Experiment: Nitrate reduction, replicate B
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02360 and AO353_02365 are separated by 51 nucleotides AO353_02365 and AO353_02370 are separated by 121 nucleotides
AO353_02360: AO353_02360 - Patatin, at 501,976 to 503,148
_02360
AO353_02365: AO353_02365 - lipid A biosynthesis lauroyl acyltransferase, at 503,200 to 504,132
_02365
AO353_02370: AO353_02370 - septum formation inhibitor, at 504,254 to 504,991
_02370
Position (kb) 503
504
505 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 502.266 kb on + strand, within AO353_02360 at 502.267 kb on - strand, within AO353_02360 at 502.344 kb on + strand, within AO353_02360 at 502.344 kb on + strand, within AO353_02360 at 502.344 kb on + strand, within AO353_02360 at 502.344 kb on + strand, within AO353_02360 at 502.344 kb on + strand, within AO353_02360 at 502.344 kb on + strand, within AO353_02360 at 502.344 kb on + strand, within AO353_02360 at 502.344 kb on + strand, within AO353_02360 at 502.345 kb on - strand, within AO353_02360 at 502.345 kb on - strand, within AO353_02360 at 502.345 kb on - strand, within AO353_02360 at 502.345 kb on - strand, within AO353_02360 at 502.345 kb on - strand, within AO353_02360 at 502.397 kb on + strand, within AO353_02360 at 502.397 kb on + strand, within AO353_02360 at 502.397 kb on + strand, within AO353_02360 at 502.398 kb on - strand, within AO353_02360 at 502.398 kb on - strand, within AO353_02360 at 502.398 kb on - strand, within AO353_02360 at 502.417 kb on - strand, within AO353_02360 at 502.533 kb on - strand, within AO353_02360 at 502.615 kb on + strand, within AO353_02360 at 502.667 kb on + strand, within AO353_02360 at 502.667 kb on + strand, within AO353_02360 at 502.667 kb on + strand, within AO353_02360 at 502.667 kb on + strand, within AO353_02360 at 502.667 kb on + strand, within AO353_02360 at 502.667 kb on + strand, within AO353_02360 at 502.667 kb on + strand, within AO353_02360 at 502.667 kb on + strand, within AO353_02360 at 502.668 kb on - strand, within AO353_02360 at 502.668 kb on - strand, within AO353_02360 at 502.893 kb on + strand, within AO353_02360 at 502.893 kb on + strand, within AO353_02360 at 502.893 kb on + strand, within AO353_02360 at 502.897 kb on + strand, within AO353_02360 at 502.897 kb on + strand, within AO353_02360 at 502.897 kb on + strand, within AO353_02360 at 502.898 kb on - strand, within AO353_02360 at 502.898 kb on - strand, within AO353_02360 at 502.898 kb on - strand, within AO353_02360 at 502.898 kb on - strand, within AO353_02360 at 502.898 kb on - strand, within AO353_02360 at 503.128 kb on - strand at 503.182 kb on + strand at 503.182 kb on + strand at 503.182 kb on + strand at 503.183 kb on - strand at 504.169 kb on - strand at 504.169 kb on - strand at 504.169 kb on - strand at 504.169 kb on - strand at 504.169 kb on - strand at 504.169 kb on - strand at 504.169 kb on - strand at 504.212 kb on + strand at 504.212 kb on + strand at 504.212 kb on + strand at 504.212 kb on + strand at 504.213 kb on - strand at 504.228 kb on + strand at 504.228 kb on + strand at 504.244 kb on + strand at 504.791 kb on + strand, within AO353_02370 at 504.945 kb on + strand at 505.085 kb on + strand at 505.085 kb on + strand at 505.132 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nitrate reduction, replicate B remove 502,266 + AO353_02360 0.25 -1.5 502,267 - AO353_02360 0.25 -1.3 502,344 + AO353_02360 0.31 +0.3 502,344 + AO353_02360 0.31 -0.3 502,344 + AO353_02360 0.31 -0.5 502,344 + AO353_02360 0.31 -0.7 502,344 + AO353_02360 0.31 +0.5 502,344 + AO353_02360 0.31 +0.9 502,344 + AO353_02360 0.31 -0.5 502,344 + AO353_02360 0.31 -0.5 502,345 - AO353_02360 0.31 +0.9 502,345 - AO353_02360 0.31 -0.1 502,345 - AO353_02360 0.31 +1.1 502,345 - AO353_02360 0.31 +0.3 502,345 - AO353_02360 0.31 -1.6 502,397 + AO353_02360 0.36 -0.9 502,397 + AO353_02360 0.36 -0.8 502,397 + AO353_02360 0.36 -1.6 502,398 - AO353_02360 0.36 -0.7 502,398 - AO353_02360 0.36 +0.3 502,398 - AO353_02360 0.36 -0.7 502,417 - AO353_02360 0.38 +2.4 502,533 - AO353_02360 0.47 -0.8 502,615 + AO353_02360 0.54 -1.3 502,667 + AO353_02360 0.59 -1.7 502,667 + AO353_02360 0.59 -1.1 502,667 + AO353_02360 0.59 -1.5 502,667 + AO353_02360 0.59 +1.3 502,667 + AO353_02360 0.59 +0.9 502,667 + AO353_02360 0.59 -0.8 502,667 + AO353_02360 0.59 -1.8 502,667 + AO353_02360 0.59 -1.0 502,668 - AO353_02360 0.59 +0.6 502,668 - AO353_02360 0.59 +1.4 502,893 + AO353_02360 0.78 -0.5 502,893 + AO353_02360 0.78 -0.3 502,893 + AO353_02360 0.78 +2.9 502,897 + AO353_02360 0.79 -0.5 502,897 + AO353_02360 0.79 -0.6 502,897 + AO353_02360 0.79 -0.7 502,898 - AO353_02360 0.79 -0.3 502,898 - AO353_02360 0.79 -0.8 502,898 - AO353_02360 0.79 -0.6 502,898 - AO353_02360 0.79 -1.0 502,898 - AO353_02360 0.79 +0.1 503,128 - +0.9 503,182 + +0.3 503,182 + -0.1 503,182 + -0.9 503,183 - -0.8 504,169 - +0.3 504,169 - +0.1 504,169 - +1.1 504,169 - -1.1 504,169 - +1.9 504,169 - +0.9 504,169 - -0.1 504,212 + -1.1 504,212 + -0.7 504,212 + +0.9 504,212 + -0.4 504,213 - +1.9 504,228 + -1.3 504,228 + -1.3 504,244 + -0.8 504,791 + AO353_02370 0.73 +1.9 504,945 + -0.9 505,085 + -0.1 505,085 + -0.5 505,132 + +1.9
Or see this region's nucleotide sequence