Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08940

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
1,962,895	+		AO353_08930	0.68	+1.8
1,962,932	+		AO353_08930	0.74	-3.1
1,962,932	+		AO353_08930	0.74	-0.5
1,962,932	+		AO353_08930	0.74	+1.2
1,962,933	-		AO353_08930	0.74	+0.8
1,962,980	+		AO353_08930	0.82	+0.5
1,962,980	+		AO353_08930	0.82	+0.9
1,962,980	+		AO353_08930	0.82	+1.4
1,962,980	+		AO353_08930	0.82	-2.5
1,962,981	-		AO353_08930	0.82	-0.2
1,962,981	-		AO353_08930	0.82	+0.9
1,962,995	+		AO353_08930	0.85	+0.8
1,962,995	+		AO353_08930	0.85	-1.0
1,963,082	+				-0.2
1,963,193	+		AO353_08935	0.14	+1.4
1,963,193	+		AO353_08935	0.14	-0.3
1,963,193	+		AO353_08935	0.14	+0.8
1,963,193	+		AO353_08935	0.14	-1.0
1,963,193	+		AO353_08935	0.14	-2.2
1,963,193	+		AO353_08935	0.14	+0.2
1,963,193	+		AO353_08935	0.14	+2.8
1,963,193	+		AO353_08935	0.14	-1.5
1,963,193	+		AO353_08935	0.14	-0.0
1,963,193	+		AO353_08935	0.14	-1.0
1,963,193	+		AO353_08935	0.14	-0.2
1,963,193	+		AO353_08935	0.14	+0.8
1,963,193	+		AO353_08935	0.14	-0.7
1,963,193	+		AO353_08935	0.14	+1.4
1,963,193	+		AO353_08935	0.14	-1.9
1,963,193	+		AO353_08935	0.14	-0.5
1,963,193	+		AO353_08935	0.14	-0.5
1,963,193	+		AO353_08935	0.14	+0.5
1,963,193	+		AO353_08935	0.14	-1.0
1,963,193	+		AO353_08935	0.14	-0.5
1,963,193	+		AO353_08935	0.14	-1.7
1,963,193	+		AO353_08935	0.14	+1.8
1,963,193	+		AO353_08935	0.14	+1.2
1,963,194	-		AO353_08935	0.14	-0.5
1,963,194	-		AO353_08935	0.14	-0.9
1,963,194	-		AO353_08935	0.14	-0.0
1,963,194	-		AO353_08935	0.14	+3.4
1,963,194	-		AO353_08935	0.14	+1.8
1,963,194	-		AO353_08935	0.14	-0.1
1,963,194	-		AO353_08935	0.14	+0.8
1,963,194	-		AO353_08935	0.14	-1.5
1,963,194	-		AO353_08935	0.14	+0.5
1,963,194	-		AO353_08935	0.14	+1.1
1,963,194	-		AO353_08935	0.14	-1.0
1,963,194	-		AO353_08935	0.14	-0.2
1,963,194	-		AO353_08935	0.14	-0.2
1,963,194	-		AO353_08935	0.14	+1.8
1,963,194	-		AO353_08935	0.14	-0.5
1,963,194	-		AO353_08935	0.14	+1.8
1,963,194	-		AO353_08935	0.14	-0.1
1,963,194	-		AO353_08935	0.14	+1.8
1,963,194	-		AO353_08935	0.14	+0.2
1,963,194	-		AO353_08935	0.14	-0.4
1,963,194	-		AO353_08935	0.14	-0.5
1,963,194	-		AO353_08935	0.14	-2.0
1,963,194	-		AO353_08935	0.14	+1.5
1,963,194	-		AO353_08935	0.14	-0.8
1,963,194	-		AO353_08935	0.14	-1.5
1,963,239	-		AO353_08935	0.20	+0.4
1,963,239	-		AO353_08935	0.20	-0.9
1,963,239	-		AO353_08935	0.20	-0.2
1,963,239	-		AO353_08935	0.20	-0.5
1,963,239	-		AO353_08935	0.20	-0.2
1,963,239	-		AO353_08935	0.20	+0.2
1,963,239	-		AO353_08935	0.20	-1.7
1,963,262	+		AO353_08935	0.23	+0.5
1,963,262	+		AO353_08935	0.23	+2.4
1,963,263	-		AO353_08935	0.24	+0.8
1,963,263	-		AO353_08935	0.24	-0.0
1,963,263	-		AO353_08935	0.24	+0.2
1,963,263	-		AO353_08935	0.24	-0.5
1,963,289	+		AO353_08935	0.27	+1.0
1,963,289	+		AO353_08935	0.27	+0.2
1,963,289	+		AO353_08935	0.27	+0.8
1,963,289	+		AO353_08935	0.27	+0.7
1,963,289	+		AO353_08935	0.27	-0.6
1,963,289	+		AO353_08935	0.27	+0.2
1,963,289	+		AO353_08935	0.27	-0.8
1,963,289	+		AO353_08935	0.27	+0.2
1,963,289	+		AO353_08935	0.27	-2.0
1,963,289	+		AO353_08935	0.27	+0.8
1,963,289	+		AO353_08935	0.27	-1.1
1,963,289	+		AO353_08935	0.27	-1.5
1,963,289	+		AO353_08935	0.27	+1.2
1,963,289	+		AO353_08935	0.27	-0.2
1,963,289	+		AO353_08935	0.27	-0.2
1,963,290	-		AO353_08935	0.27	-1.9
1,963,290	-		AO353_08935	0.27	+0.8
1,963,290	-		AO353_08935	0.27	+0.5
1,963,290	-		AO353_08935	0.27	-1.0
1,963,290	-		AO353_08935	0.27	-0.7
1,963,290	-		AO353_08935	0.27	-0.2
1,963,290	-		AO353_08935	0.27	+0.2
1,963,290	-		AO353_08935	0.27	-0.2
1,963,290	-		AO353_08935	0.27	-1.2
1,963,290	-		AO353_08935	0.27	-1.2
1,963,290	-		AO353_08935	0.27	+1.3
1,963,290	-		AO353_08935	0.27	+0.5
1,963,290	-		AO353_08935	0.27	+1.0
1,963,290	-		AO353_08935	0.27	+1.4
1,963,290	-		AO353_08935	0.27	-0.2
1,963,290	-		AO353_08935	0.27	-1.8
1,963,290	-		AO353_08935	0.27	-1.2
1,963,292	-		AO353_08935	0.27	+0.6
1,963,383	-		AO353_08935	0.40	-2.3
1,963,383	-		AO353_08935	0.40	-0.4
1,963,409	+		AO353_08935	0.43	-0.4
1,963,410	-		AO353_08935	0.43	-1.7
1,963,410	-		AO353_08935	0.43	-0.0
1,963,442	+		AO353_08935	0.48	-1.0
1,963,442	+		AO353_08935	0.48	-0.8
1,963,442	+		AO353_08935	0.48	+1.8
1,963,442	+		AO353_08935	0.48	-0.2
1,963,442	+		AO353_08935	0.48	+0.2
1,963,442	+		AO353_08935	0.48	+1.8
1,963,442	+		AO353_08935	0.48	+0.2
1,963,442	+		AO353_08935	0.48	-0.7
1,963,442	+		AO353_08935	0.48	-0.8
1,963,442	+		AO353_08935	0.48	-0.2
1,963,443	-		AO353_08935	0.48	-0.8
1,963,443	-		AO353_08935	0.48	+0.2
1,963,457	+		AO353_08935	0.50	-1.9
1,963,457	+		AO353_08935	0.50	-0.4
1,963,457	+		AO353_08935	0.50	+0.8
1,963,457	+		AO353_08935	0.50	-0.8
1,963,457	+		AO353_08935	0.50	-0.5
1,963,458	-		AO353_08935	0.50	-0.2
1,963,458	-		AO353_08935	0.50	+1.2
1,963,458	-		AO353_08935	0.50	+1.8
1,963,458	-		AO353_08935	0.50	-0.2
1,963,458	-		AO353_08935	0.50	-1.1
1,963,458	-		AO353_08935	0.50	-2.3
1,963,458	-		AO353_08935	0.50	-0.5
1,963,458	-		AO353_08935	0.50	+0.8
1,963,529	+		AO353_08935	0.59	+0.6
1,963,529	+		AO353_08935	0.59	-0.2
1,963,529	+		AO353_08935	0.59	+0.5
1,963,530	-		AO353_08935	0.59	+0.2
1,963,530	-		AO353_08935	0.59	+0.8
1,963,689	+		AO353_08935	0.81	+1.5
1,963,689	+		AO353_08935	0.81	+0.2
1,963,689	+		AO353_08935	0.81	-0.9
1,963,689	+		AO353_08935	0.81	+1.6
1,963,689	+		AO353_08935	0.81	-2.9
1,963,689	+		AO353_08935	0.81	+1.8
1,963,690	-		AO353_08935	0.81	-1.7
1,963,690	-		AO353_08935	0.81	-0.0
1,963,690	-		AO353_08935	0.81	+1.8
1,963,690	-		AO353_08935	0.81	-0.2
1,963,690	-		AO353_08935	0.81	-0.7
1,963,690	-		AO353_08935	0.81	+1.0
1,963,690	-		AO353_08935	0.81	-1.0
1,963,690	-		AO353_08935	0.81	-0.2
1,963,792	+				-0.9
1,963,819	+				-0.0
1,963,829	+				+1.8
1,963,830	-				-1.4
1,963,830	-				+0.2
1,963,830	-				-1.8
1,963,833	+				+0.2
1,963,833	+				+0.8
1,963,833	+				+1.8
1,963,833	+				+0.2
1,963,833	+				-0.2
1,963,833	+				-0.2
1,963,833	+				+1.2
1,963,834	-				+0.8
1,963,834	-				-2.5
1,963,834	-				+0.2
1,963,834	-				-0.0
1,963,834	-				+2.6
1,963,834	-				+0.4
1,963,896	+				-0.2
1,963,896	+				-0.2
1,963,896	+				-0.3
1,963,896	+				+0.2
1,963,896	+				-0.4
1,963,897	-				+0.5
1,963,897	-				-0.8
1,963,897	-				-1.0
1,963,897	-				-0.2
1,963,897	-				-1.5
1,963,897	-				+0.9
1,963,897	-				-1.0
1,963,897	-				+1.8
1,963,898	+				-1.2
1,963,899	-				-0.1
1,963,899	-				+1.4
1,963,899	-				-0.4
1,963,960	+		AO353_08940	0.10	+0.9
1,963,960	+		AO353_08940	0.10	+1.8
1,963,960	+		AO353_08940	0.10	-0.4
1,963,960	+		AO353_08940	0.10	-1.0
1,963,960	+		AO353_08940	0.10	+1.0
1,963,960	+		AO353_08940	0.10	-1.8
1,963,961	-		AO353_08940	0.10	-0.6
1,963,961	-		AO353_08940	0.10	-1.4
1,963,961	-		AO353_08940	0.10	-0.2
1,964,006	+		AO353_08940	0.18	+2.7
1,964,007	-		AO353_08940	0.18	+0.5
1,964,007	-		AO353_08940	0.18	-1.5
1,964,007	-		AO353_08940	0.18	-1.2
1,964,007	-		AO353_08940	0.18	+0.2
1,964,026	+		AO353_08940	0.21	-1.2
1,964,029	-		AO353_08940	0.21	+0.2
1,964,082	+		AO353_08940	0.30	+0.8
1,964,082	+		AO353_08940	0.30	-0.7
1,964,082	+		AO353_08940	0.30	+0.8
1,964,083	-		AO353_08940	0.30	+3.8
1,964,083	-		AO353_08940	0.30	+0.2
1,964,141	+		AO353_08940	0.39	+2.2
1,964,141	+		AO353_08940	0.39	+0.2
1,964,141	+		AO353_08940	0.39	-0.0
1,964,141	+		AO353_08940	0.39	-1.0
1,964,142	-		AO353_08940	0.39	+0.8
1,964,142	-		AO353_08940	0.39	-1.0
1,964,152	+		AO353_08940	0.41	+0.0
1,964,152	+		AO353_08940	0.41	-1.6
1,964,152	+		AO353_08940	0.41	-0.9
1,964,152	+		AO353_08940	0.41	-0.7
1,964,153	-		AO353_08940	0.41	+0.8
1,964,153	-		AO353_08940	0.41	-0.5
1,964,153	-		AO353_08940	0.41	+0.8
1,964,274	+		AO353_08940	0.60	-1.4
1,964,274	+		AO353_08940	0.60	+0.5
1,964,274	+		AO353_08940	0.60	-0.5
1,964,274	+		AO353_08940	0.60	+0.2
1,964,275	-		AO353_08940	0.60	-0.3
1,964,275	-		AO353_08940	0.60	-0.8
1,964,275	-		AO353_08940	0.60	-1.8
1,964,275	-		AO353_08940	0.60	+3.8
1,964,275	-		AO353_08940	0.60	-0.3
1,964,283	+		AO353_08940	0.61	-0.9
1,964,283	+		AO353_08940	0.61	+0.6
1,964,284	-		AO353_08940	0.61	+0.2
1,964,284	-		AO353_08940	0.61	-0.8
1,964,284	-		AO353_08940	0.61	+1.8
1,964,284	-		AO353_08940	0.61	+1.8
1,964,310	+		AO353_08940	0.66	-1.7
1,964,310	+		AO353_08940	0.66	+0.4
1,964,310	+		AO353_08940	0.66	+3.4
1,964,310	+		AO353_08940	0.66	+0.8
1,964,311	-		AO353_08940	0.66	+1.2
1,964,311	-		AO353_08940	0.66	-0.6
1,964,427	+		AO353_08940	0.84	+1.2
1,964,427	+		AO353_08940	0.84	-1.8
1,964,455	+		AO353_08940	0.88	+0.2
1,964,455	+		AO353_08940	0.88	+0.2
1,964,455	+		AO353_08940	0.88	+0.0
1,964,455	+		AO353_08940	0.88	-0.1
1,964,455	+		AO353_08940	0.88	-0.0
1,964,456	-		AO353_08940	0.89	+0.8
1,964,456	-		AO353_08940	0.89	+0.8
1,964,456	-		AO353_08940	0.89	-0.1
1,964,456	-		AO353_08940	0.89	+0.8
1,964,456	-		AO353_08940	0.89	-0.0
1,964,456	-		AO353_08940	0.89	+0.8
1,964,553	+				+0.8
1,964,553	+				+1.0
1,964,553	+				+0.2
1,964,553	+				+1.3
1,964,553	+				-0.5
1,964,553	+				+1.2
1,964,553	+				+2.8
1,964,553	+				+0.2
1,964,553	+				-1.1
1,964,554	-				+0.5
1,964,554	-				+0.2
1,964,554	-				-0.6
1,964,554	-				-0.2
1,964,554	-				-0.7
1,964,554	-				-0.2
1,964,554	-				+1.2
1,964,561	+				+1.0
1,964,561	+				+0.8
1,964,561	+				+1.2
1,964,561	+				+0.2
1,964,561	+				-0.3
1,964,561	+				-1.1
1,964,562	-				+0.8
1,964,562	-				-0.8
1,964,562	-				+0.8
1,964,566	+				-0.0
1,964,566	+				-2.0
1,964,566	+				-0.1
1,964,566	+				-0.0
1,964,566	+				-0.2
1,964,566	+				+0.4
1,964,567	-				+0.8
1,964,567	-				+0.8
1,964,645	+				+0.2
1,964,645	+				+0.5
1,964,645	+				-0.5
1,964,645	+				-0.5
1,964,646	-				+0.8
1,964,646	-				-1.2
1,964,693	-				+1.0
1,964,693	-				+1.5
1,965,084	-		AO353_08945	0.19	+1.2
1,965,084	-		AO353_08945	0.19	+1.0
1,965,084	-		AO353_08945	0.19	+0.8
1,965,084	-		AO353_08945	0.19	-0.2
1,965,141	+		AO353_08945	0.22	+2.4
1,965,141	+		AO353_08945	0.22	+1.2
1,965,142	-		AO353_08945	0.22	-0.1
1,965,142	-		AO353_08945	0.22	+0.0
1,965,491	+		AO353_08945	0.41	+0.8