Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09265

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
2,031,477	+				+0.9
2,031,477	+				+0.4
2,031,477	+				+0.9
2,031,478	-				-0.7
2,031,478	-				+0.8
2,031,478	-				+0.6
2,031,629	+		AO353_09260	0.26	+1.2
2,031,630	-		AO353_09260	0.26	-0.5
2,031,659	+		AO353_09260	0.30	-1.4
2,031,659	+		AO353_09260	0.30	-2.1
2,031,659	+		AO353_09260	0.30	+1.0
2,031,659	+		AO353_09260	0.30	+0.2
2,031,660	-		AO353_09260	0.30	+0.0
2,031,660	-		AO353_09260	0.30	+1.0
2,031,660	-		AO353_09260	0.30	-1.1
2,031,660	-		AO353_09260	0.30	+0.2
2,031,660	-		AO353_09260	0.30	+0.2
2,031,660	-		AO353_09260	0.30	+0.3
2,031,660	-		AO353_09260	0.30	+0.5
2,031,660	-		AO353_09260	0.30	+0.2
2,031,660	-		AO353_09260	0.30	+1.1
2,031,660	-		AO353_09260	0.30	+0.3
2,031,660	-		AO353_09260	0.30	-0.1
2,031,660	-		AO353_09260	0.30	+0.2
2,031,660	-		AO353_09260	0.30	-0.8
2,031,660	-		AO353_09260	0.30	-0.4
2,031,783	+		AO353_09260	0.47	+0.6
2,031,783	+		AO353_09260	0.47	+1.4
2,031,783	+		AO353_09260	0.47	+0.2
2,031,784	-		AO353_09260	0.47	-0.8
2,031,824	+		AO353_09260	0.53	+3.1
2,031,824	+		AO353_09260	0.53	-1.1
2,031,825	-		AO353_09260	0.53	-0.9
2,031,825	-		AO353_09260	0.53	-0.3
2,031,825	-		AO353_09260	0.53	+0.0
2,031,825	-		AO353_09260	0.53	-0.8
2,031,825	-		AO353_09260	0.53	-0.1
2,031,825	-		AO353_09260	0.53	-0.7
2,031,825	-		AO353_09260	0.53	-1.8
2,031,825	-		AO353_09260	0.53	-1.7
2,031,825	-		AO353_09260	0.53	+1.7
2,031,825	-		AO353_09260	0.53	+1.2
2,031,825	-		AO353_09260	0.53	+1.4
2,031,903	+		AO353_09260	0.64	-1.4
2,031,943	-		AO353_09260	0.69	-0.8
2,031,974	+		AO353_09260	0.74	+1.5
2,031,974	+		AO353_09260	0.74	-1.1
2,032,059	+		AO353_09260	0.85	+1.4
2,032,059	+		AO353_09260	0.85	-0.4
2,032,078	+		AO353_09260	0.88	+0.4
2,032,078	+		AO353_09260	0.88	+0.2
2,032,079	-		AO353_09260	0.88	-0.7
2,032,079	-		AO353_09260	0.88	+0.9
2,032,079	-		AO353_09260	0.88	+1.7
2,032,103	+				+0.6
2,032,103	+				+1.3
2,032,103	+				-0.8
2,032,104	-				+1.7
2,032,104	-				-1.0
2,032,104	-				+1.4
2,032,104	-				-0.3
2,032,104	-				-0.8
2,032,165	-				-0.7
2,032,165	-				-0.7
2,032,179	-				-1.4
2,032,205	+				+1.2
2,032,205	+				+0.0
2,032,205	+				-2.6
2,032,205	+				+1.6
2,032,205	+				+0.1
2,032,206	-				-2.4
2,032,206	-				-0.1
2,032,206	-				-0.2
2,032,206	-				-2.0
2,032,207	+				-1.8
2,032,207	+				+1.7
2,032,208	-				+2.5
2,032,208	-				+0.9
2,032,208	-				+0.2
2,032,237	-				-0.9
2,032,336	+				-0.3
2,032,337	-				-2.1
2,032,337	-				-0.4
2,032,368	+				+1.8
2,032,368	+				-0.2
2,032,368	+				-0.1
2,032,368	+				+1.8
2,032,377	+				+2.1
2,032,377	+				-1.3
2,032,377	+				+0.4
2,032,377	+				+1.8
2,032,428	+				-1.5
2,032,428	+				-1.1
2,032,428	+				-1.6
2,032,428	+				-2.1
2,033,196	+		AO353_09265	0.88	-1.4
2,033,196	+		AO353_09265	0.88	-1.9
2,033,196	+		AO353_09265	0.88	-0.3
2,033,196	+		AO353_09265	0.88	-0.8
2,033,196	+		AO353_09265	0.88	-0.8
2,033,196	+		AO353_09265	0.88	-0.4
2,033,296	+				+0.2
2,033,964	+				+2.5
2,033,964	+				+0.5
2,033,964	+				+0.8
2,033,964	+				-0.6
2,033,964	+				+0.8
2,033,964	+				-0.6
2,033,964	+				-1.0
2,033,964	+				-0.8
2,033,964	+				-0.5
2,033,965	-				-1.5
2,033,965	-				-0.6
2,033,965	-				-0.4
2,033,965	-				-0.1
2,033,972	+				+0.0
2,034,075	+				-0.2
2,034,075	+				-0.3
2,034,075	+				-1.0
2,034,096	+				+0.9
2,034,096	+				+2.1
2,034,096	+				+0.8
2,034,096	+				+0.8
2,034,096	+				+1.2
2,034,096	+				+1.4
2,034,128	+		AO353_09275	0.11	+0.8
2,034,128	+		AO353_09275	0.11	+1.3
2,034,128	+		AO353_09275	0.11	+0.2
2,034,168	+		AO353_09275	0.26	+1.4
2,034,280	+		AO353_09275	0.68	+0.5
2,034,280	+		AO353_09275	0.68	+0.3
2,034,280	+		AO353_09275	0.68	+0.9
2,034,280	+		AO353_09275	0.68	+1.2
2,034,280	+		AO353_09275	0.68	+1.2
2,034,280	+		AO353_09275	0.68	+0.6