Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00550

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
114,673	+				+1.9
114,673	+				+2.3
114,673	+				-0.4
114,674	-				-0.4
114,674	-				-0.1
114,674	-				+1.1
114,674	-				+0.3
114,674	-				-2.5
114,674	-				-0.7
114,674	-				+0.1
114,679	+				-1.9
114,679	+				+0.9
114,679	+				-1.0
114,679	+				-1.4
114,680	-				-0.9
114,680	-				-0.4
114,680	-				-1.1
114,680	-				-0.9
114,680	-				-0.7
114,713	-				+3.5
114,713	-				-1.4
114,713	-				-1.5
114,713	-				-1.9
114,713	-				+0.3
114,713	-				+0.1
114,750	-				-2.3
114,835	+				+0.2
114,881	+				-0.2
114,881	+				-1.3
114,882	-				-1.2
114,957	-				+0.9
114,996	-				-0.5
115,143	+		AO353_00550	0.15	+1.9
115,143	+		AO353_00550	0.15	-0.4
115,143	+		AO353_00550	0.15	-1.8
115,144	-		AO353_00550	0.15	-0.5
115,144	-		AO353_00550	0.15	+0.7
115,144	-		AO353_00550	0.15	-1.1
115,144	-		AO353_00550	0.15	-1.5
115,144	-		AO353_00550	0.15	-0.2
115,357	-		AO353_00550	0.30	-1.5
115,357	-		AO353_00550	0.30	-2.0
115,398	+		AO353_00550	0.33	-1.1
115,398	+		AO353_00550	0.33	-0.8
115,398	+		AO353_00550	0.33	+0.1
115,398	+		AO353_00550	0.33	+0.4
115,398	+		AO353_00550	0.33	-0.1
115,398	+		AO353_00550	0.33	+2.3
115,399	-		AO353_00550	0.33	-0.4
115,399	-		AO353_00550	0.33	+0.6
115,399	-		AO353_00550	0.33	+0.3
115,399	-		AO353_00550	0.33	+0.1
115,399	-		AO353_00550	0.33	-1.5
115,399	-		AO353_00550	0.33	+0.8
115,399	-		AO353_00550	0.33	+0.9
115,399	-		AO353_00550	0.33	-0.7
115,399	-		AO353_00550	0.33	-2.7
115,401	+		AO353_00550	0.34	-1.7
115,401	+		AO353_00550	0.34	-1.9
115,401	+		AO353_00550	0.34	+0.9
115,401	+		AO353_00550	0.34	-1.2
115,401	+		AO353_00550	0.34	-0.5
115,401	+		AO353_00550	0.34	+1.3
115,401	+		AO353_00550	0.34	-0.9
115,401	+		AO353_00550	0.34	-1.7
115,401	+		AO353_00550	0.34	-0.1
115,401	+		AO353_00550	0.34	-0.7
115,402	-		AO353_00550	0.34	-0.4
115,402	-		AO353_00550	0.34	-0.4
115,402	-		AO353_00550	0.34	-0.1
115,402	-		AO353_00550	0.34	+0.6
115,402	-		AO353_00550	0.34	-0.4
115,402	-		AO353_00550	0.34	+0.8
115,405	+		AO353_00550	0.34	-0.1
115,405	+		AO353_00550	0.34	-1.2
115,405	+		AO353_00550	0.34	-2.0
115,405	+		AO353_00550	0.34	+0.5
115,405	+		AO353_00550	0.34	+1.2
115,405	+		AO353_00550	0.34	+0.3
115,405	+		AO353_00550	0.34	-0.8
115,405	+		AO353_00550	0.34	-0.4
115,406	-		AO353_00550	0.34	-0.4
115,406	-		AO353_00550	0.34	-2.4
115,406	-		AO353_00550	0.34	-0.7
115,406	-		AO353_00550	0.34	+0.5
115,416	+		AO353_00550	0.35	-0.1
115,416	+		AO353_00550	0.35	-1.1
115,417	-		AO353_00550	0.35	-2.1
115,417	-		AO353_00550	0.35	-0.7
115,417	-		AO353_00550	0.35	-0.7
115,471	+		AO353_00550	0.39	-1.2
115,471	+		AO353_00550	0.39	-1.4
115,471	+		AO353_00550	0.39	-0.4
115,472	-		AO353_00550	0.39	-1.2
115,472	-		AO353_00550	0.39	-1.9
115,472	-		AO353_00550	0.39	-0.2
115,472	-		AO353_00550	0.39	+0.9
115,472	-		AO353_00550	0.39	-0.8
115,472	-		AO353_00550	0.39	-3.0
115,472	-		AO353_00550	0.39	-1.9
115,494	+		AO353_00550	0.40	-0.9
115,494	+		AO353_00550	0.40	-0.7
115,494	+		AO353_00550	0.40	-0.9
115,494	+		AO353_00550	0.40	-1.4
115,495	-		AO353_00550	0.40	+0.9
115,495	-		AO353_00550	0.40	-0.1
115,495	-		AO353_00550	0.40	+0.3
115,506	+		AO353_00550	0.41	-1.8
115,506	+		AO353_00550	0.41	+0.0
115,506	+		AO353_00550	0.41	-2.5
115,506	+		AO353_00550	0.41	-0.5
115,506	+		AO353_00550	0.41	-0.2
115,507	-		AO353_00550	0.41	+0.9
115,507	-		AO353_00550	0.41	-1.0
115,507	-		AO353_00550	0.41	+0.2
115,507	-		AO353_00550	0.41	+0.2
115,507	-		AO353_00550	0.41	+1.3
115,507	-		AO353_00550	0.41	-1.4
115,620	+		AO353_00550	0.49	+0.1
115,620	+		AO353_00550	0.49	-2.6
115,620	+		AO353_00550	0.49	+2.5
115,620	+		AO353_00550	0.49	-1.1
115,620	+		AO353_00550	0.49	+0.3
115,620	+		AO353_00550	0.49	+0.5
115,620	+		AO353_00550	0.49	+0.8
115,620	+		AO353_00550	0.49	+0.3
115,620	+		AO353_00550	0.49	-2.2
115,620	+		AO353_00550	0.49	-1.1
115,620	+		AO353_00550	0.49	+0.9
115,621	-		AO353_00550	0.49	-1.7
115,621	-		AO353_00550	0.49	+1.3
115,621	-		AO353_00550	0.49	-0.8
115,621	-		AO353_00550	0.49	-0.7
115,621	-		AO353_00550	0.49	-0.1
115,621	-		AO353_00550	0.49	+1.0
115,621	-		AO353_00550	0.49	-1.5
115,621	-		AO353_00550	0.49	-0.2
115,621	-		AO353_00550	0.49	+2.5
115,715	-		AO353_00550	0.56	+0.3
115,834	-		AO353_00550	0.64	+0.3
115,834	-		AO353_00550	0.64	-0.9
115,876	+		AO353_00550	0.67	-0.7
115,877	-		AO353_00550	0.67	-0.5
115,998	+		AO353_00550	0.76	-0.9
115,998	+		AO353_00550	0.76	-1.4
116,046	+		AO353_00550	0.79	+0.3
116,047	-		AO353_00550	0.79	-0.7
116,058	+		AO353_00550	0.80	-1.0
116,059	-		AO353_00550	0.80	-2.2
116,152	-		AO353_00550	0.87	-0.1
116,178	+		AO353_00550	0.89	-1.5
116,178	+		AO353_00550	0.89	-0.7
116,179	-		AO353_00550	0.89	-0.7
116,179	-		AO353_00550	0.89	-1.6
116,179	-		AO353_00550	0.89	-0.8
116,179	-		AO353_00550	0.89	-0.9
116,335	-				-1.5
116,335	-				-1.5
116,743	+				+1.7
116,743	+				+0.7
116,743	+				-0.4
116,744	-				+1.5
116,744	-				-0.4
116,744	-				+0.9
116,858	+				-0.4
116,858	+				-1.4
116,859	-				-2.4
116,859	-				-2.1
116,904	+				-1.5
116,904	+				+0.6
116,905	-				+0.3
116,905	-				+1.9
116,905	-				-1.7
116,992	-		AO353_00560	0.14	+0.2
116,992	-		AO353_00560	0.14	-3.1
116,992	-		AO353_00560	0.14	+0.9
117,139	+		AO353_00560	0.28	-0.9
117,139	+		AO353_00560	0.28	-1.4
117,140	-		AO353_00560	0.28	-0.1
117,140	-		AO353_00560	0.28	+0.3
117,140	-		AO353_00560	0.28	-0.4