Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09685

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
2,126,216	+				+0.0
2,126,216	+				+0.2
2,126,219	+				-0.8
2,126,259	+				+0.4
2,126,260	-				-0.1
2,126,265	+				-0.2
2,126,331	+				+2.8
2,126,333	+				-0.1
2,126,334	-				-0.2
2,126,362	+				-0.5
2,126,362	+				-0.8
2,126,362	+				+0.8
2,126,362	+				+0.8
2,126,362	+				+1.8
2,126,362	+				-0.2
2,126,362	+				+1.2
2,126,363	-				+1.0
2,126,363	-				-1.5
2,126,363	-				-0.6
2,126,363	-				-0.4
2,126,363	-				-0.2
2,126,363	-				-1.3
2,126,365	+				+0.2
2,126,365	+				-1.9
2,126,365	+				-0.6
2,126,365	+				-2.2
2,126,365	+				-1.2
2,126,365	+				-0.8
2,126,365	+				-0.6
2,126,365	+				+1.8
2,126,365	+				-2.2
2,126,365	+				+2.2
2,126,365	+				+0.8
2,126,365	+				+1.8
2,126,366	-				+0.4
2,126,366	-				-0.2
2,126,366	-				-0.9
2,126,366	-				-1.2
2,126,366	-				-2.1
2,126,366	-				+0.5
2,126,366	-				-1.6
2,126,366	-				-1.8
2,126,366	-				-2.6
2,126,366	-				+0.8
2,126,366	-				-0.8
2,126,366	-				-0.2
2,126,366	-				-1.6
2,126,366	-				-0.6
2,126,366	-				-0.8
2,126,366	-				+0.2
2,126,366	-				+0.8
2,126,366	-				+0.8
2,126,366	-				-0.4
2,126,404	+				-1.4
2,126,409	+				-0.4
2,126,410	-				-0.2
2,126,468	+				-1.8
2,126,468	+				+1.8
2,126,468	+				-0.4
2,126,469	-				+0.2
2,126,469	-				-0.8
2,126,469	-				-0.1
2,126,475	-				-0.2
2,126,475	-				-0.0
2,126,545	-				+0.4
2,126,584	+				-0.8
2,126,584	+				-1.6
2,126,585	-				+0.8
2,126,629	+				-0.1
2,126,629	+				+1.3
2,126,630	-				-1.7
2,126,630	-				-0.4
2,126,630	-				+3.3
2,126,630	-				-1.8
2,126,630	-				-0.1
2,126,630	-				-1.3
2,126,653	+				-1.4
2,126,654	-				+0.2
2,126,654	-				+0.1
2,126,676	+				+1.2
2,127,060	-				+3.8
2,127,060	-				+0.5
2,127,150	-		AO353_09685	0.20	-1.1
2,127,150	-		AO353_09685	0.20	-0.7
2,127,150	-		AO353_09685	0.20	-1.1
2,127,150	-		AO353_09685	0.20	+1.0
2,127,150	-		AO353_09685	0.20	+1.8
2,127,150	-		AO353_09685	0.20	+0.8
2,127,150	-		AO353_09685	0.20	-1.1
2,127,220	+		AO353_09685	0.36	+0.2
2,127,245	+		AO353_09685	0.41	-0.4
2,127,308	+		AO353_09685	0.55	-1.6
2,127,308	+		AO353_09685	0.55	+0.8
2,127,308	+		AO353_09685	0.55	+0.0
2,127,308	+		AO353_09685	0.55	-0.2
2,127,308	+		AO353_09685	0.55	+1.8
2,127,308	+		AO353_09685	0.55	-0.7
2,127,308	+		AO353_09685	0.55	-0.8
2,127,308	+		AO353_09685	0.55	-1.8
2,127,308	+		AO353_09685	0.55	+1.8
2,127,308	+		AO353_09685	0.55	-1.2
2,127,308	+		AO353_09685	0.55	-1.8
2,127,308	+		AO353_09685	0.55	-1.8
2,127,308	+		AO353_09685	0.55	-0.8
2,127,308	+		AO353_09685	0.55	+1.8
2,127,308	+		AO353_09685	0.55	+0.8
2,127,308	+		AO353_09685	0.55	-0.2
2,127,308	+		AO353_09685	0.55	+0.8
2,127,308	+		AO353_09685	0.55	-1.6
2,127,308	+		AO353_09685	0.55	-1.6
2,127,308	+		AO353_09685	0.55	-1.2
2,127,308	+		AO353_09685	0.55	+2.3
2,127,415	+		AO353_09685	0.78	+0.8
2,127,415	+		AO353_09685	0.78	-0.1
2,127,415	+		AO353_09685	0.78	-0.2
2,127,415	+		AO353_09685	0.78	+0.5
2,127,415	+		AO353_09685	0.78	-0.6
2,127,415	+		AO353_09685	0.78	+0.2
2,127,415	+		AO353_09685	0.78	+0.8
2,127,415	+		AO353_09685	0.78	+1.2
2,127,415	+		AO353_09685	0.78	+0.9
2,127,415	+		AO353_09685	0.78	+1.8
2,127,415	+		AO353_09685	0.78	+0.2
2,127,415	+		AO353_09685	0.78	-0.2
2,127,416	-		AO353_09685	0.78	-0.2
2,127,416	-		AO353_09685	0.78	-1.1
2,127,416	-		AO353_09685	0.78	-0.1
2,127,416	-		AO353_09685	0.78	+0.2
2,127,416	-		AO353_09685	0.78	+0.0
2,127,416	-		AO353_09685	0.78	-0.5
2,127,416	-		AO353_09685	0.78	-0.6
2,127,434	+		AO353_09685	0.82	+0.3
2,127,434	+		AO353_09685	0.82	+0.5
2,127,434	+		AO353_09685	0.82	-0.8
2,127,434	+		AO353_09685	0.82	+0.8
2,127,434	+		AO353_09685	0.82	-0.6
2,127,434	+		AO353_09685	0.82	-1.6
2,127,435	-		AO353_09685	0.83	-0.2
2,127,435	-		AO353_09685	0.83	-0.6
2,127,435	-		AO353_09685	0.83	-0.6
2,127,435	-		AO353_09685	0.83	+1.8
2,127,435	-		AO353_09685	0.83	+1.8
2,127,435	-		AO353_09685	0.83	+1.2
2,127,435	-		AO353_09685	0.83	+0.5
2,127,435	-		AO353_09685	0.83	-1.1
2,127,440	+		AO353_09685	0.84	+1.8
2,127,440	+		AO353_09685	0.84	+0.2
2,127,441	-		AO353_09685	0.84	+1.8
2,127,441	-		AO353_09685	0.84	+0.2
2,127,455	+		AO353_09685	0.87	+0.8
2,127,456	-		AO353_09685	0.87	-0.2
2,127,456	-		AO353_09685	0.87	+0.2
2,127,456	-		AO353_09685	0.87	-0.0
2,127,507	-				+0.8
2,127,509	+				+1.8
2,127,509	+				+1.8
2,127,510	-				-0.1
2,127,510	-				+1.8
2,127,510	-				-0.6
2,127,510	-				-1.0
2,127,540	+				+0.0
2,127,540	+				+1.3
2,127,540	+				-0.4
2,127,541	-				-1.7
2,127,541	-				-0.6
2,127,541	-				+0.2
2,127,541	-				-0.6
2,127,541	-				+0.2
2,127,541	-				+0.8
2,127,581	+				+1.8
2,127,582	-				-1.2
2,127,598	+				-0.2
2,127,623	+				+0.9
2,127,623	+				+0.4
2,127,626	+				-0.2
2,127,626	+				-0.2
2,127,626	+				+0.4
2,127,626	+				+0.2
2,127,626	+				+0.3
2,127,626	+				+1.0
2,127,626	+				-1.1
2,127,626	+				+0.8
2,127,626	+				+0.2
2,127,626	+				-0.1
2,127,626	+				+3.3
2,127,626	+				+0.4
2,127,626	+				-1.1
2,127,626	+				-0.4
2,127,626	+				+0.8
2,127,626	+				-1.1
2,127,663	-				+0.8
2,127,689	+				+3.3
2,127,689	+				-0.2
2,127,689	+				+1.1
2,127,690	-				+0.8
2,127,690	-				+1.8
2,127,690	-				-0.7
2,127,690	-				+0.5
2,127,690	-				-1.6
2,127,690	-				-1.6
2,127,690	-				-1.1
2,127,690	-				-0.1
2,127,690	-				-0.2
2,127,690	-				+0.8
2,127,690	-				+0.5
2,127,690	-				+0.8
2,127,707	+				-0.8
2,127,707	+				-0.1
2,127,707	+				+0.2
2,127,708	-				+0.4
2,127,708	-				+0.2
2,127,731	-				+0.8
2,127,773	+				+0.3
2,127,774	-				+0.2
2,127,774	-				+1.8
2,127,774	-				-0.2
2,127,779	+				-0.7
2,127,779	+				+0.2
2,127,779	+				+0.4
2,127,779	+				-0.9
2,127,780	-				-0.0
2,127,780	-				+1.8
2,127,780	-				+0.2
2,127,780	-				+2.1
2,127,780	-				-1.1
2,127,780	-				-0.2
2,127,804	+				+0.2
2,127,804	+				-0.8
2,127,804	+				+2.8
2,127,804	+				+0.1
2,127,804	+				-1.1
2,127,804	+				-3.0
2,127,805	-				+1.0
2,127,805	-				-2.7
2,127,805	-				+0.4
2,127,819	+				-0.2
2,127,820	-				+0.4
2,127,820	-				+1.8
2,127,821	+				+2.3
2,127,821	+				-1.1
2,127,821	+				-1.2
2,127,821	+				-0.9
2,127,821	+				+3.3
2,127,821	+				+2.8
2,127,821	+				+0.2
2,127,821	+				-0.8
2,127,821	+				+2.8
2,127,821	+				+0.2
2,127,821	+				-1.2
2,127,821	+				-0.8
2,127,821	+				+1.8
2,127,821	+				+0.2
2,127,821	+				-0.2
2,127,822	-				+0.3
2,127,822	-				-0.4
2,127,822	-				-1.8
2,127,822	-				+0.2
2,127,822	-				+1.3
2,127,822	-				+3.3
2,127,822	-				+0.8
2,127,822	-				+1.8
2,127,822	-				+1.2
2,127,822	-				-1.6
2,127,846	+				+1.8
2,127,847	-				+1.9
2,127,847	-				+1.8
2,127,854	+				+0.4
2,127,854	+				+0.2
2,127,854	+				-0.8
2,127,854	+				+0.8
2,127,854	+				-1.6
2,127,854	+				-0.2
2,127,854	+				-0.8
2,127,854	+				+1.8
2,127,855	-				+1.4
2,127,855	-				+1.4
2,127,855	-				-0.3
2,127,855	-				+0.4
2,127,855	-				+0.2
2,127,855	-				+1.1
2,127,855	-				-2.1
2,127,920	-				-1.1
2,127,942	-				+0.6
2,127,970	+				+0.2
2,127,971	-				-0.1
2,127,992	+				+0.8
2,127,992	+				+0.2
2,127,993	-				-0.1
2,127,993	-				-0.2
2,128,095	+				-0.2
2,128,121	-				+1.8
2,128,127	+				-0.6
2,128,140	-				+0.4
2,128,154	-				-0.6
2,128,200	-				-1.2
2,128,252	+		AO353_09690	0.13	-0.8
2,128,279	-		AO353_09690	0.22	-1.8
2,128,280	+		AO353_09690	0.23	-0.1
2,128,281	-		AO353_09690	0.23	-2.9
2,128,281	-		AO353_09690	0.23	-1.7
2,128,338	-		AO353_09690	0.42	-0.6
2,128,382	+		AO353_09690	0.56	-0.6
2,128,509	+				-1.0
2,128,514	+				-0.1