Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09885

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
2,156,753	+		AO353_09880	0.16	-0.7
2,156,753	+		AO353_09880	0.16	-1.4
2,156,753	+		AO353_09880	0.16	-2.1
2,156,898	+		AO353_09880	0.31	-0.6
2,156,898	+		AO353_09880	0.31	-0.8
2,156,899	-		AO353_09880	0.32	+2.3
2,156,899	-		AO353_09880	0.32	-0.4
2,156,914	+		AO353_09880	0.33	+0.4
2,156,914	+		AO353_09880	0.33	+1.3
2,156,914	+		AO353_09880	0.33	-0.3
2,156,914	+		AO353_09880	0.33	+0.2
2,156,914	+		AO353_09880	0.33	+1.3
2,156,914	+		AO353_09880	0.33	+0.0
2,156,914	+		AO353_09880	0.33	-1.1
2,156,914	+		AO353_09880	0.33	+0.7
2,156,914	+		AO353_09880	0.33	-1.0
2,156,914	+		AO353_09880	0.33	+0.0
2,156,914	+		AO353_09880	0.33	-0.6
2,156,915	-		AO353_09880	0.33	-1.7
2,156,915	-		AO353_09880	0.33	-1.3
2,156,915	-		AO353_09880	0.33	+3.3
2,156,915	-		AO353_09880	0.33	+0.0
2,156,915	-		AO353_09880	0.33	+0.2
2,157,236	+		AO353_09880	0.67	+0.2
2,157,236	+		AO353_09880	0.67	+0.4
2,157,237	-		AO353_09880	0.67	-1.3
2,157,237	-		AO353_09880	0.67	-1.9
2,157,237	-		AO353_09880	0.67	+0.5
2,157,237	-		AO353_09880	0.67	-1.3
2,157,295	-		AO353_09880	0.73	-1.7
2,157,473	+				-1.1
2,157,473	+				-0.3
2,157,473	+				-2.6
2,157,473	+				-0.3
2,157,473	+				-1.6
2,157,473	+				+0.3
2,157,473	+				-1.7
2,157,473	+				+1.7
2,157,473	+				+0.6
2,157,473	+				+0.7
2,157,473	+				-0.3
2,157,474	-				-0.4
2,157,474	-				-0.1
2,157,474	-				+0.2
2,157,474	-				+1.7
2,157,474	-				-0.3
2,157,474	-				+0.7
2,157,507	+				+1.6
2,157,508	-				-1.3
2,157,560	+				-0.8
2,157,561	-				-1.1
2,157,562	+				+1.7
2,157,562	+				-0.6
2,157,562	+				-2.4
2,157,562	+				+0.3
2,157,562	+				-0.7
2,157,562	+				-1.3
2,157,562	+				+0.2
2,157,562	+				+0.2
2,157,562	+				-0.6
2,157,562	+				+0.3
2,157,562	+				-0.6
2,157,562	+				-1.1
2,157,562	+				+2.5
2,157,562	+				-1.0
2,157,563	-				+1.2
2,157,563	-				+1.2
2,157,563	-				+0.2
2,157,563	-				+0.2
2,157,563	-				-0.6
2,157,563	-				-2.1
2,157,563	-				-0.6
2,157,563	-				-0.6
2,157,563	-				+0.5
2,157,580	+				-2.8
2,157,580	+				-0.1
2,157,580	+				-0.4
2,157,581	-				-1.1
2,157,717	+				-2.1
2,157,717	+				+0.7
2,157,717	+				-0.1
2,157,717	+				+0.4
2,157,717	+				+2.3
2,157,717	+				+1.7
2,157,717	+				-0.3
2,157,718	-				+0.7
2,157,718	-				+0.0
2,157,718	-				-0.6
2,157,718	-				+1.4
2,157,731	+				+0.9
2,157,731	+				+0.6
2,157,731	+				-1.3
2,157,731	+				-0.3
2,157,731	+				-0.5
2,157,731	+				+1.7
2,157,731	+				-0.3
2,157,731	+				-2.4
2,157,731	+				+1.0
2,157,731	+				-0.8
2,157,731	+				-0.4
2,157,731	+				-2.5
2,157,731	+				+0.2
2,157,731	+				-0.5
2,157,731	+				-0.4
2,157,731	+				+0.6
2,157,732	-				+1.5
2,157,732	-				-1.3
2,157,732	-				-0.4
2,157,732	-				+1.7
2,157,732	-				+1.3
2,157,732	-				+0.2
2,157,732	-				-1.6
2,157,732	-				-2.2
2,157,732	-				-0.8
2,157,732	-				+0.5
2,157,732	-				-2.3
2,157,732	-				-0.3
2,157,732	-				-0.8
2,157,732	-				+0.3
2,157,732	-				+2.3
2,157,732	-				+1.7
2,157,732	-				+0.2
2,157,732	-				+0.7
2,157,732	-				-1.4
2,157,732	-				+0.4
2,157,732	-				-0.6
2,157,735	+				+2.3
2,157,735	+				-0.6
2,157,735	+				+1.7
2,157,735	+				-0.9
2,157,736	-				-2.1
2,157,736	-				-1.6
2,157,736	-				+1.7
2,157,736	-				-1.1
2,157,736	-				-0.3
2,157,736	-				+1.0
2,157,736	-				-0.8
2,157,759	+				+1.7
2,157,842	+		AO353_09885	0.15	-2.9
2,157,842	+		AO353_09885	0.15	+0.2
2,157,842	+		AO353_09885	0.15	-0.6
2,157,842	+		AO353_09885	0.15	-2.1
2,157,843	-		AO353_09885	0.15	-0.7
2,157,843	-				+1.7
2,157,953	+		AO353_09885	0.29	-0.6
2,157,983	+		AO353_09885	0.33	-1.8
2,158,567	+				+0.3
2,158,567	+				-0.3
2,158,567	+				+1.2
2,158,567	+				-0.8
2,158,568	-				-1.0
2,158,568	-				-0.1
2,158,568	-				-0.3
2,158,663	+		AO353_09890	0.12	+1.7
2,158,663	+		AO353_09890	0.12	+1.7
2,158,663	+		AO353_09890	0.12	+0.7
2,158,663	+		AO353_09890	0.12	+1.7
2,158,663	+		AO353_09890	0.12	+0.7
2,158,663	+		AO353_09890	0.12	+1.7
2,158,663	+		AO353_09890	0.12	-0.6
2,158,663	+		AO353_09890	0.12	+1.7
2,158,663	+		AO353_09890	0.12	+1.7
2,158,664	-		AO353_09890	0.12	+1.7
2,158,664	-		AO353_09890	0.12	+0.2
2,158,664	-		AO353_09890	0.12	+1.7
2,158,664	-		AO353_09890	0.12	+0.7
2,158,751	-		AO353_09890	0.22	-1.1
2,158,841	+		AO353_09890	0.33	+1.7
2,158,841	+		AO353_09890	0.33	+1.7
2,158,842	-		AO353_09890	0.33	+1.7
2,158,842	-		AO353_09890	0.33	+1.7
2,159,003	-		AO353_09890	0.52	-0.8
2,159,017	+		AO353_09890	0.54	+2.7
2,159,101	+		AO353_09890	0.64	+1.7
2,159,281	+		AO353_09890	0.86	+1.7
2,159,281	+		AO353_09890	0.86	+1.7
2,159,417	-				+1.3
2,159,457	+				-0.7
2,159,471	+				-1.3
2,159,471	+				+1.7
2,159,471	+				-1.1
2,159,472	-				+1.7
2,159,472	-				+0.4