Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04870

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
1,074,677	+				-1.5
1,074,677	+				-2.2
1,074,677	+				+1.8
1,074,677	+				+0.8
1,074,678	-				+0.6
1,074,678	-				-1.0
1,074,678	-				-0.2
1,074,678	-				-2.2
1,074,678	-				-1.0
1,074,678	-				-1.2
1,074,678	-				+0.8
1,074,775	+		AO353_04865	0.19	+0.5
1,074,776	-		AO353_04865	0.19	-1.3
1,074,776	-		AO353_04865	0.19	-0.5
1,074,776	-		AO353_04865	0.19	+0.2
1,074,776	-		AO353_04865	0.19	-0.3
1,074,776	-		AO353_04865	0.19	-1.6
1,074,856	+		AO353_04865	0.28	-1.2
1,074,856	+		AO353_04865	0.28	-1.5
1,074,856	+		AO353_04865	0.28	-0.8
1,074,856	+		AO353_04865	0.28	-2.3
1,074,857	-		AO353_04865	0.28	-1.9
1,074,857	-		AO353_04865	0.28	-0.5
1,074,857	-		AO353_04865	0.28	-1.8
1,074,875	-		AO353_04865	0.30	-0.5
1,074,875	-		AO353_04865	0.30	-1.0
1,074,881	+		AO353_04865	0.30	+0.2
1,074,882	-		AO353_04865	0.31	-1.6
1,074,882	-		AO353_04865	0.31	+0.8
1,074,882	-		AO353_04865	0.31	-2.8
1,074,905	+		AO353_04865	0.33	-1.6
1,074,905	+		AO353_04865	0.33	-1.8
1,074,905	+		AO353_04865	0.33	-1.7
1,074,906	-		AO353_04865	0.33	+0.2
1,074,906	-		AO353_04865	0.33	-1.0
1,074,922	+		AO353_04865	0.35	-1.0
1,074,922	+		AO353_04865	0.35	-0.2
1,074,922	+		AO353_04865	0.35	-0.3
1,074,922	+		AO353_04865	0.35	-0.5
1,074,923	-		AO353_04865	0.35	+1.8
1,074,923	-		AO353_04865	0.35	-1.3
1,074,923	-		AO353_04865	0.35	-2.2
1,074,923	-		AO353_04865	0.35	-0.9
1,074,923	-		AO353_04865	0.35	+2.6
1,074,923	-		AO353_04865	0.35	-0.5
1,074,923	-		AO353_04865	0.35	-0.2
1,074,946	+		AO353_04865	0.38	+0.8
1,074,947	-		AO353_04865	0.38	-1.2
1,074,947	-		AO353_04865	0.38	-0.6
1,075,366	-		AO353_04865	0.84	-0.5
1,075,366	-		AO353_04865	0.84	-1.6
1,075,366	-		AO353_04865	0.84	-2.8
1,075,366	-		AO353_04865	0.84	-1.6
1,075,406	-		AO353_04865	0.89	+1.8
1,075,492	+				+0.2
1,075,492	+				-0.5
1,075,492	+				-1.2
1,075,492	+				+1.8
1,075,492	+				-0.5
1,075,492	+				-2.0
1,075,492	+				-1.2
1,075,493	-				+1.8
1,075,493	-				-0.8
1,075,493	-				-1.8
1,075,493	-				-2.0
1,075,493	-				-1.5
1,075,493	-				-1.5
1,075,493	-				-0.7
1,075,494	+				-2.0
1,075,494	+				+0.4
1,075,495	-				-0.1
1,075,495	-				-1.3
1,075,495	-				+0.5
1,075,567	+				-1.6
1,075,567	+				-0.8
1,075,567	+				+0.3
1,075,568	-				-1.2
1,075,568	-				+1.8
1,075,618	+				-0.2
1,075,618	+				+0.5
1,075,618	+				-0.2
1,075,619	-				-1.2
1,075,619	-				-2.4
1,075,780	+		AO353_04870	0.15	-2.2
1,075,780	+		AO353_04870	0.15	-0.8
1,075,780	+		AO353_04870	0.15	-0.8
1,075,780	+		AO353_04870	0.15	-1.2
1,075,780	+		AO353_04870	0.15	-0.5
1,075,781	-		AO353_04870	0.15	-0.0
1,075,781	-		AO353_04870	0.15	-2.0
1,075,813	+		AO353_04870	0.19	+1.8
1,075,813	+		AO353_04870	0.19	-1.0
1,075,813	+		AO353_04870	0.19	-1.2
1,075,813	+		AO353_04870	0.19	+0.8
1,075,814	-		AO353_04870	0.19	+0.1
1,075,814	-		AO353_04870	0.19	-0.5
1,075,948	+		AO353_04870	0.34	-1.2
1,075,948	+		AO353_04870	0.34	-0.8
1,075,948	+		AO353_04870	0.34	-1.0
1,075,949	-		AO353_04870	0.34	-0.5
1,075,949	-		AO353_04870	0.34	+0.2
1,076,230	+		AO353_04870	0.66	-0.9
1,076,230	+		AO353_04870	0.66	-1.3
1,076,231	-		AO353_04870	0.67	-0.3
1,076,299	+		AO353_04870	0.74	+0.2
1,076,300	-		AO353_04870	0.74	-1.6
1,076,300	-		AO353_04870	0.74	-1.8
1,076,350	+		AO353_04870	0.80	-0.9
1,076,350	+		AO353_04870	0.80	+2.8
1,076,350	+		AO353_04870	0.80	-1.2
1,076,350	+		AO353_04870	0.80	+1.8
1,076,351	-		AO353_04870	0.80	-1.5
1,076,351	-		AO353_04870	0.80	-2.2
1,076,351	-		AO353_04870	0.80	+0.0
1,076,351	-		AO353_04870	0.80	+0.2
1,076,351	-		AO353_04870	0.80	-0.8
1,076,522	-				+0.0
1,076,546	+				+1.8
1,076,651	+		AO353_04875	0.10	+1.2
1,076,651	+		AO353_04875	0.10	-0.5
1,076,651	+		AO353_04875	0.10	-1.0
1,076,651	+		AO353_04875	0.10	+0.2
1,076,651	+		AO353_04875	0.10	+2.2
1,076,652	-		AO353_04875	0.10	-0.2
1,076,652	-		AO353_04875	0.10	-1.0
1,076,652	-		AO353_04875	0.10	+0.2
1,076,652	-		AO353_04875	0.10	+0.8
1,076,661	+		AO353_04875	0.11	-0.8
1,076,662	-		AO353_04875	0.11	+1.1
1,076,662	-		AO353_04875	0.11	-1.3
1,076,687	+		AO353_04875	0.13	+0.1
1,076,687	+		AO353_04875	0.13	+0.0
1,076,687	+		AO353_04875	0.13	+1.1
1,076,687	+		AO353_04875	0.13	+0.5
1,076,687	+		AO353_04875	0.13	+1.2
1,076,687	+		AO353_04875	0.13	-2.4
1,076,687	+		AO353_04875	0.13	+0.2
1,076,687	+		AO353_04875	0.13	+0.2
1,076,687	+		AO353_04875	0.13	+0.2
1,076,688	-		AO353_04875	0.14	-1.3
1,076,688	-		AO353_04875	0.14	-0.4
1,076,688	-		AO353_04875	0.14	-1.9
1,076,727	-		AO353_04875	0.17	+0.2
1,076,810	+		AO353_04875	0.25	-0.3
1,076,810	+		AO353_04875	0.25	-0.3
1,076,811	-		AO353_04875	0.25	+1.4
1,077,206	+		AO353_04875	0.63	+0.5
1,077,206	+		AO353_04875	0.63	-1.2
1,077,206	+		AO353_04875	0.63	+1.8
1,077,206	+		AO353_04875	0.63	-1.2
1,077,206	+		AO353_04875	0.63	-0.3
1,077,207	-				+1.8
1,077,207	-		AO353_04875	0.63	-1.8
1,077,207	-		AO353_04875	0.63	+0.8
1,077,207	-		AO353_04875	0.63	-0.5
1,077,207	-		AO353_04875	0.63	-0.2
1,077,207	-		AO353_04875	0.63	+3.4
1,077,207	-		AO353_04875	0.63	+0.0
1,077,207	-		AO353_04875	0.63	+0.8
1,077,437	+		AO353_04875	0.85	-0.3
1,077,437	+		AO353_04875	0.85	+0.8
1,077,438	-		AO353_04875	0.85	+0.8
1,077,438	-		AO353_04875	0.85	-0.2
1,077,515	+				+2.8
1,077,516	-				+0.1