Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1383

Experiment: RCH2 defined with Thallium(I) acetate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2 defined with Thallium(I) acetate 0.002 mg/ml
1,623,811	-		Pf6N2E2_1382	0.80	-1.0
1,623,861	+		Pf6N2E2_1382	0.83	+0.0
1,623,861	+		Pf6N2E2_1382	0.83	-0.7
1,623,862	-		Pf6N2E2_1382	0.83	+1.1
1,623,877	-		Pf6N2E2_1382	0.84	+0.8
1,623,877	-		Pf6N2E2_1382	0.84	-0.7
1,623,877	-		Pf6N2E2_1382	0.84	+2.3
1,623,877	-		Pf6N2E2_1382	0.84	-0.7
1,624,002	+				-3.2
1,624,003	-				+1.5
1,624,195	+				+0.3
1,624,288	-				+0.1
1,624,288	-				-0.0
1,624,288	-				-0.7
1,624,288	-				-1.6
1,624,359	-				+4.6
1,624,441	-				+0.3
1,624,441	-				+1.3
1,624,467	-				+0.1
1,624,472	-				+2.7
1,624,505	+				+0.5
1,624,506	-				+1.3
1,624,506	-				-0.7
1,624,660	-				-1.0
1,624,673	-				-0.8
1,624,692	-		Pf6N2E2_1383	0.10	-1.5
1,624,696	-		Pf6N2E2_1383	0.11	+0.3
1,624,796	-		Pf6N2E2_1383	0.20	-0.9
1,624,796	-		Pf6N2E2_1383	0.20	-2.0
1,624,833	-		Pf6N2E2_1383	0.23	+1.5
1,624,900	-		Pf6N2E2_1383	0.29	-2.0
1,625,015	-		Pf6N2E2_1383	0.40	+0.3
1,625,170	+		Pf6N2E2_1383	0.54	+0.3
1,625,194	-		Pf6N2E2_1383	0.56	-0.7
1,625,298	+		Pf6N2E2_1383	0.65	-0.7
1,625,477	-		Pf6N2E2_1383	0.82	-0.7
1,625,501	+		Pf6N2E2_1383	0.84	-1.7
1,625,515	-		Pf6N2E2_1383	0.85	-0.5
1,625,608	+				-0.1
1,625,608	+				-1.7
1,625,609	-				-1.8
1,625,677	+				-0.1
1,625,677	+				-2.2
1,625,678	-				-1.7
1,625,689	+				+0.6
1,625,689	+				-1.0
1,625,690	-				-0.0
1,625,690	-				+0.9
1,625,690	-				-0.7
1,625,693	-				+0.3
1,625,693	-				+0.0
1,625,745	-				+1.0
1,625,899	+				-0.7
1,625,997	+				+1.0
1,625,998	-				-1.2
1,625,998	-				+1.7
1,626,141	-				-1.2
1,626,254	+		Pf6N2E2_1384	0.20	+0.8
1,626,404	+		Pf6N2E2_1384	0.37	+2.3
1,626,404	+		Pf6N2E2_1384	0.37	+1.2
1,626,404	+		Pf6N2E2_1384	0.37	+0.3
1,626,405	-		Pf6N2E2_1384	0.37	-0.7
1,626,405	-		Pf6N2E2_1384	0.37	+1.0
1,626,590	+		Pf6N2E2_1384	0.57	+0.7
1,626,591	-		Pf6N2E2_1384	0.57	+0.3
1,626,591	-		Pf6N2E2_1384	0.57	-2.2