Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09690

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
2,127,220	+		AO353_09685	0.36	+0.2
2,127,245	+		AO353_09685	0.41	-0.4
2,127,308	+		AO353_09685	0.55	-1.6
2,127,308	+		AO353_09685	0.55	+0.8
2,127,308	+		AO353_09685	0.55	+0.0
2,127,308	+		AO353_09685	0.55	-0.2
2,127,308	+		AO353_09685	0.55	+1.8
2,127,308	+		AO353_09685	0.55	-0.7
2,127,308	+		AO353_09685	0.55	-0.8
2,127,308	+		AO353_09685	0.55	-1.8
2,127,308	+		AO353_09685	0.55	+1.8
2,127,308	+		AO353_09685	0.55	-1.2
2,127,308	+		AO353_09685	0.55	-1.8
2,127,308	+		AO353_09685	0.55	-1.8
2,127,308	+		AO353_09685	0.55	-0.8
2,127,308	+		AO353_09685	0.55	+1.8
2,127,308	+		AO353_09685	0.55	+0.8
2,127,308	+		AO353_09685	0.55	-0.2
2,127,308	+		AO353_09685	0.55	+0.8
2,127,308	+		AO353_09685	0.55	-1.6
2,127,308	+		AO353_09685	0.55	-1.6
2,127,308	+		AO353_09685	0.55	-1.2
2,127,308	+		AO353_09685	0.55	+2.3
2,127,415	+		AO353_09685	0.78	+0.8
2,127,415	+		AO353_09685	0.78	-0.1
2,127,415	+		AO353_09685	0.78	-0.2
2,127,415	+		AO353_09685	0.78	+0.5
2,127,415	+		AO353_09685	0.78	-0.6
2,127,415	+		AO353_09685	0.78	+0.2
2,127,415	+		AO353_09685	0.78	+0.8
2,127,415	+		AO353_09685	0.78	+1.2
2,127,415	+		AO353_09685	0.78	+0.9
2,127,415	+		AO353_09685	0.78	+1.8
2,127,415	+		AO353_09685	0.78	+0.2
2,127,415	+		AO353_09685	0.78	-0.2
2,127,416	-		AO353_09685	0.78	-0.2
2,127,416	-		AO353_09685	0.78	-1.1
2,127,416	-		AO353_09685	0.78	-0.1
2,127,416	-		AO353_09685	0.78	+0.2
2,127,416	-		AO353_09685	0.78	+0.0
2,127,416	-		AO353_09685	0.78	-0.5
2,127,416	-		AO353_09685	0.78	-0.6
2,127,434	+		AO353_09685	0.82	+0.3
2,127,434	+		AO353_09685	0.82	+0.5
2,127,434	+		AO353_09685	0.82	-0.8
2,127,434	+		AO353_09685	0.82	+0.8
2,127,434	+		AO353_09685	0.82	-0.6
2,127,434	+		AO353_09685	0.82	-1.6
2,127,435	-		AO353_09685	0.83	-0.2
2,127,435	-		AO353_09685	0.83	-0.6
2,127,435	-		AO353_09685	0.83	-0.6
2,127,435	-		AO353_09685	0.83	+1.8
2,127,435	-		AO353_09685	0.83	+1.8
2,127,435	-		AO353_09685	0.83	+1.2
2,127,435	-		AO353_09685	0.83	+0.5
2,127,435	-		AO353_09685	0.83	-1.1
2,127,440	+		AO353_09685	0.84	+1.8
2,127,440	+		AO353_09685	0.84	+0.2
2,127,441	-		AO353_09685	0.84	+1.8
2,127,441	-		AO353_09685	0.84	+0.2
2,127,455	+		AO353_09685	0.87	+0.8
2,127,456	-		AO353_09685	0.87	-0.2
2,127,456	-		AO353_09685	0.87	+0.2
2,127,456	-		AO353_09685	0.87	-0.0
2,127,507	-				+0.8
2,127,509	+				+1.8
2,127,509	+				+1.8
2,127,510	-				-0.1
2,127,510	-				+1.8
2,127,510	-				-0.6
2,127,510	-				-1.0
2,127,540	+				+0.0
2,127,540	+				+1.3
2,127,540	+				-0.4
2,127,541	-				-1.7
2,127,541	-				-0.6
2,127,541	-				+0.2
2,127,541	-				-0.6
2,127,541	-				+0.2
2,127,541	-				+0.8
2,127,581	+				+1.8
2,127,582	-				-1.2
2,127,598	+				-0.2
2,127,623	+				+0.9
2,127,623	+				+0.4
2,127,626	+				-0.2
2,127,626	+				-0.2
2,127,626	+				+0.4
2,127,626	+				+0.2
2,127,626	+				+0.3
2,127,626	+				+1.0
2,127,626	+				-1.1
2,127,626	+				+0.8
2,127,626	+				+0.2
2,127,626	+				-0.1
2,127,626	+				+3.3
2,127,626	+				+0.4
2,127,626	+				-1.1
2,127,626	+				-0.4
2,127,626	+				+0.8
2,127,626	+				-1.1
2,127,663	-				+0.8
2,127,689	+				+3.3
2,127,689	+				-0.2
2,127,689	+				+1.1
2,127,690	-				+0.8
2,127,690	-				+1.8
2,127,690	-				-0.7
2,127,690	-				+0.5
2,127,690	-				-1.6
2,127,690	-				-1.6
2,127,690	-				-1.1
2,127,690	-				-0.1
2,127,690	-				-0.2
2,127,690	-				+0.8
2,127,690	-				+0.5
2,127,690	-				+0.8
2,127,707	+				-0.8
2,127,707	+				-0.1
2,127,707	+				+0.2
2,127,708	-				+0.4
2,127,708	-				+0.2
2,127,731	-				+0.8
2,127,773	+				+0.3
2,127,774	-				+0.2
2,127,774	-				+1.8
2,127,774	-				-0.2
2,127,779	+				-0.7
2,127,779	+				+0.2
2,127,779	+				+0.4
2,127,779	+				-0.9
2,127,780	-				-0.0
2,127,780	-				+1.8
2,127,780	-				+0.2
2,127,780	-				+2.1
2,127,780	-				-1.1
2,127,780	-				-0.2
2,127,804	+				+0.2
2,127,804	+				-0.8
2,127,804	+				+2.8
2,127,804	+				+0.1
2,127,804	+				-1.1
2,127,804	+				-3.0
2,127,805	-				+1.0
2,127,805	-				-2.7
2,127,805	-				+0.4
2,127,819	+				-0.2
2,127,820	-				+0.4
2,127,820	-				+1.8
2,127,821	+				+2.3
2,127,821	+				-1.1
2,127,821	+				-1.2
2,127,821	+				-0.9
2,127,821	+				+3.3
2,127,821	+				+2.8
2,127,821	+				+0.2
2,127,821	+				-0.8
2,127,821	+				+2.8
2,127,821	+				+0.2
2,127,821	+				-1.2
2,127,821	+				-0.8
2,127,821	+				+1.8
2,127,821	+				+0.2
2,127,821	+				-0.2
2,127,822	-				+0.3
2,127,822	-				-0.4
2,127,822	-				-1.8
2,127,822	-				+0.2
2,127,822	-				+1.3
2,127,822	-				+3.3
2,127,822	-				+0.8
2,127,822	-				+1.8
2,127,822	-				+1.2
2,127,822	-				-1.6
2,127,846	+				+1.8
2,127,847	-				+1.9
2,127,847	-				+1.8
2,127,854	+				+0.4
2,127,854	+				+0.2
2,127,854	+				-0.8
2,127,854	+				+0.8
2,127,854	+				-1.6
2,127,854	+				-0.2
2,127,854	+				-0.8
2,127,854	+				+1.8
2,127,855	-				+1.4
2,127,855	-				+1.4
2,127,855	-				-0.3
2,127,855	-				+0.4
2,127,855	-				+0.2
2,127,855	-				+1.1
2,127,855	-				-2.1
2,127,920	-				-1.1
2,127,942	-				+0.6
2,127,970	+				+0.2
2,127,971	-				-0.1
2,127,992	+				+0.8
2,127,992	+				+0.2
2,127,993	-				-0.1
2,127,993	-				-0.2
2,128,095	+				-0.2
2,128,121	-				+1.8
2,128,127	+				-0.6
2,128,140	-				+0.4
2,128,154	-				-0.6
2,128,200	-				-1.2
2,128,252	+		AO353_09690	0.13	-0.8
2,128,279	-		AO353_09690	0.22	-1.8
2,128,280	+		AO353_09690	0.23	-0.1
2,128,281	-		AO353_09690	0.23	-2.9
2,128,281	-		AO353_09690	0.23	-1.7
2,128,338	-		AO353_09690	0.42	-0.6
2,128,382	+		AO353_09690	0.56	-0.6
2,128,509	+				-1.0
2,128,514	+				-0.1
2,128,617	-				-0.6
2,128,637	+				-0.8
2,128,637	+				+0.3
2,128,637	+				+1.8
2,128,637	+				-0.8
2,128,637	+				+1.0
2,128,637	+				-0.6
2,128,637	+				-1.7
2,128,638	-				+0.6
2,128,638	-				-0.9
2,128,638	-				+0.8
2,128,638	-				-2.4
2,129,194	+		AO353_09695	0.56	-0.1
2,129,194	+		AO353_09695	0.56	-0.3
2,129,194	+		AO353_09695	0.56	+0.7
2,129,194	+		AO353_09695	0.56	-1.1
2,129,207	+		AO353_09695	0.57	+1.0
2,129,207	+		AO353_09695	0.57	-0.8
2,129,207	+		AO353_09695	0.57	-0.3
2,129,207	+		AO353_09695	0.57	+1.7
2,129,207	+		AO353_09695	0.57	-0.6
2,129,207	+		AO353_09695	0.57	+1.3
2,129,207	+		AO353_09695	0.57	-0.8
2,129,207	+		AO353_09695	0.57	+1.0
2,129,207	+		AO353_09695	0.57	-2.8
2,129,207	+		AO353_09695	0.57	+1.2
2,129,207	+		AO353_09695	0.57	-1.8
2,129,207	+		AO353_09695	0.57	+0.3
2,129,208	-		AO353_09695	0.57	-0.3
2,129,230	+		AO353_09695	0.59	+1.0
2,129,230	+		AO353_09695	0.59	+0.4
2,129,274	-		AO353_09695	0.63	-1.7
2,129,279	+		AO353_09695	0.63	+0.3
2,129,279	+		AO353_09695	0.63	-0.3
2,129,279	+		AO353_09695	0.63	+1.4
2,129,325	+		AO353_09695	0.68	+0.7
2,129,326	-		AO353_09695	0.68	-2.4
2,129,390	+		AO353_09695	0.74	+0.3
2,129,391	-		AO353_09695	0.74	-1.3
2,129,391	-		AO353_09695	0.74	+1.4
2,129,391	-		AO353_09695	0.74	+0.2
2,129,406	+		AO353_09695	0.75	+0.0
2,129,406	+		AO353_09695	0.75	-1.0
2,129,407	-		AO353_09695	0.75	-0.7
2,129,407	-		AO353_09695	0.75	+1.7
2,129,407	-		AO353_09695	0.75	-0.7
2,129,407	-		AO353_09695	0.75	+1.7
2,129,425	-		AO353_09695	0.77	-0.8
2,129,446	+		AO353_09695	0.79	-1.3
2,129,459	+		AO353_09695	0.80	-0.8
2,129,467	-		AO353_09695	0.81	+0.3
2,129,511	+		AO353_09695	0.85	-1.8