Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5748

Experiment: RCH2 defined with Thallium(I) acetate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2 defined with Thallium(I) acetate 0.002 mg/ml
6,563,057	-				-2.1
6,563,134	+				+0.4
6,563,221	-		Pf6N2E2_5747	0.16	+1.2
6,563,390	+		Pf6N2E2_5747	0.44	+1.4
6,563,391	-		Pf6N2E2_5747	0.44	+0.9
6,563,391	-		Pf6N2E2_5747	0.44	+0.1
6,563,391	-		Pf6N2E2_5747	0.44	-0.2
6,563,510	-		Pf6N2E2_5747	0.64	-1.4
6,563,559	-		Pf6N2E2_5747	0.72	+0.5
6,563,606	+		Pf6N2E2_5747	0.79	+0.1
6,563,606	+		Pf6N2E2_5747	0.79	+0.2
6,563,761	+				-1.3
6,563,761	+				-0.2
6,563,761	+				+1.4
6,563,761	+				-2.1
6,563,762	-				+0.7
6,563,762	-				-2.1
6,563,763	+				-0.7
6,563,763	+				+0.3
6,563,763	+				-2.1
6,563,763	+				+0.0
6,563,764	-				+0.8
6,563,764	-				-0.1
6,563,882	+				+0.9
6,563,882	+				+1.9
6,563,882	+				-1.1
6,563,882	+				-0.1
6,563,883	-				+0.8
6,563,883	-				+0.6
6,563,883	-				+0.9
6,563,883	-				+1.1
6,564,003	+		Pf6N2E2_5748	0.31	-1.9
6,564,004	-		Pf6N2E2_5748	0.31	-0.2
6,564,004	-		Pf6N2E2_5748	0.31	-0.5
6,564,142	-		Pf6N2E2_5748	0.81	-0.1
6,564,189	+				-1.2
6,564,189	+				+0.9
6,564,190	-				+0.5
6,564,190	-				-0.3
6,564,190	-				+0.9
6,564,219	+				+0.9
6,564,220	-				+0.0
6,564,220	-				+1.3
6,564,220	-				-2.2
6,564,220	-				-1.1
6,564,220	-				-1.4
6,564,220	-				-2.1
6,564,220	-				+1.7
6,564,322	+				-0.2
6,564,324	+				-0.1
6,564,360	+				+0.9
6,564,360	+				+0.2
6,564,361	-				-0.7
6,564,376	+		Pf6N2E2_5749	0.15	+0.9
6,564,377	-		Pf6N2E2_5749	0.16	-2.7
6,564,377	-		Pf6N2E2_5749	0.16	-0.5
6,564,431	-		Pf6N2E2_5749	0.51	+0.9
6,564,431	-		Pf6N2E2_5749	0.51	+0.9
6,564,507	+				-0.5
6,564,507	+				+1.3
6,564,507	+				-0.2
6,564,507	+				-1.9
6,564,507	+				+1.1
6,564,507	+				+0.2
6,564,507	+				-1.1
6,564,507	+				-2.1
6,564,508	-				+0.3
6,564,508	-				+0.9
6,564,508	-				-2.4
6,564,508	-				+0.9
6,564,508	-				+0.2
6,564,551	+				-0.3
6,564,552	-				-0.7
6,564,552	-				+1.9
6,564,553	+				+1.2
6,564,554	-				-0.1
6,564,555	+				+1.2
6,564,555	+				+1.5
6,564,625	+		Pf6N2E2_5750	0.15	-1.2
6,564,625	+		Pf6N2E2_5750	0.15	+0.9
6,564,625	+		Pf6N2E2_5750	0.15	+1.0
6,564,628	+		Pf6N2E2_5750	0.16	+0.7
6,564,628	+		Pf6N2E2_5750	0.16	-0.0
6,564,671	-		Pf6N2E2_5750	0.26	+0.9
6,564,763	-		Pf6N2E2_5750	0.49	-1.1
6,564,763	-		Pf6N2E2_5750	0.49	+0.5
6,564,763	-		Pf6N2E2_5750	0.49	+0.3
6,564,912	+		Pf6N2E2_5750	0.86	-0.1
6,564,913	-		Pf6N2E2_5750	0.86	+0.8
6,564,996	+				-2.3
6,564,998	+				-0.2
6,565,000	+				-0.2