Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08490

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
1,865,737	+		AO353_08485	0.62	-0.2
1,865,738	-		AO353_08485	0.62	-2.1
1,865,738	-		AO353_08485	0.62	-0.8
1,865,738	-		AO353_08485	0.62	-0.4
1,865,738	-		AO353_08485	0.62	-1.2
1,865,738	-		AO353_08485	0.62	-0.5
1,865,746	+		AO353_08485	0.63	+0.8
1,865,747	-		AO353_08485	0.63	-0.8
1,865,747	-		AO353_08485	0.63	+0.2
1,865,747	-		AO353_08485	0.63	-1.8
1,865,747	-		AO353_08485	0.63	-0.8
1,865,747	-		AO353_08485	0.63	-1.0
1,865,747	-		AO353_08485	0.63	-1.0
1,865,875	+		AO353_08485	0.71	-1.0
1,865,876	-		AO353_08485	0.71	+1.8
1,865,887	+		AO353_08485	0.72	+1.8
1,865,887	+		AO353_08485	0.72	-0.0
1,865,887	+		AO353_08485	0.72	-1.5
1,865,887	+		AO353_08485	0.72	+0.8
1,865,887	+		AO353_08485	0.72	-1.0
1,865,887	+		AO353_08485	0.72	-0.4
1,865,887	+		AO353_08485	0.72	-1.9
1,865,888	-		AO353_08485	0.72	-1.7
1,865,888	-		AO353_08485	0.72	-1.1
1,865,888	-		AO353_08485	0.72	-1.8
1,865,888	-		AO353_08485	0.72	+1.8
1,865,888	-		AO353_08485	0.72	-1.0
1,865,888	-		AO353_08485	0.72	+0.6
1,865,888	-		AO353_08485	0.72	-1.0
1,865,888	-		AO353_08485	0.72	+2.8
1,865,888	-		AO353_08485	0.72	-1.7
1,865,888	-		AO353_08485	0.72	-2.1
1,865,888	-		AO353_08485	0.72	+0.8
1,865,893	+		AO353_08485	0.72	+1.5
1,865,893	+		AO353_08485	0.72	-1.0
1,865,893	+		AO353_08485	0.72	-0.8
1,865,893	+		AO353_08485	0.72	-0.4
1,865,893	+		AO353_08485	0.72	-0.3
1,865,893	+		AO353_08485	0.72	+0.2
1,865,894	-		AO353_08485	0.72	-0.2
1,865,894	-		AO353_08485	0.72	+0.8
1,865,894	-		AO353_08485	0.72	-0.9
1,865,894	-		AO353_08485	0.72	+0.8
1,865,894	-		AO353_08485	0.72	-0.2
1,865,894	-		AO353_08485	0.72	+0.4
1,865,894	-		AO353_08485	0.72	+0.8
1,865,923	+		AO353_08485	0.74	-1.3
1,865,923	+		AO353_08485	0.74	-0.2
1,865,961	+		AO353_08485	0.77	+0.2
1,865,961	+		AO353_08485	0.77	-0.5
1,865,961	+		AO353_08485	0.77	-1.0
1,865,961	+		AO353_08485	0.77	+0.2
1,865,962	-		AO353_08485	0.77	-0.2
1,865,962	-		AO353_08485	0.77	+1.0
1,865,962	-		AO353_08485	0.77	-0.7
1,865,962	-		AO353_08485	0.77	-0.5
1,865,962	-		AO353_08485	0.77	+1.8
1,865,962	-		AO353_08485	0.77	-0.5
1,865,962	-		AO353_08485	0.77	-0.5
1,865,962	-		AO353_08485	0.77	-0.8
1,865,962	-		AO353_08485	0.77	-0.2
1,866,145	+		AO353_08485	0.89	-1.0
1,866,145	+		AO353_08485	0.89	-1.0
1,866,145	+		AO353_08485	0.89	-0.4
1,866,145	+		AO353_08485	0.89	-0.2
1,866,145	+		AO353_08485	0.89	+0.8
1,866,145	+		AO353_08485	0.89	-0.8
1,866,145	+		AO353_08485	0.89	+1.8
1,866,145	+		AO353_08485	0.89	-0.8
1,866,146	-		AO353_08485	0.89	+0.2
1,866,146	-		AO353_08485	0.89	-1.7
1,866,146	-		AO353_08485	0.89	-2.5
1,866,255	+				-0.8
1,866,256	-				-0.0
1,866,268	+				-1.2
1,866,269	-				-2.5
1,866,269	-				+0.5
1,866,298	+				-1.4
1,866,298	+				-1.4
1,866,298	+				-1.8
1,866,298	+				+1.8
1,866,298	+				+0.8
1,866,298	+				-1.4
1,866,298	+				+1.2
1,866,299	-				-1.0
1,866,299	-				-0.5
1,866,299	-				-0.2
1,866,299	-				-0.2
1,866,299	-				-0.1
1,866,299	-				-0.1
1,866,353	+				+0.5
1,866,353	+				+1.8
1,866,396	+				+1.8
1,866,397	-				-0.2
1,866,462	+				+0.8
1,866,462	+				+0.5
1,866,462	+				-0.2
1,866,462	+				-0.8
1,866,463	-				-0.8
1,866,463	-				-1.1
1,866,463	-				-1.2
1,866,463	-				-0.7
1,866,463	-				-1.9
1,866,496	-				+0.8
1,866,496	-				+0.2
1,866,496	-				-0.5
1,866,505	-				-0.8
1,866,559	+				+0.2
1,866,559	+				-2.2
1,866,559	+				+1.8
1,866,559	+				-0.8
1,866,559	+				-0.5
1,866,559	+				+1.5
1,866,559	+				-2.0
1,866,559	+				-0.5
1,866,559	+				-0.5
1,866,559	+				-1.5
1,866,559	+				+1.8
1,866,559	+				-2.4
1,866,559	+				-0.2
1,866,559	+				-0.5
1,866,559	+				+1.8
1,866,559	+				+0.8
1,866,559	+				-0.0
1,866,559	+				+0.8
1,866,559	+				+1.8
1,866,559	+				-0.0
1,866,559	+				-0.9
1,866,559	+				-0.2
1,866,559	+				-2.2
1,866,559	+				-2.0
1,866,559	+				-0.3
1,866,559	+				-0.3
1,866,559	+				+2.8
1,866,559	+				+0.6
1,866,559	+				-1.0
1,866,559	+				-0.0
1,866,560	-				+0.2
1,866,560	-				-1.4
1,866,560	-				-0.5
1,866,560	-				+0.2
1,866,560	-				-0.1
1,866,560	-				-2.5
1,866,560	-				-1.2
1,866,560	-				-1.1
1,866,560	-				-1.4
1,866,560	-				-1.5
1,866,560	-				+0.1
1,866,560	-				-1.7
1,866,560	-				+0.8
1,866,560	-				+0.2
1,866,560	-				-0.1
1,866,560	-				-0.9
1,866,560	-				+0.2
1,866,560	-				-1.2
1,866,560	-				-0.3
1,866,560	-				-1.2
1,866,560	-				+1.2
1,866,560	-				-1.7
1,866,560	-				+0.8
1,866,560	-				-0.5
1,866,560	-				-1.4
1,866,560	-				-0.5
1,866,560	-				-0.4
1,866,560	-				+1.0
1,866,560	-				-0.4
1,866,560	-				+0.1
1,866,560	-				+1.0
1,866,560	-				-1.3
1,866,560	-				-1.3
1,866,560	-				-1.3
1,866,560	-				-0.2
1,866,560	-				+0.2
1,866,563	+				+0.8
1,866,563	+				-1.2
1,866,563	+				-0.7
1,866,563	+				+0.3
1,866,563	+				+0.2
1,866,563	+				+0.8
1,866,563	+				-0.5
1,866,563	+				-0.5
1,866,563	+				-1.0
1,866,563	+				+0.2
1,866,563	+				-0.9
1,866,563	+				-0.5
1,866,563	+				-0.8
1,866,563	+				-0.8
1,866,563	+				+0.4
1,866,563	+				+0.6
1,866,563	+				+1.2
1,866,563	+				-0.0
1,866,563	+				-0.1
1,866,563	+				-1.2
1,866,563	+				-1.5
1,866,563	+				-0.0
1,866,563	+				-0.7
1,866,563	+				-0.9
1,866,563	+				+1.8
1,866,564	-				-0.4
1,866,564	-				-1.2
1,866,564	-				+0.1
1,866,564	-				-1.3
1,866,564	-				-2.1
1,866,564	-				-0.0
1,866,564	-				-0.2
1,866,564	-				-1.2
1,866,564	-				-1.2
1,866,564	-				-1.8
1,866,564	-				+1.1
1,866,564	-				-0.7
1,866,564	-				-0.8
1,866,564	-				-1.0
1,866,564	-				-0.5
1,866,564	-				-1.5
1,866,564	-				-1.2
1,866,564	-				+0.2
1,866,564	-				-1.3
1,866,564	-				+0.2
1,866,564	-				-0.5
1,866,564	-				-0.2
1,866,564	-				+1.5
1,866,607	+				-0.0
1,866,607	+				+0.4
1,866,607	+				-0.5
1,866,607	+				+1.0
1,866,607	+				-0.8
1,866,607	+				+0.2
1,866,607	+				-0.2
1,866,607	+				-1.5
1,866,607	+				+0.2
1,866,607	+				+1.0
1,866,607	+				-0.5
1,866,607	+				+0.8
1,866,608	-				+0.3
1,866,608	-				-0.8
1,866,608	-				+1.8
1,866,608	-				+1.8
1,866,608	-				+1.2
1,866,608	-				-0.5
1,866,608	-				+1.8
1,866,608	-				+1.8
1,866,608	-				-0.8
1,866,608	-				+0.2
1,866,608	-				-0.8
1,866,608	-				-1.4
1,866,608	-				-0.5
1,866,609	+				+1.8
1,866,609	+				-0.3
1,866,609	+				-0.2
1,866,609	+				-1.2
1,867,324	+				-0.9
1,867,324	+				-1.4
1,867,324	+				+0.6
1,867,324	+				-0.0
1,867,324	+				-1.0
1,867,324	+				-1.0
1,867,324	+				-0.2
1,867,325	-				-0.8
1,867,325	-				+0.2
1,867,447	-				-1.8
1,867,447	-				-1.5
1,867,447	-				+0.2
1,867,525	+				-2.3
1,867,525	+				-0.7
1,867,525	+				-1.2
1,867,525	+				-0.7
1,867,526	-				+1.0
1,867,526	-				+0.8
1,867,552	+				-0.5
1,867,552	+				-0.2
1,867,553	-				-2.1
1,867,553	-				+1.0
1,867,553	-				+0.0
1,867,553	-				-1.0
1,867,553	-				-0.5
1,867,553	-				-1.8
1,867,553	-				-0.8
1,867,553	-				-1.0
1,867,553	-				-0.8
1,867,553	-				-0.5
1,867,553	-				+0.8
1,867,579	+				-0.2
1,867,579	+				-0.8
1,867,579	+				-1.2
1,867,579	+				-0.5
1,867,579	+				+2.2
1,867,579	+				+1.3
1,867,579	+				-0.8
1,867,579	+				-1.2
1,867,579	+				-0.2
1,867,580	-				-0.2
1,867,580	-				-0.2
1,867,580	-				-1.0
1,867,580	-				-1.5
1,867,580	-				-0.4
1,867,580	-				-0.1
1,867,580	-				+0.4
1,867,580	-				-1.0
1,867,731	+		AO353_08495	0.22	-0.3
1,867,731	+		AO353_08495	0.22	+0.2
1,867,731	+		AO353_08495	0.22	-0.1
1,867,731	+		AO353_08495	0.22	-1.4
1,867,731	+		AO353_08495	0.22	+0.8
1,867,731	+		AO353_08495	0.22	-1.9
1,867,732	-		AO353_08495	0.22	-0.9
1,867,753	+		AO353_08495	0.24	-0.8
1,867,753	+		AO353_08495	0.24	+0.5
1,867,753	+		AO353_08495	0.24	+0.4
1,867,753	+		AO353_08495	0.24	-2.4
1,867,753	+		AO353_08495	0.24	+0.5
1,867,754	-		AO353_08495	0.24	+1.8
1,867,754	-		AO353_08495	0.24	-0.8
1,867,826	-		AO353_08495	0.32	-2.1
1,867,843	+		AO353_08495	0.33	+0.2
1,867,843	+		AO353_08495	0.33	+0.2
1,867,843	+		AO353_08495	0.33	+0.3
1,867,843	+		AO353_08495	0.33	+3.4
1,867,843	+		AO353_08495	0.33	-0.2
1,867,843	+		AO353_08495	0.33	-0.9
1,867,843	+		AO353_08495	0.33	+0.1
1,867,843	+		AO353_08495	0.33	-1.1
1,867,843	+		AO353_08495	0.33	-0.5
1,867,843	+		AO353_08495	0.33	+0.5
1,867,843	+		AO353_08495	0.33	-0.8
1,867,844	-		AO353_08495	0.33	+0.2
1,867,867	+		AO353_08495	0.36	+2.2
1,867,867	+		AO353_08495	0.36	+0.0
1,867,868	-		AO353_08495	0.36	-0.2
1,867,868	-		AO353_08495	0.36	-0.5
1,867,868	-		AO353_08495	0.36	-0.7
1,867,868	-		AO353_08495	0.36	+1.2
1,867,925	-		AO353_08495	0.42	+2.2
1,868,047	+		AO353_08495	0.55	-0.1
1,868,048	-		AO353_08495	0.55	-1.2
1,868,065	+		AO353_08495	0.57	-0.7
1,868,065	+		AO353_08495	0.57	-1.8
1,868,065	+		AO353_08495	0.57	-1.3
1,868,065	+		AO353_08495	0.57	-0.2
1,868,065	+		AO353_08495	0.57	-0.5
1,868,065	+		AO353_08495	0.57	-0.4
1,868,065	+		AO353_08495	0.57	+0.2
1,868,065	+		AO353_08495	0.57	-1.9
1,868,065	+		AO353_08495	0.57	+1.8
1,868,065	+		AO353_08495	0.57	+0.3
1,868,065	+		AO353_08495	0.57	-1.4
1,868,065	+		AO353_08495	0.57	+0.1
1,868,065	+		AO353_08495	0.57	+1.4
1,868,065	+		AO353_08495	0.57	-2.0
1,868,065	+		AO353_08495	0.57	+0.2
1,868,065	+		AO353_08495	0.57	-0.0
1,868,065	+		AO353_08495	0.57	-0.5
1,868,065	+		AO353_08495	0.57	-0.5
1,868,065	+		AO353_08495	0.57	-0.2
1,868,065	+		AO353_08495	0.57	-0.2
1,868,065	+		AO353_08495	0.57	+0.2
1,868,065	+		AO353_08495	0.57	+1.0
1,868,065	+		AO353_08495	0.57	+0.8
1,868,065	+		AO353_08495	0.57	+0.1
1,868,065	+				+1.8
1,868,065	+		AO353_08495	0.57	+0.2
1,868,065	+		AO353_08495	0.57	+0.9
1,868,065	+		AO353_08495	0.57	+1.3
1,868,065	+		AO353_08495	0.57	-1.7
1,868,065	+		AO353_08495	0.57	-0.2
1,868,065	+		AO353_08495	0.57	-0.5
1,868,065	+		AO353_08495	0.57	-1.2
1,868,065	+		AO353_08495	0.57	-0.5
1,868,065	+		AO353_08495	0.57	-1.0
1,868,065	+		AO353_08495	0.57	+0.3
1,868,065	+		AO353_08495	0.57	-1.0
1,868,066	-		AO353_08495	0.57	-1.0
1,868,066	-		AO353_08495	0.57	-0.8
1,868,066	-		AO353_08495	0.57	-0.4
1,868,066	-		AO353_08495	0.57	+0.2
1,868,066	-				+1.8
1,868,066	-		AO353_08495	0.57	-1.5
1,868,066	-		AO353_08495	0.57	-0.8
1,868,066	-		AO353_08495	0.57	-0.5
1,868,066	-		AO353_08495	0.57	+0.4
1,868,066	-		AO353_08495	0.57	+1.2
1,868,066	-		AO353_08495	0.57	-0.2
1,868,066	-		AO353_08495	0.57	+0.6
1,868,066	-		AO353_08495	0.57	+1.4
1,868,066	-		AO353_08495	0.57	-2.2
1,868,066	-		AO353_08495	0.57	-0.7
1,868,066	-		AO353_08495	0.57	+1.8
1,868,066	-		AO353_08495	0.57	-0.6
1,868,066	-		AO353_08495	0.57	-1.0
1,868,066	-		AO353_08495	0.57	+1.6
1,868,066	-		AO353_08495	0.57	-1.0
1,868,066	-		AO353_08495	0.57	-0.2
1,868,066	-		AO353_08495	0.57	-0.8
1,868,066	-		AO353_08495	0.57	-0.0
1,868,066	-		AO353_08495	0.57	-1.7
1,868,066	-		AO353_08495	0.57	-0.2
1,868,069	+		AO353_08495	0.57	-0.4
1,868,069	+		AO353_08495	0.57	-1.4
1,868,069	+		AO353_08495	0.57	-0.2
1,868,069	+		AO353_08495	0.57	+0.8
1,868,069	+		AO353_08495	0.57	+0.5
1,868,069	+		AO353_08495	0.57	-0.5
1,868,070	-		AO353_08495	0.57	+0.2
1,868,070	-		AO353_08495	0.57	-1.4
1,868,070	-		AO353_08495	0.57	+1.8
1,868,070	-		AO353_08495	0.57	-1.4
1,868,070	-		AO353_08495	0.57	-0.6
1,868,070	-		AO353_08495	0.57	-0.8
1,868,174	+		AO353_08495	0.68	-0.5
1,868,175	-		AO353_08495	0.68	-0.5
1,868,175	-		AO353_08495	0.68	-1.5
1,868,175	-		AO353_08495	0.68	+1.8