Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08995

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
1,974,674	-				-0.0
1,974,674	-				+2.8
1,974,674	-				+1.8
1,974,678	-				+0.5
1,974,678	-				-1.0
1,974,678	-				-1.2
1,974,678	-				-1.4
1,974,678	-				+1.2
1,974,678	-				+0.5
1,974,678	-				-1.4
1,974,678	-				-0.4
1,974,678	-				+2.6
1,974,678	-				+0.2
1,974,689	+				+0.8
1,974,689	+				-1.7
1,974,689	+				-1.8
1,974,690	-				+1.4
1,974,690	-				+0.8
1,974,690	-				+0.8
1,974,690	-				-0.0
1,974,719	+				+0.8
1,974,719	+				-1.0
1,974,719	+				-1.2
1,974,720	-				-0.1
1,974,752	+				+1.5
1,974,753	-				-1.7
1,974,753	-				-2.3
1,974,753	-				-0.6
1,974,794	+				-1.7
1,974,794	+				+0.8
1,974,794	+				-1.0
1,974,794	+				-0.5
1,974,794	+				-1.0
1,974,795	-				-1.0
1,974,795	-				+0.1
1,974,795	-				-2.3
1,974,795	-				-1.8
1,974,795	-				+0.2
1,974,918	+		AO353_08995	0.17	-1.0
1,974,918	+		AO353_08995	0.17	+0.8
1,974,951	+		AO353_08995	0.21	-2.2
1,974,951	+		AO353_08995	0.21	-3.4
1,974,951	+		AO353_08995	0.21	-1.7
1,974,951	+		AO353_08995	0.21	-1.1
1,974,951	+		AO353_08995	0.21	-1.4
1,974,951	+		AO353_08995	0.21	-0.1
1,974,951	+		AO353_08995	0.21	-1.3
1,974,951	+		AO353_08995	0.21	+0.2
1,974,951	+		AO353_08995	0.21	-3.7
1,974,952	-		AO353_08995	0.21	-0.0
1,974,952	-		AO353_08995	0.21	-2.0
1,974,952	-		AO353_08995	0.21	-2.4
1,974,952	-		AO353_08995	0.21	-1.0
1,974,952	-		AO353_08995	0.21	-1.0
1,974,952	-		AO353_08995	0.21	+0.5
1,974,955	+		AO353_08995	0.22	-0.5
1,974,955	+		AO353_08995	0.22	-0.5
1,974,956	-		AO353_08995	0.22	+0.2
1,974,956	-		AO353_08995	0.22	+1.8
1,975,040	+		AO353_08995	0.33	-1.4
1,975,040	+		AO353_08995	0.33	-2.2
1,975,040	+		AO353_08995	0.33	-1.5
1,975,040	+		AO353_08995	0.33	-0.9
1,975,040	+		AO353_08995	0.33	-1.1
1,975,040	+		AO353_08995	0.33	-0.0
1,975,040	+		AO353_08995	0.33	-1.4
1,975,040	+		AO353_08995	0.33	-0.2
1,975,040	+		AO353_08995	0.33	-0.3
1,975,040	+		AO353_08995	0.33	-1.4
1,975,040	+		AO353_08995	0.33	-2.1
1,975,040	+		AO353_08995	0.33	-1.6
1,975,040	+		AO353_08995	0.33	-0.8
1,975,040	+		AO353_08995	0.33	-1.1
1,975,040	+		AO353_08995	0.33	-1.3
1,975,041	-		AO353_08995	0.33	-0.0
1,975,041	-		AO353_08995	0.33	-2.1
1,975,041	-		AO353_08995	0.33	-3.3
1,975,041	-		AO353_08995	0.33	-0.5
1,975,041	-		AO353_08995	0.33	-0.4
1,975,041	-		AO353_08995	0.33	-2.1
1,975,041	-		AO353_08995	0.33	-2.3
1,975,041	-		AO353_08995	0.33	-1.0
1,975,041	-		AO353_08995	0.33	-2.3
1,975,041	-		AO353_08995	0.33	-2.5
1,975,041	-		AO353_08995	0.33	-2.7
1,975,041	-		AO353_08995	0.33	-1.0
1,975,041	-		AO353_08995	0.33	-1.9
1,975,041	-		AO353_08995	0.33	-3.4
1,975,041	-		AO353_08995	0.33	-1.5
1,975,061	+		AO353_08995	0.36	-2.1
1,975,061	+		AO353_08995	0.36	-1.4
1,975,061	+		AO353_08995	0.36	-0.0
1,975,061	+		AO353_08995	0.36	-1.9
1,975,061	+		AO353_08995	0.36	-1.0
1,975,061	+		AO353_08995	0.36	-2.3
1,975,061	+		AO353_08995	0.36	-2.1
1,975,061	+		AO353_08995	0.36	-1.5
1,975,062	-		AO353_08995	0.36	-0.6
1,975,062	-		AO353_08995	0.36	-2.8
1,975,062	-		AO353_08995	0.36	-3.7
1,975,116	+		AO353_08995	0.43	-2.5
1,975,117	-		AO353_08995	0.43	-1.4
1,975,117	-		AO353_08995	0.43	-2.0
1,975,117	-		AO353_08995	0.43	-1.8
1,975,117	-		AO353_08995	0.43	-2.4
1,975,229	-		AO353_08995	0.58	-1.3
1,975,245	-		AO353_08995	0.61	-2.1
1,975,245	-		AO353_08995	0.61	-2.0
1,975,351	+		AO353_08995	0.75	-0.0
1,975,351	+		AO353_08995	0.75	-1.1
1,975,351	+		AO353_08995	0.75	-1.0
1,975,351	+		AO353_08995	0.75	-1.8
1,975,352	-		AO353_08995	0.75	-4.1
1,975,352	-		AO353_08995	0.75	-2.5
1,975,463	+		AO353_08995	0.90	-1.4
1,975,463	+		AO353_08995	0.90	-0.5
1,975,463	+		AO353_08995	0.90	-0.0
1,975,463	+		AO353_08995	0.90	-1.5
1,975,463	+		AO353_08995	0.90	+0.2
1,975,464	-		AO353_08995	0.90	-0.8
1,975,464	-		AO353_08995	0.90	-2.2
1,975,464	-		AO353_08995	0.90	-0.8
1,975,464	-		AO353_08995	0.90	-2.2
1,975,464	-		AO353_08995	0.90	-1.5
1,975,539	+				-1.7
1,975,539	+				-2.1
1,975,540	-				-2.2
1,975,540	-				-2.6
1,975,540	-				-0.2
1,975,540	-				-0.8
1,975,577	-				+1.8
1,975,581	+				-1.1
1,975,581	+				-0.2
1,975,582	-				-1.3
1,975,619	+				+0.2
1,975,620	-				-1.5
1,975,620	-				-1.5
1,975,620	-				-0.8
1,975,626	-				-2.5
1,975,626	-				+0.2
1,975,649	+				-1.2
1,975,649	+				-1.0
1,975,650	-				+1.8
1,975,664	+				-0.2
1,975,664	+				-2.0
1,975,664	+				-1.2
1,975,664	+				-0.1
1,975,664	+				-1.4
1,975,664	+				-0.8
1,975,664	+				+0.8
1,975,664	+				-1.8
1,975,664	+				-0.5
1,975,664	+				-1.0
1,975,664	+				+1.2
1,975,664	+				+0.8
1,975,664	+				-1.3
1,975,665	-				+0.8
1,975,665	-				+0.8
1,975,665	-				+0.8
1,975,665	-				+0.2
1,975,665	-				-0.7
1,975,665	-				+1.8
1,975,665	-				+0.8
1,975,665	-				+2.4
1,975,665	-				-1.0
1,975,665	-				-1.7
1,975,665	-				+1.2
1,975,665	-				+1.8
1,975,668	+				-3.0
1,975,668	+				-0.2
1,975,668	+				-1.9
1,975,668	+				-1.4
1,975,668	+				-2.1
1,975,720	+				-1.7
1,975,733	+				-1.4
1,975,734	-				-0.4
1,975,734	-				-0.1
1,975,734	-				+0.9
1,975,734	-				+1.8
1,975,734	-				+0.2
1,975,740	+				-1.7
1,975,740	+				+1.2
1,975,740	+				-0.8
1,975,740	+				-0.8
1,975,740	+				-0.8
1,975,740	+				-0.8
1,975,740	+				-2.1
1,975,741	-				-0.4
1,975,741	-				+0.3
1,975,741	-				+0.6
1,975,741	-				+0.8
1,975,741	-				-1.0
1,975,741	-				-0.8
1,975,741	-				-0.2
1,975,741	-				+1.0
1,975,741	-				-0.2
1,975,741	-				-1.7
1,975,741	-				-1.2
1,975,741	-				+0.8
1,975,741	-				-0.6
1,975,741	-				-1.2
1,975,759	+				+0.8
1,975,759	+				-1.6
1,975,759	+				-0.8
1,975,759	+				-0.5
1,975,759	+				-0.4
1,975,759	+				-0.8
1,975,759	+				-1.1
1,975,759	+				+1.4
1,975,759	+				-2.8
1,975,759	+				-0.0
1,975,759	+				-0.2
1,975,759	+				-2.4
1,975,759	+				-1.2
1,975,759	+				+0.2
1,975,759	+				-0.8
1,975,759	+				-0.5
1,975,759	+				-1.5
1,975,759	+				-2.5
1,975,759	+				-0.8
1,975,759	+				-0.2
1,975,759	+				-1.2
1,975,759	+				-1.3
1,975,760	-				+1.8
1,975,760	-				+2.8
1,975,760	-				+2.8
1,975,760	-				+1.8
1,975,760	-				+0.8
1,975,760	-				+1.8
1,975,760	-				+1.2
1,975,760	-				+1.5
1,975,760	-				+0.8
1,975,760	-				+0.2
1,975,760	-				+3.8
1,975,760	-				+0.8
1,975,760	-				+1.8
1,975,760	-				+1.8
1,975,760	-				+0.8
1,975,760	-				+0.2
1,975,760	-				+3.4
1,975,760	-				+3.4
1,975,760	-				-0.5
1,975,760	-				+3.2
1,975,761	+				-0.8
1,975,761	+				-1.5
1,975,761	+				+0.8
1,975,761	+				+1.8
1,975,761	+				-2.3
1,975,761	+				-0.8
1,975,761	+				-1.0
1,975,761	+				-1.7
1,975,761	+				+0.8
1,975,762	-				+1.8
1,975,762	-				+0.8
1,975,763	+				-2.7
1,975,763	+				+1.1
1,975,763	+				+1.8
1,975,763	+				-0.8
1,975,763	+				-1.0
1,975,763	+				-0.5
1,975,763	+				-0.3
1,975,763	+				+0.8
1,975,763	+				-0.2
1,975,763	+				-0.2
1,975,763	+				-1.7
1,975,763	+				-1.5
1,975,763	+				+2.8
1,975,763	+				-0.6
1,975,763	+				-0.8
1,975,763	+				-0.8
1,975,764	-				+2.4
1,975,764	-				-1.4
1,975,764	-				+2.8
1,975,764	-				-0.0
1,975,764	-				+0.2
1,975,764	-				-0.2
1,975,764	-				+1.8
1,975,764	-				+0.5
1,975,764	-				+3.4
1,975,764	-				-0.1
1,975,846	+				-1.7
1,975,846	+				-1.4
1,975,846	+				+0.8
1,975,847	-				+0.2
1,975,847	-				+0.6
1,975,847	-				+1.1
1,975,847	-				+0.6
1,975,847	-				+1.8
1,975,847	-				+3.4
1,975,847	-				+1.8
1,975,847	-				+1.2
1,975,883	+				-1.3
1,975,883	+				+0.5
1,975,884	-				+2.2
1,975,884	-				-0.8
1,975,884	-				+0.8
1,975,884	-				+0.2
1,975,893	+				-0.5
1,975,893	+				+2.0
1,975,894	-				+1.8
1,975,894	-				+2.8
1,975,918	+				-0.8
1,975,919	-				+1.8
1,975,932	+				+1.8
1,975,933	-				+0.8
1,975,933	-				+2.1
1,975,933	-				+0.2
1,975,933	-				+0.6
1,975,933	-				+1.8
1,975,933	-				+0.8
1,975,933	-				+1.4
1,975,933	-				+1.8
1,975,982	+				-1.1
1,975,982	+				-2.5
1,975,982	+				+0.2
1,975,982	+				-1.0
1,975,982	+				-0.8
1,975,982	+				-1.1
1,975,982	+				-1.4
1,975,982	+				+0.2
1,975,982	+				+0.8
1,975,983	-				-0.2
1,975,983	-				+2.5
1,975,983	-				+2.8
1,975,985	+				-1.5
1,975,986	-				-0.2
1,976,001	+				+0.8
1,976,001	+				-0.5
1,976,390	+		AO353_09000	0.25	+1.8
1,976,391	-		AO353_09000	0.25	+1.8