Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08185

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
1,802,353	+		AO353_08180	0.18	-1.2
1,802,366	-		AO353_08180	0.19	+0.8
1,802,366	-		AO353_08180	0.19	-1.0
1,802,366	-		AO353_08180	0.19	-0.8
1,802,634	+		AO353_08180	0.43	-1.4
1,802,634	+		AO353_08180	0.43	+0.5
1,802,634	+		AO353_08180	0.43	+1.8
1,802,635	-		AO353_08180	0.43	-1.4
1,802,647	+		AO353_08180	0.44	-0.1
1,802,647	+		AO353_08180	0.44	-2.1
1,802,647	+		AO353_08180	0.44	-2.7
1,802,647	+		AO353_08180	0.44	-1.1
1,802,647	+		AO353_08180	0.44	+2.4
1,802,647	+		AO353_08180	0.44	+1.1
1,802,647	+		AO353_08180	0.44	-0.8
1,802,647	+		AO353_08180	0.44	+0.2
1,802,647	+		AO353_08180	0.44	-0.8
1,802,647	+		AO353_08180	0.44	-1.5
1,802,648	-		AO353_08180	0.44	-1.8
1,802,648	-		AO353_08180	0.44	-2.4
1,802,648	-		AO353_08180	0.44	-0.2
1,802,648	-		AO353_08180	0.44	+1.5
1,802,648	-		AO353_08180	0.44	-2.4
1,802,648	-		AO353_08180	0.44	-0.5
1,802,648	-		AO353_08180	0.44	-2.3
1,802,648	-		AO353_08180	0.44	-2.2
1,802,648	-		AO353_08180	0.44	+0.5
1,802,648	-		AO353_08180	0.44	-0.2
1,802,651	+		AO353_08180	0.44	-0.5
1,802,651	+		AO353_08180	0.44	-1.4
1,802,651	+		AO353_08180	0.44	-1.1
1,802,651	+		AO353_08180	0.44	+1.2
1,802,651	+		AO353_08180	0.44	+0.8
1,802,652	-		AO353_08180	0.45	+0.8
1,802,652	-		AO353_08180	0.45	-0.5
1,802,652	-		AO353_08180	0.45	-1.2
1,802,652	-		AO353_08180	0.45	+0.2
1,802,652	-		AO353_08180	0.45	-2.9
1,802,652	-		AO353_08180	0.45	-0.2
1,802,663	-		AO353_08180	0.46	-1.0
1,802,843	+		AO353_08180	0.61	+0.8
1,802,843	+		AO353_08180	0.61	-1.7
1,802,843	+		AO353_08180	0.61	-1.4
1,802,843	+		AO353_08180	0.61	-1.1
1,802,843	+		AO353_08180	0.61	-1.5
1,802,843	+		AO353_08180	0.61	+1.4
1,802,843	+		AO353_08180	0.61	-0.9
1,802,843	+		AO353_08180	0.61	-1.9
1,802,844	-		AO353_08180	0.61	-1.0
1,802,844	-		AO353_08180	0.61	-1.4
1,802,844	-		AO353_08180	0.61	-0.2
1,802,844	-		AO353_08180	0.61	-1.0
1,802,844	-		AO353_08180	0.61	-1.2
1,802,844	-		AO353_08180	0.61	-0.5
1,802,844	-		AO353_08180	0.61	-0.8
1,802,906	+		AO353_08180	0.67	+0.2
1,802,906	+		AO353_08180	0.67	-1.4
1,802,906	+		AO353_08180	0.67	-0.2
1,802,906	+		AO353_08180	0.67	+0.8
1,802,906	+		AO353_08180	0.67	+1.8
1,802,906	+		AO353_08180	0.67	+0.8
1,802,907	-		AO353_08180	0.67	-1.5
1,802,907	-		AO353_08180	0.67	+0.2
1,802,907	-		AO353_08180	0.67	-1.4
1,802,907	-		AO353_08180	0.67	-1.5
1,802,907	-		AO353_08180	0.67	-1.0
1,802,907	-		AO353_08180	0.67	+0.5
1,802,907	-		AO353_08180	0.67	+1.8
1,802,942	+		AO353_08180	0.70	-1.3
1,802,942	+		AO353_08180	0.70	-1.7
1,802,943	-		AO353_08180	0.70	+0.8
1,802,943	-		AO353_08180	0.70	-0.2
1,802,943	-		AO353_08180	0.70	-0.8
1,802,943	-		AO353_08180	0.70	+0.7
1,802,993	+		AO353_08180	0.74	-0.2
1,802,993	+		AO353_08180	0.74	-1.2
1,802,993	+		AO353_08180	0.74	-0.3
1,802,993	+		AO353_08180	0.74	-2.3
1,802,994	-		AO353_08180	0.75	+1.4
1,802,994	-		AO353_08180	0.75	+0.8
1,802,994	-		AO353_08180	0.75	-1.7
1,802,994	-		AO353_08180	0.75	+1.2
1,802,994	-		AO353_08180	0.75	-2.4
1,802,994	-		AO353_08180	0.75	+0.2
1,803,020	+		AO353_08180	0.77	-1.0
1,803,020	+		AO353_08180	0.77	+0.8
1,803,021	-		AO353_08180	0.77	-1.0
1,803,021	-		AO353_08180	0.77	-0.7
1,803,021	-		AO353_08180	0.77	+0.2
1,803,021	-		AO353_08180	0.77	+1.8
1,803,021	-		AO353_08180	0.77	+1.8
1,803,182	+				+0.2
1,803,182	+				-1.3
1,803,183	-				-1.0
1,803,239	+				-1.2
1,803,239	+				-1.6
1,803,260	+				-0.5
1,803,260	+				-0.2
1,803,260	+				-1.0
1,803,260	+				-1.9
1,803,260	+				+1.8
1,803,261	-				-0.2
1,803,261	-				-1.2
1,803,261	-				-1.4
1,803,261	-				-1.2
1,803,261	-				-2.6
1,803,651	+		AO353_08185	0.58	-0.5
1,803,651	+		AO353_08185	0.58	+0.8
1,803,651	+		AO353_08185	0.58	-0.5
1,803,651	+		AO353_08185	0.58	+0.4
1,803,652	-		AO353_08185	0.58	-1.7
1,803,652	-		AO353_08185	0.58	-2.3
1,803,652	-		AO353_08185	0.58	-1.2
1,803,652	-		AO353_08185	0.58	-1.3
1,803,696	+		AO353_08185	0.65	-0.2
1,803,696	+		AO353_08185	0.65	-1.6
1,803,697	-		AO353_08185	0.65	+1.8
1,803,697	-		AO353_08185	0.65	-0.2
1,803,705	+		AO353_08185	0.67	-0.2
1,803,705	+		AO353_08185	0.67	-1.5
1,803,705	+		AO353_08185	0.67	-0.2
1,803,705	+		AO353_08185	0.67	-0.1
1,803,706	-		AO353_08185	0.67	-1.5
1,803,706	-		AO353_08185	0.67	+0.2
1,803,827	+		AO353_08185	0.86	-3.7
1,803,832	+		AO353_08185	0.87	-1.5
1,803,832	+		AO353_08185	0.87	-1.5
1,803,832	+		AO353_08185	0.87	+1.8
1,803,832	+		AO353_08185	0.87	-1.7
1,803,832	+		AO353_08185	0.87	-1.2
1,803,833	-		AO353_08185	0.87	-1.2
1,803,833	-		AO353_08185	0.87	-2.1
1,803,833	-		AO353_08185	0.87	-1.8
1,803,833	-		AO353_08185	0.87	-1.2
1,803,833	-		AO353_08185	0.87	-1.2
1,803,833	-		AO353_08185	0.87	-0.8
1,803,839	+		AO353_08185	0.88	-1.5
1,803,839	+		AO353_08185	0.88	-1.7
1,803,839	+		AO353_08185	0.88	+0.2
1,803,840	-		AO353_08185	0.88	-2.2
1,803,840	-		AO353_08185	0.88	-0.9
1,803,844	+		AO353_08185	0.89	-0.4
1,803,844	+		AO353_08185	0.89	-2.9
1,803,844	+		AO353_08185	0.89	-1.0
1,803,844	+		AO353_08185	0.89	-0.8
1,803,844	+		AO353_08185	0.89	-3.1
1,803,844	+		AO353_08185	0.89	-0.9
1,803,844	+		AO353_08185	0.89	+0.2
1,803,845	-		AO353_08185	0.89	-1.2
1,803,845	-		AO353_08185	0.89	-0.5
1,803,845	-		AO353_08185	0.89	-2.9
1,803,845	-		AO353_08185	0.89	+1.8
1,803,845	-		AO353_08185	0.89	+0.8
1,803,847	+		AO353_08185	0.90	-2.0
1,803,847	+		AO353_08185	0.90	-1.2
1,803,847	+		AO353_08185	0.90	+0.2
1,803,848	-		AO353_08185	0.90	-1.4
1,803,848	-		AO353_08185	0.90	-0.8
1,803,848	-		AO353_08185	0.90	+0.8
1,803,848	-		AO353_08185	0.90	+0.8
1,803,848	-		AO353_08185	0.90	-3.0
1,803,848	-		AO353_08185	0.90	-0.9
1,803,848	-		AO353_08185	0.90	-2.1
1,803,848	-		AO353_08185	0.90	+0.4
1,803,864	+				+2.4
1,803,864	+				-0.9
1,803,864	+				-1.4
1,803,864	+				-0.5
1,803,864	+				-2.0
1,803,865	-				-0.8
1,803,865	-				-0.5
1,803,865	-				-1.0
1,803,902	-				-0.9
1,803,910	-				-0.2
1,803,946	+				+0.8
1,803,958	+				-0.4
1,803,958	+				+0.5
1,803,958	+				-1.0
1,803,958	+				-0.5
1,803,958	+				-1.5
1,803,959	-				+0.6
1,803,959	-				+2.1
1,803,959	-				-0.4
1,803,961	+				-0.3
1,803,961	+				+2.8
1,803,961	+				-0.9
1,804,047	+		AO353_08190	0.26	-1.1
1,804,047	+		AO353_08190	0.26	+1.8
1,804,047	+		AO353_08190	0.26	+1.8
1,804,047	+		AO353_08190	0.26	-0.1
1,804,047	+		AO353_08190	0.26	-1.4
1,804,048	-		AO353_08190	0.26	+0.8
1,804,048	-		AO353_08190	0.26	+0.8
1,804,048	-		AO353_08190	0.26	-1.2
1,804,048	-		AO353_08190	0.26	-0.0
1,804,048	-		AO353_08190	0.26	-0.9
1,804,048	-		AO353_08190	0.26	-0.3
1,804,048	-		AO353_08190	0.26	-0.4
1,804,048	-		AO353_08190	0.26	-0.2
1,804,048	-		AO353_08190	0.26	-0.0
1,804,068	+		AO353_08190	0.30	+0.6
1,804,068	+		AO353_08190	0.30	+0.8
1,804,068	+		AO353_08190	0.30	-0.8
1,804,069	-		AO353_08190	0.31	+0.2
1,804,069	-		AO353_08190	0.31	-0.1
1,804,069	-		AO353_08190	0.31	+0.5
1,804,069	-		AO353_08190	0.31	-0.6
1,804,069	-		AO353_08190	0.31	-1.5
1,804,069	-		AO353_08190	0.31	+0.2
1,804,202	+		AO353_08190	0.61	-0.5
1,804,202	+		AO353_08190	0.61	-0.2
1,804,203	-		AO353_08190	0.61	+0.8
1,804,251	+		AO353_08190	0.72	-0.3
1,804,251	+		AO353_08190	0.72	-1.0
1,804,251	+		AO353_08190	0.72	+0.8
1,804,252	-		AO353_08190	0.73	+1.8
1,804,252	-		AO353_08190	0.73	+0.4
1,804,252	-		AO353_08190	0.73	-0.5
1,804,254	+		AO353_08190	0.73	-0.2
1,804,254	+		AO353_08190	0.73	-1.0
1,804,254	+		AO353_08190	0.73	+0.2
1,804,254	+		AO353_08190	0.73	+0.5
1,804,254	+		AO353_08190	0.73	+2.0
1,804,254	+		AO353_08190	0.73	-0.1
1,804,254	+		AO353_08190	0.73	-0.2
1,804,254	+		AO353_08190	0.73	-1.5
1,804,254	+		AO353_08190	0.73	-0.7
1,804,254	+		AO353_08190	0.73	+0.4
1,804,254	+		AO353_08190	0.73	-1.2
1,804,254	+		AO353_08190	0.73	+0.8
1,804,254	+		AO353_08190	0.73	-2.0
1,804,255	-		AO353_08190	0.73	+1.4
1,804,255	-		AO353_08190	0.73	+2.1
1,804,255	-		AO353_08190	0.73	+1.8
1,804,255	-		AO353_08190	0.73	-0.2
1,804,255	-		AO353_08190	0.73	+0.5
1,804,255	-		AO353_08190	0.73	-1.5
1,804,255	-		AO353_08190	0.73	+1.2
1,804,255	-		AO353_08190	0.73	-0.2
1,804,255	-		AO353_08190	0.73	-1.7
1,804,255	-		AO353_08190	0.73	+0.8
1,804,622	+		AO353_08195	0.43	-1.0
1,804,622	+		AO353_08195	0.43	+2.8
1,804,622	+		AO353_08195	0.43	-1.7
1,804,623	-		AO353_08195	0.43	+0.2
1,804,623	-		AO353_08195	0.43	-1.8
1,804,623	-		AO353_08195	0.43	+2.8
1,804,623	-		AO353_08195	0.43	-0.8
1,804,623	-		AO353_08195	0.43	-0.2
1,804,623	-		AO353_08195	0.43	-1.8
1,804,635	-		AO353_08195	0.45	-1.6
1,804,743	+		AO353_08195	0.63	-0.8
1,804,744	-		AO353_08195	0.63	-0.5
1,804,836	-		AO353_08195	0.79	+1.8
1,804,836	-		AO353_08195	0.79	-1.0
1,804,836	-		AO353_08195	0.79	-0.5