0.4
2,768,852	+		AO353_12555	0.58	+1.0
2,768,852	+		AO353_12555	0.58	-0.2
2,768,852	+		AO353_12555	0.58	-0.7
2,768,852	+		AO353_12555	0.58	+0.8
2,768,853	-		AO353_12555	0.58	-1.2
2,768,888	+		AO353_12555	0.61	+1.0
2,768,888	+		AO353_12555	0.61	+1.2
2,768,889	-		AO353_12555	0.61	-0.0
2,768,889	-		AO353_12555	0.61	-0.8
2,768,889	-		AO353_12555	0.61	+0.2
2,769,089	+		AO353_12555	0.77	+1.8
2,769,089	+		AO353_12555	0.77	+0.4
2,769,090	-		AO353_12555	0.77	+0.8
2,769,136	-		AO353_12555	0.81	-0.6
2,769,137	+		AO353_12555	0.81	+2.8
2,769,137	+		AO353_12555	0.81	-0.6
2,769,137	+		AO353_12555	0.81	-0.3
2,769,137	+		AO353_12555	0.81	+1.2
2,769,138	-		AO353_12555	0.81	-0.1
2,769,264	-				+0.2
2,769,381	+				+1.3
2,769,381	+				-0.9
2,769,381	+				+0.8
2,769,384	+				+1.2
2,769,384	+				-1.2
2,769,384	+				-0.5
2,769,384	+				-0.4
2,769,385	-				-0.5
2,769,385	-				-3.7
2,769,385	-				+0.2
2,769,385	-				+1.2
2,769,385	-				-1.2
2,769,411	+				+0.4
2,769,431	+		AO353_12560	0.14	-1.8
2,769,432	-		AO353_12560	0.14	-1.2
2,769,556	+		AO353_12560	0.41	-1.1
2,769,556	+		AO353_12560	0.41	-0.8
2,769,556	+		AO353_12560	0.41	-1.2
2,769,556	+		AO353_12560	0.41	-1.7
2,769,556	+		AO353_12560	0.41	+0.4
2,769,557	-		AO353_12560	0.42	-0.8
2,769,557	-		AO353_12560	0.42	-0.3
2,769,662	-		AO353_12560	0.65	-1.7
2,769,700	+		AO353_12560	0.73	+0.2
2,769,706	+		AO353_12560	0.74	-1.0
2,769,706	+		AO353_12560	0.74	-0.2
2,769,707	-		AO353_12560	0.75	-0.8
2,769,707	-		AO353_12560	0.75	-0.6
2,769,751	+		AO353_12560	0.84	+0.8
2,769,752	-		AO353_12560	0.84	-1.2
2,769,752	-		AO353_12560	0.84	-3.0
2,769,752	-		AO353_12560	0.84	+0.6
2,769,752	-		AO353_12560	0.84	-0.2
2,769,752	-		AO353_12560	0.84	-0.0
2,769,854	+				-0.2
2,769,854	+				-0.0
2,769,855	-				-0.2
2,769,855	-				+1.8
2,769,855	-				-0.6
2,769,855	-				-1.7
2,769,983	+		AO353_12565	0.34	+0.2
2,769,983	+		AO353_12565	0.34	-1.2
2,769,984	-		AO353_12565	0.34	+0.3
2,769,984	-		AO353_12565	0.34	+1.8
2,770,060	+		AO353_12565	0.50	-1.1
2,770,061	-		AO353_12565	0.50	-1.2
2,770,142	+		AO353_12565	0.68	-1.0
2,770,143	-		AO353_12565	0.68	-0.6
2,770,291	+				+0.8
2,770,291	+				-0.0
2,770,333	+		AO353_12570	0.12	-1.0
2,770,333	+		AO353_12570	0.12	-0.0
2,770,406	+		AO353_12570	0.31	-1.4
2,770,406	+		AO353_12570	0.31	+0.2
2,770,407	-		AO353_12570	0.31	+1.2
2,770,407	-		AO353_12570	0.31	-0.7
2,770,517	+		AO353_12570	0.59	-2.0
2,770,518	-		AO353_12570	0.59	+0.8
2,770,518	-		AO353_12570	0.59	-0.6
2,770,638	+		AO353_12570	0.90	-1.4
2,770,639	-				-1.4
2,770,639	-				-0.2
2,770,639	-				-0.6
2,770,639	-				-1.6
2,770,639	-				+0.8
2,770,639	-				-1.2
2,770,676	+				-0.2
2,770,676	+				+0.2
2,770,676	+				-0.1
2,770,677	-				-1.3
2,770,677	-				-0.6
2,770,677	-				+1.8