Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05205

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
1,142,364	+		AO353_05195	0.51	-0.2
1,142,364	+		AO353_05195	0.51	-2.2
1,142,364	+		AO353_05195	0.51	-0.6
1,142,365	-		AO353_05195	0.51	+0.5
1,142,365	-		AO353_05195	0.51	-1.6
1,142,379	-		AO353_05195	0.53	-0.9
1,142,488	+		AO353_05195	0.66	-0.7
1,142,488	+		AO353_05195	0.66	+1.8
1,142,488	+		AO353_05195	0.66	+0.7
1,142,488	+		AO353_05195	0.66	-1.2
1,142,488	+		AO353_05195	0.66	+1.1
1,142,488	+		AO353_05195	0.66	-1.1
1,142,488	+		AO353_05195	0.66	-0.7
1,142,489	-		AO353_05195	0.66	-0.7
1,142,489	-		AO353_05195	0.66	-2.0
1,142,489	-		AO353_05195	0.66	-3.0
1,142,489	-		AO353_05195	0.66	-0.5
1,142,489	-		AO353_05195	0.66	-1.3
1,142,489	-		AO353_05195	0.66	-1.6
1,142,489	-		AO353_05195	0.66	-1.7
1,142,489	-		AO353_05195	0.66	-0.7
1,142,489	-		AO353_05195	0.66	-0.5
1,142,489	-		AO353_05195	0.66	-1.3
1,142,489	-		AO353_05195	0.66	+0.7
1,142,489	-		AO353_05195	0.66	-0.1
1,142,562	+		AO353_05195	0.74	+0.5
1,142,613	+		AO353_05195	0.80	+0.1
1,142,613	+		AO353_05195	0.80	-1.0
1,142,613	+		AO353_05195	0.80	+0.3
1,142,614	-		AO353_05195	0.80	+0.7
1,142,614	-		AO353_05195	0.80	+0.4
1,142,614	-		AO353_05195	0.80	-0.4
1,142,614	-		AO353_05195	0.80	-0.3
1,142,614	-		AO353_05195	0.80	-0.6
1,142,614	-		AO353_05195	0.80	-0.6
1,142,658	+		AO353_05195	0.85	-1.3
1,142,658	+		AO353_05195	0.85	-1.4
1,142,658	+		AO353_05195	0.85	-2.5
1,142,658	+		AO353_05195	0.85	-1.2
1,142,659	-		AO353_05195	0.85	+0.6
1,142,659	-		AO353_05195	0.85	-1.3
1,142,659	-		AO353_05195	0.85	-2.9
1,142,659	-		AO353_05195	0.85	-0.8
1,142,659	-		AO353_05195	0.85	-0.3
1,142,706	+				+1.8
1,142,707	-				+0.0
1,142,777	+				-0.2
1,142,777	+				+2.4
1,142,777	+				-0.2
1,142,777	+				+1.8
1,142,778	-				-0.1
1,142,778	-				-0.8
1,142,778	-				+0.3
1,142,778	-				+0.2
1,142,778	-				+0.2
1,142,778	-				+0.8
1,142,778	-				-0.1
1,142,781	+				-0.2
1,142,781	+				-0.2
1,142,781	+				+1.3
1,142,782	-				+1.6
1,142,782	-				-0.5
1,143,051	+				+0.0
1,143,051	+				+1.4
1,143,051	+				+1.4
1,143,051	+				-0.5
1,143,051	+				-0.1
1,143,051	+				+0.6
1,143,051	+				-0.2
1,143,052	-				-1.2
1,143,052	-				-0.6
1,143,052	-				+1.4
1,143,052	-				+1.3
1,143,052	-				+1.1
1,143,052	-				-0.7
1,143,052	-				-0.5
1,143,052	-				+0.2
1,143,052	-				+0.4
1,143,069	+				-0.6
1,143,069	+				-2.7
1,143,086	-				+0.8
1,143,086	-				+0.4
1,143,086	-				-1.3
1,143,086	-				-1.2
1,143,086	-				-2.1
1,143,086	-				-0.5
1,143,086	-				-0.5
1,143,086	-				-1.0
1,143,086	-				+0.3
1,143,086	-				+0.3
1,143,086	-				-0.2
1,143,157	-				-0.9
1,143,157	-				+0.8
1,143,276	+				-0.5
1,143,291	+				-1.2
1,143,292	-				+1.8
1,143,391	+				-1.0
1,143,391	+				+1.3
1,143,391	+				-1.0
1,143,391	+				+1.8
1,143,391	+				-2.0
1,143,391	+				+1.8
1,143,391	+				-0.2
1,143,392	-				-0.2
1,143,392	-				-1.9
1,143,392	-				-1.2
1,143,412	+				-0.8
1,143,412	+				+0.3
1,143,412	+				-1.2
1,143,412	+				+0.8
1,143,412	+				-0.2
1,143,480	+		AO353_05205	0.14	+0.3
1,143,480	+		AO353_05205	0.14	-0.2
1,143,480	+		AO353_05205	0.14	-2.4
1,143,480	+		AO353_05205	0.14	+0.3
1,143,648	+		AO353_05205	0.27	-1.6
1,143,648	+		AO353_05205	0.27	-0.5
1,143,648	+		AO353_05205	0.27	-1.2
1,143,648	+		AO353_05205	0.27	-0.7
1,143,649	-		AO353_05205	0.27	-1.0
1,143,649	-		AO353_05205	0.27	-0.2
1,143,649	-		AO353_05205	0.27	-1.0
1,143,652	+		AO353_05205	0.27	-1.0
1,143,653	-		AO353_05205	0.27	-1.1
1,143,663	+		AO353_05205	0.28	+0.3
1,143,663	+		AO353_05205	0.28	-0.6
1,143,663	+		AO353_05205	0.28	-0.7
1,143,663	+		AO353_05205	0.28	-2.3
1,143,663	+		AO353_05205	0.28	-0.5
1,143,663	+		AO353_05205	0.28	-0.2
1,143,663	+		AO353_05205	0.28	+0.3
1,143,663	+		AO353_05205	0.28	-0.2
1,143,663	+		AO353_05205	0.28	+0.8
1,143,663	+		AO353_05205	0.28	+0.8
1,143,663	+		AO353_05205	0.28	-0.5
1,143,663	+		AO353_05205	0.28	-2.0
1,143,663	+		AO353_05205	0.28	-0.7
1,143,663	+		AO353_05205	0.28	+0.3
1,143,663	+		AO353_05205	0.28	-1.6
1,143,663	+		AO353_05205	0.28	-1.5
1,143,663	+		AO353_05205	0.28	-1.2
1,143,663	+		AO353_05205	0.28	-2.1
1,143,663	+		AO353_05205	0.28	-0.5
1,143,663	+		AO353_05205	0.28	-1.9
1,143,663	+		AO353_05205	0.28	-2.2
1,143,663	+		AO353_05205	0.28	+0.3
1,143,663	+		AO353_05205	0.28	-1.1
1,143,663	+		AO353_05205	0.28	-0.2
1,143,663	+		AO353_05205	0.28	+0.8
1,143,664	-		AO353_05205	0.28	+0.3
1,143,664	-		AO353_05205	0.28	+1.8
1,143,664	-		AO353_05205	0.28	-0.7
1,143,664	-		AO353_05205	0.28	-0.6
1,143,664	-		AO353_05205	0.28	-1.0
1,143,664	-		AO353_05205	0.28	-2.3
1,143,664	-		AO353_05205	0.28	-1.6
1,143,664	-		AO353_05205	0.28	-0.3
1,143,664	-		AO353_05205	0.28	+0.8
1,143,664	-		AO353_05205	0.28	-1.0
1,143,664	-		AO353_05205	0.28	+1.4
1,143,664	-		AO353_05205	0.28	-0.9
1,143,664	-		AO353_05205	0.28	+1.8
1,143,664	-		AO353_05205	0.28	-1.0
1,143,664	-		AO353_05205	0.28	-1.3
1,143,664	-		AO353_05205	0.28	+1.8
1,143,664	-		AO353_05205	0.28	-0.7
1,143,664	-		AO353_05205	0.28	-2.1
1,143,664	-		AO353_05205	0.28	+0.3
1,143,664	-		AO353_05205	0.28	-1.3
1,143,664	-		AO353_05205	0.28	-2.1
1,143,664	-		AO353_05205	0.28	-1.2
1,143,664	-		AO353_05205	0.28	-0.2
1,143,702	+		AO353_05205	0.31	-3.0
1,143,702	+		AO353_05205	0.31	-2.5
1,143,702	+		AO353_05205	0.31	-1.3
1,143,703	-		AO353_05205	0.31	-0.2
1,143,703	-		AO353_05205	0.31	-2.2
1,143,703	-		AO353_05205	0.31	-3.4
1,143,703	-		AO353_05205	0.31	-2.3
1,144,023	+		AO353_05205	0.54	+2.8
1,144,023	+		AO353_05205	0.54	-1.3
1,144,023	+		AO353_05205	0.54	+1.8
1,144,024	-		AO353_05205	0.54	-1.5
1,144,024	-		AO353_05205	0.54	-1.0
1,144,029	+		AO353_05205	0.55	-1.5
1,144,030	-		AO353_05205	0.55	-0.5
1,144,030	-		AO353_05205	0.55	-0.5
1,144,128	+		AO353_05205	0.62	+0.3
1,144,128	+		AO353_05205	0.62	-1.5
1,144,129	-		AO353_05205	0.62	-0.7
1,144,129	-		AO353_05205	0.62	-1.0
1,144,129	-		AO353_05205	0.62	+1.3
1,144,431	+		AO353_05205	0.85	-0.5
1,144,431	+		AO353_05205	0.85	-1.0
1,144,431	+				+1.8
1,144,431	+		AO353_05205	0.85	-1.2
1,144,431	+		AO353_05205	0.85	-1.3
1,144,431	+		AO353_05205	0.85	-0.7
1,144,431	+		AO353_05205	0.85	-2.0
1,144,431	+		AO353_05205	0.85	-2.2
1,144,431	+		AO353_05205	0.85	-0.5
1,144,431	+		AO353_05205	0.85	+0.3
1,144,431	+		AO353_05205	0.85	-2.3
1,144,431	+		AO353_05205	0.85	+0.1
1,144,431	+		AO353_05205	0.85	+0.3
1,144,431	+		AO353_05205	0.85	+1.1
1,144,431	+		AO353_05205	0.85	-2.4
1,144,431	+		AO353_05205	0.85	-0.7
1,144,431	+		AO353_05205	0.85	+0.5
1,144,431	+		AO353_05205	0.85	+0.4
1,144,431	+		AO353_05205	0.85	-1.2
1,144,431	+		AO353_05205	0.85	-0.7
1,144,432	-		AO353_05205	0.85	+0.5
1,144,432	-		AO353_05205	0.85	-0.4
1,144,432	-		AO353_05205	0.85	-0.2
1,144,432	-		AO353_05205	0.85	+0.4
1,144,432	-		AO353_05205	0.85	-1.9
1,144,432	-		AO353_05205	0.85	+0.8
1,144,432	-		AO353_05205	0.85	-2.5
1,144,432	-		AO353_05205	0.85	-1.6
1,144,432	-		AO353_05205	0.85	+1.1
1,144,432	-		AO353_05205	0.85	+0.6
1,144,432	-		AO353_05205	0.85	+0.8
1,144,432	-		AO353_05205	0.85	-0.5
1,144,432	-		AO353_05205	0.85	-1.7
1,144,432	-		AO353_05205	0.85	-2.2
1,144,432	-		AO353_05205	0.85	-2.9
1,144,432	-		AO353_05205	0.85	-0.7
1,144,432	-		AO353_05205	0.85	-1.0
1,144,432	-		AO353_05205	0.85	-1.9
1,144,432	-		AO353_05205	0.85	+0.8
1,144,432	-		AO353_05205	0.85	+0.3
1,144,438	+		AO353_05205	0.85	-1.7
1,144,438	+		AO353_05205	0.85	+0.3
1,144,438	+		AO353_05205	0.85	-1.1
1,144,438	+		AO353_05205	0.85	+0.8
1,144,439	-		AO353_05205	0.85	-1.2
1,144,439	-		AO353_05205	0.85	+0.5
1,144,439	-		AO353_05205	0.85	-1.2
1,144,439	-		AO353_05205	0.85	+1.1
1,144,758	-				-1.3
1,144,843	+		AO353_05210	0.19	+0.8
1,144,843	+		AO353_05210	0.19	-0.5
1,144,843	+		AO353_05210	0.19	+0.8
1,144,843	+		AO353_05210	0.19	-0.7
1,144,843	+		AO353_05210	0.19	+1.2
1,144,843	+		AO353_05210	0.19	-1.0
1,144,844	-		AO353_05210	0.19	+1.8
1,144,844	-		AO353_05210	0.19	-1.0
1,144,844	-		AO353_05210	0.19	+1.1
1,144,844	-		AO353_05210	0.19	+1.5
1,144,844	-		AO353_05210	0.19	-2.7
1,144,844	-		AO353_05210	0.19	+0.8
1,144,844	-		AO353_05210	0.19	+1.8
1,144,844	-		AO353_05210	0.19	-0.5
1,144,844	-		AO353_05210	0.19	-0.9
1,144,844	-		AO353_05210	0.19	+1.8
1,144,844	-		AO353_05210	0.19	-0.5
1,144,933	+		AO353_05210	0.36	-0.5
1,144,943	-		AO353_05210	0.38	+1.1
1,144,943	-		AO353_05210	0.38	+0.3
1,145,040	-		AO353_05210	0.56	-0.5
1,145,040	-		AO353_05210	0.56	+1.3
1,145,228	+				+0.3
1,145,228	+				+0.3
1,145,228	+				+2.2
1,145,228	+				-1.9
1,145,228	+				+0.3
1,145,228	+				-0.5
1,145,228	+				-0.6
1,145,228	+				-0.7
1,145,229	-				-1.5
1,145,229	-				+1.8
1,145,229	-				+1.8
1,145,229	-				-1.7
1,145,229	-				-0.5
1,145,229	-				+1.3
1,145,267	+				-0.2
1,145,268	-				+1.0
1,145,415	-				-0.5
1,145,512	+		AO353_05215	0.13	-3.2
1,145,513	-		AO353_05215	0.14	-2.6
1,145,535	+		AO353_05215	0.15	-1.0
1,145,607	+		AO353_05215	0.20	-0.7
1,145,607	+		AO353_05215	0.20	-1.1
1,145,607	+		AO353_05215	0.20	+0.8
1,145,607	+		AO353_05215	0.20	-0.7
1,145,607	+		AO353_05215	0.20	+2.8
1,145,607	+		AO353_05215	0.20	-1.0
1,145,608	-		AO353_05215	0.20	-2.2
1,145,608	-		AO353_05215	0.20	+1.3
1,145,608	-		AO353_05215	0.20	-1.1