Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00545

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
112,580	+		AO353_00535	0.81	+1.9
112,580	+		AO353_00535	0.81	-0.7
112,581	-		AO353_00535	0.81	+1.4
112,581	-		AO353_00535	0.81	-0.8
112,581	-		AO353_00535	0.81	-0.5
112,598	+		AO353_00535	0.82	+3.5
112,599	-		AO353_00535	0.82	+0.6
112,599	-		AO353_00535	0.82	+0.5
112,806	+				+0.5
112,807	-				-0.1
112,807	-				+0.1
112,807	-				-0.4
112,807	-				-0.1
112,965	+				+1.4
112,965	+				-0.2
112,965	+				-0.8
112,966	-				+0.3
112,992	+				+0.6
113,012	+				-1.4
113,013	-				+0.9
113,016	+				+2.5
113,016	+				-0.4
113,016	+				-0.4
113,016	+				-1.3
113,016	+				+0.9
113,016	+				+1.9
113,016	+				-0.9
113,017	-				-0.5
113,017	-				+0.3
113,017	-				-1.4
113,017	-				+1.5
113,017	-				+0.2
113,017	-				-0.1
113,017	-				+1.9
113,031	+				-0.5
113,031	+				-0.4
113,032	-				-0.2
113,032	-				-0.7
113,032	-				-0.7
113,038	+				-1.0
113,038	+				-0.1
113,038	+				-0.3
113,038	+				-1.1
113,038	+				+1.2
113,038	+				+1.7
113,039	-				-1.0
113,039	-				-0.5
113,039	-				+1.9
113,039	-				-1.9
113,039	-				-0.1
113,039	-				+1.1
113,039	-				+0.3
113,039	-				+0.1
113,039	-				+1.7
113,039	-				+1.9
113,053	+				-1.4
113,054	-				-1.1
113,054	-				+0.9
113,054	-				+0.3
113,078	+				-1.2
113,078	+				-0.5
113,095	+				-0.4
113,095	+				-0.5
113,116	-				-0.9
113,150	+				-0.7
113,150	+				-2.9
113,155	+				-0.9
113,155	+				+0.9
113,155	+				-0.7
113,155	+				+1.3
113,156	-				+1.9
113,156	-				-0.7
113,156	-				-0.5
113,156	-				-0.4
113,285	+		AO353_00540	0.56	-1.2
113,286	-		AO353_00540	0.56	+1.3
113,301	+		AO353_00540	0.64	-0.4
113,301	+		AO353_00540	0.64	-0.1
113,301	+		AO353_00540	0.64	-0.4
113,301	+		AO353_00540	0.64	+2.5
113,302	-		AO353_00540	0.65	-2.3
113,302	-		AO353_00540	0.65	-1.2
113,302	-		AO353_00540	0.65	-0.4
113,365	+				+0.3
113,365	+				+0.9
113,366	-				-0.1
113,366	-				-2.0
113,366	-				-0.1
113,366	-				-0.4
113,369	+				-0.2
113,369	+				+0.9
113,369	+				-0.2
113,369	+				-0.7
113,369	+				+0.6
113,370	-				-0.1
113,370	-				+1.5
113,370	-				+0.8
113,375	+				-0.4
113,375	+				-0.9
113,375	+				+0.2
113,375	+				+0.9
113,375	+				+0.9
113,375	+				+0.9
113,375	+				-0.7
113,375	+				-1.2
113,375	+				-0.1
113,375	+				-1.2
113,376	-				-1.5
113,376	-				-0.2
113,376	-				-1.2
113,376	-				-2.2
113,376	-				+1.1
113,376	-				+1.5
113,376	-				-0.2
113,411	+				+0.9
113,411	+				-0.4
113,412	-				+0.3
113,412	-				-0.1
113,418	+				+0.3
113,418	+				-1.8
113,419	-				+1.2
113,419	-				-0.2
113,444	+				-2.1
113,444	+				-0.1
113,445	-				-0.7
113,463	+				+0.1
113,464	-				+1.2
113,464	-				+0.3
113,464	-				+1.9
113,464	-				-1.0
113,836	+		AO353_00545	0.29	+0.3
114,673	+				+1.9
114,673	+				+2.3
114,673	+				-0.4
114,674	-				-0.4
114,674	-				-0.1
114,674	-				+1.1
114,674	-				+0.3
114,674	-				-2.5
114,674	-				-0.7
114,674	-				+0.1
114,679	+				-1.9
114,679	+				+0.9
114,679	+				-1.0
114,679	+				-1.4
114,680	-				-0.9
114,680	-				-0.4
114,680	-				-1.1
114,680	-				-0.9
114,680	-				-0.7
114,713	-				+3.5
114,713	-				-1.4
114,713	-				-1.5
114,713	-				-1.9
114,713	-				+0.3
114,713	-				+0.1
114,750	-				-2.3
114,835	+				+0.2
114,881	+				-0.2
114,881	+				-1.3
114,882	-				-1.2
114,957	-				+0.9
114,996	-				-0.5
115,143	+		AO353_00550	0.15	+1.9
115,143	+		AO353_00550	0.15	-0.4
115,143	+		AO353_00550	0.15	-1.8
115,144	-		AO353_00550	0.15	-0.5
115,144	-		AO353_00550	0.15	+0.7
115,144	-		AO353_00550	0.15	-1.1
115,144	-		AO353_00550	0.15	-1.5
115,144	-		AO353_00550	0.15	-0.2
115,357	-		AO353_00550	0.30	-1.5
115,357	-		AO353_00550	0.30	-2.0
115,398	+		AO353_00550	0.33	-1.1
115,398	+		AO353_00550	0.33	-0.8
115,398	+		AO353_00550	0.33	+0.1
115,398	+		AO353_00550	0.33	+0.4
115,398	+		AO353_00550	0.33	-0.1
115,398	+		AO353_00550	0.33	+2.3
115,399	-		AO353_00550	0.33	-0.4
115,399	-		AO353_00550	0.33	+0.6
115,399	-		AO353_00550	0.33	+0.3
115,399	-		AO353_00550	0.33	+0.1
115,399	-		AO353_00550	0.33	-1.5
115,399	-		AO353_00550	0.33	+0.8
115,399	-		AO353_00550	0.33	+0.9
115,399	-		AO353_00550	0.33	-0.7
115,399	-		AO353_00550	0.33	-2.7
115,401	+		AO353_00550	0.34	-1.7
115,401	+		AO353_00550	0.34	-1.9
115,401	+		AO353_00550	0.34	+0.9
115,401	+		AO353_00550	0.34	-1.2
115,401	+		AO353_00550	0.34	-0.5
115,401	+		AO353_00550	0.34	+1.3
115,401	+		AO353_00550	0.34	-0.9
115,401	+		AO353_00550	0.34	-1.7
115,401	+		AO353_00550	0.34	-0.1
115,401	+		AO353_00550	0.34	-0.7
115,402	-		AO353_00550	0.34	-0.4
115,402	-		AO353_00550	0.34	-0.4
115,402	-		AO353_00550	0.34	-0.1
115,402	-		AO353_00550	0.34	+0.6
115,402	-		AO353_00550	0.34	-0.4
115,402	-		AO353_00550	0.34	+0.8
115,405	+		AO353_00550	0.34	-0.1
115,405	+		AO353_00550	0.34	-1.2
115,405	+		AO353_00550	0.34	-2.0
115,405	+		AO353_00550	0.34	+0.5
115,405	+		AO353_00550	0.34	+1.2
115,405	+		AO353_00550	0.34	+0.3
115,405	+		AO353_00550	0.34	-0.8
115,405	+		AO353_00550	0.34	-0.4
115,406	-		AO353_00550	0.34	-0.4
115,406	-		AO353_00550	0.34	-2.4
115,406	-		AO353_00550	0.34	-0.7
115,406	-		AO353_00550	0.34	+0.5
115,416	+		AO353_00550	0.35	-0.1
115,416	+		AO353_00550	0.35	-1.1
115,417	-		AO353_00550	0.35	-2.1
115,417	-		AO353_00550	0.35	-0.7
115,417	-		AO353_00550	0.35	-0.7
115,471	+		AO353_00550	0.39	-1.2
115,471	+		AO353_00550	0.39	-1.4
115,471	+		AO353_00550	0.39	-0.4
115,472	-		AO353_00550	0.39	-1.2
115,472	-		AO353_00550	0.39	-1.9
115,472	-		AO353_00550	0.39	-0.2
115,472	-		AO353_00550	0.39	+0.9
115,472	-		AO353_00550	0.39	-0.8
115,472	-		AO353_00550	0.39	-3.0
115,472	-		AO353_00550	0.39	-1.9
115,494	+		AO353_00550	0.40	-0.9
115,494	+		AO353_00550	0.40	-0.7
115,494	+		AO353_00550	0.40	-0.9
115,494	+		AO353_00550	0.40	-1.4
115,495	-		AO353_00550	0.40	+0.9
115,495	-		AO353_00550	0.40	-0.1
115,495	-		AO353_00550	0.40	+0.3
115,506	+		AO353_00550	0.41	-1.8
115,506	+		AO353_00550	0.41	+0.0
115,506	+		AO353_00550	0.41	-2.5
115,506	+		AO353_00550	0.41	-0.5
115,506	+		AO353_00550	0.41	-0.2
115,507	-		AO353_00550	0.41	+0.9
115,507	-		AO353_00550	0.41	-1.0
115,507	-		AO353_00550	0.41	+0.2
115,507	-		AO353_00550	0.41	+0.2
115,507	-		AO353_00550	0.41	+1.3
115,507	-		AO353_00550	0.41	-1.4
115,620	+		AO353_00550	0.49	+0.1
115,620	+		AO353_00550	0.49	-2.6
115,620	+		AO353_00550	0.49	+2.5
115,620	+		AO353_00550	0.49	-1.1
115,620	+		AO353_00550	0.49	+0.3
115,620	+		AO353_00550	0.49	+0.5
115,620	+		AO353_00550	0.49	+0.8
115,620	+		AO353_00550	0.49	+0.3
115,620	+		AO353_00550	0.49	-2.2
115,620	+		AO353_00550	0.49	-1.1
115,620	+		AO353_00550	0.49	+0.9
115,621	-		AO353_00550	0.49	-1.7
115,621	-		AO353_00550	0.49	+1.3
115,621	-		AO353_00550	0.49	-0.8
115,621	-		AO353_00550	0.49	-0.7
115,621	-		AO353_00550	0.49	-0.1
115,621	-		AO353_00550	0.49	+1.0
115,621	-		AO353_00550	0.49	-1.5
115,621	-		AO353_00550	0.49	-0.2
115,621	-		AO353_00550	0.49	+2.5