Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04655

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
1,003,461	-		AO353_04645	0.80	-1.2
1,003,823	+				-0.6
1,003,824	-				+0.2
1,003,824	-				-1.2
1,003,831	+				-0.2
1,003,831	+				-1.3
1,003,831	+				-2.0
1,003,832	-				+0.5
1,003,832	-				-1.5
1,003,846	+				+0.4
1,003,846	+				-0.3
1,003,868	+				-0.5
1,003,869	-				-0.2
1,003,869	-				+1.1
1,003,886	+				-1.0
1,003,886	+				-1.3
1,003,886	+				-1.2
1,003,886	+				-0.6
1,003,886	+				+1.8
1,003,886	+				+1.4
1,003,886	+				-0.8
1,003,886	+				+0.8
1,003,887	-				+0.2
1,003,907	+				-0.5
1,003,908	-				-1.2
1,003,908	-				+0.8
1,003,908	-				+0.2
1,003,908	-				-1.4
1,003,908	-				-1.2
1,003,928	+				-1.8
1,003,928	+				+0.8
1,003,928	+				+0.2
1,003,929	-				-1.5
1,003,929	-				-0.8
1,003,929	-				-0.2
1,004,037	-		AO353_04650	0.24	+0.8
1,004,037	-		AO353_04650	0.24	-0.6
1,004,037	-		AO353_04650	0.24	-1.3
1,004,276	+		AO353_04650	0.77	+0.0
1,004,277	-		AO353_04650	0.77	-1.6
1,004,464	-		AO353_04655	0.33	+0.4
1,004,725	+		AO353_04660	0.22	-1.8
1,004,725	+		AO353_04660	0.22	+0.8
1,004,725	+		AO353_04660	0.22	-0.5
1,004,725	+		AO353_04660	0.22	-1.5
1,004,725	+		AO353_04660	0.22	-0.2
1,004,725	+		AO353_04660	0.22	-2.2
1,004,726	-		AO353_04660	0.22	-1.8
1,004,726	-		AO353_04660	0.22	-0.3
1,004,726	-		AO353_04660	0.22	-2.7
1,004,996	+		AO353_04660	0.79	-1.8
1,004,996	+		AO353_04660	0.79	-1.0
1,004,996	+		AO353_04660	0.79	+0.4
1,004,996	+		AO353_04660	0.79	-1.5
1,004,997	-		AO353_04660	0.79	+1.8
1,004,997	-		AO353_04660	0.79	+1.8
1,004,997	-		AO353_04660	0.79	-0.2
1,004,997	-		AO353_04660	0.79	-0.7
1,005,059	+				-1.9
1,005,059	+				+0.8
1,005,060	-				-0.2
1,005,060	-				-2.1
1,005,060	-				+1.0
1,005,101	+				+0.8
1,005,101	+				-1.9
1,005,102	-				+0.6
1,005,102	-				-0.5
1,005,126	+				+0.2
1,005,126	+				+0.4
1,005,180	+				+1.2
1,005,180	+				+0.2
1,005,181	-				-0.2
1,005,203	+				-0.2
1,005,203	+				-0.2
1,005,249	+				-1.6
1,005,249	+				-1.9
1,005,249	+				-0.2
1,005,249	+				+1.5
1,005,249	+				+2.8
1,005,250	-				-0.8
1,005,250	-				+0.2
1,005,250	-				+2.8
1,005,250	-				-2.0
1,005,250	-				+1.3
1,005,250	-				-2.3
1,005,250	-				-1.2
1,005,268	-				-1.2
1,005,348	+				-2.0
1,005,348	+				+1.2
1,005,349	-				+0.8
1,005,349	-				-0.5
1,005,349	-				+0.2
1,005,349	-				-1.0
1,005,379	-				+0.2
1,005,379	-				+0.5
1,005,528	+		AO353_04665	0.20	-0.8
1,005,528	+		AO353_04665	0.20	+0.2
1,005,528	+		AO353_04665	0.20	-1.0
1,005,528	+		AO353_04665	0.20	+0.8
1,005,528	+		AO353_04665	0.20	+3.4
1,005,528	+		AO353_04665	0.20	+2.4
1,005,528	+		AO353_04665	0.20	-0.2
1,005,529	+		AO353_04665	0.20	-1.0
1,005,529	-		AO353_04665	0.20	-2.3
1,005,529	-		AO353_04665	0.20	+1.8
1,005,529	-		AO353_04665	0.20	-0.3
1,005,529	-		AO353_04665	0.20	+0.7
1,005,529	-		AO353_04665	0.20	+0.5
1,005,529	-		AO353_04665	0.20	+0.0
1,005,529	-		AO353_04665	0.20	+1.1
1,005,529	-		AO353_04665	0.20	-0.6
1,005,529	-		AO353_04665	0.20	-1.3
1,005,529	-		AO353_04665	0.20	-1.5
1,005,529	-		AO353_04665	0.20	+0.2
1,005,529	-		AO353_04665	0.20	+0.0
1,005,570	+		AO353_04665	0.23	-1.9
1,005,570	+		AO353_04665	0.23	-2.9
1,005,570	+		AO353_04665	0.23	-0.1
1,005,570	+		AO353_04665	0.23	+1.8
1,005,570	+		AO353_04665	0.23	+1.8
1,005,570	+		AO353_04665	0.23	+0.8
1,005,570	+		AO353_04665	0.23	-0.2
1,005,570	+		AO353_04665	0.23	-0.2
1,005,570	+		AO353_04665	0.23	+0.2
1,005,570	+		AO353_04665	0.23	+0.8
1,005,570	+		AO353_04665	0.23	+0.2
1,005,571	-		AO353_04665	0.23	+0.8
1,005,571	-		AO353_04665	0.23	-0.5
1,005,571	-		AO353_04665	0.23	-0.8
1,005,571	-		AO353_04665	0.23	-1.6
1,005,571	-		AO353_04665	0.23	+0.8
1,005,571	-		AO353_04665	0.23	-1.2
1,005,571	-		AO353_04665	0.23	+1.2
1,005,571	-		AO353_04665	0.23	+2.8
1,005,571	-		AO353_04665	0.23	-1.2
1,005,571	-		AO353_04665	0.23	+0.8
1,005,571	-		AO353_04665	0.23	+0.5
1,005,589	+		AO353_04665	0.24	+1.8
1,005,589	+		AO353_04665	0.24	-2.2
1,005,589	+		AO353_04665	0.24	+1.2
1,005,589	+		AO353_04665	0.24	+0.2
1,005,589	+		AO353_04665	0.24	-0.2
1,005,589	+		AO353_04665	0.24	+1.2
1,005,590	-		AO353_04665	0.25	+0.0
1,005,590	-		AO353_04665	0.25	+1.8