Strain Fitness in Ralstonia solanacearum IBSBF1503 around RALBFv3_RS07765

Experiment: water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
1,704,247	-		RALBFv3_RS07760	0.37	-2.0
1,704,247	-		RALBFv3_RS07760	0.37	-1.0
1,704,247	-		RALBFv3_RS07760	0.37	+0.2
1,704,247	-		RALBFv3_RS07760	0.37	+0.2
1,704,268	-		RALBFv3_RS07760	0.38	-0.5
1,704,268	-		RALBFv3_RS07760	0.38	-1.0
1,704,268	-		RALBFv3_RS07760	0.38	-0.7
1,704,296	+		RALBFv3_RS07760	0.40	-0.2
1,704,296	+		RALBFv3_RS07760	0.40	-0.8
1,704,296	+		RALBFv3_RS07760	0.40	+0.6
1,704,296	+		RALBFv3_RS07760	0.40	-0.1
1,704,296	+		RALBFv3_RS07760	0.40	-1.0
1,704,296	+		RALBFv3_RS07760	0.40	+0.8
1,704,296	+		RALBFv3_RS07760	0.40	+0.0
1,704,296	+		RALBFv3_RS07760	0.40	-1.2
1,704,296	+		RALBFv3_RS07760	0.40	+0.2
1,704,296	+		RALBFv3_RS07760	0.40	-0.6
1,704,297	-		RALBFv3_RS07760	0.41	+0.3
1,704,297	-		RALBFv3_RS07760	0.41	+1.5
1,704,297	-		RALBFv3_RS07760	0.41	+0.9
1,704,297	-		RALBFv3_RS07760	0.41	+1.8
1,704,297	-		RALBFv3_RS07760	0.41	-0.2
1,704,297	-		RALBFv3_RS07760	0.41	-0.9
1,704,297	-		RALBFv3_RS07760	0.41	-0.7
1,704,299	-		RALBFv3_RS07760	0.41	+0.1
1,704,299	-		RALBFv3_RS07760	0.41	+0.5
1,704,299	-		RALBFv3_RS07760	0.41	+0.8
1,704,299	-		RALBFv3_RS07760	0.41	-1.4
1,704,299	-		RALBFv3_RS07760	0.41	-1.0
1,704,299	-		RALBFv3_RS07760	0.41	+1.8
1,704,300	+		RALBFv3_RS07760	0.41	-0.7
1,704,300	+		RALBFv3_RS07760	0.41	+2.4
1,704,300	+		RALBFv3_RS07760	0.41	-2.5
1,704,300	+		RALBFv3_RS07760	0.41	-1.9
1,704,300	+		RALBFv3_RS07760	0.41	-0.4
1,704,300	+		RALBFv3_RS07760	0.41	-2.4
1,704,300	+		RALBFv3_RS07760	0.41	+0.3
1,704,300	+		RALBFv3_RS07760	0.41	-0.7
1,704,301	-		RALBFv3_RS07760	0.41	+0.5
1,704,301	-		RALBFv3_RS07760	0.41	+0.8
1,704,301	-		RALBFv3_RS07760	0.41	-0.5
1,704,301	-		RALBFv3_RS07760	0.41	-1.7
1,704,301	-		RALBFv3_RS07760	0.41	-0.1
1,704,301	-		RALBFv3_RS07760	0.41	+0.8
1,704,301	-		RALBFv3_RS07760	0.41	-1.0
1,704,301	-		RALBFv3_RS07760	0.41	-0.3
1,704,301	-		RALBFv3_RS07760	0.41	-1.1
1,704,301	-		RALBFv3_RS07760	0.41	-1.5
1,704,301	-		RALBFv3_RS07760	0.41	+1.8
1,704,308	+		RALBFv3_RS07760	0.41	-0.8
1,704,308	+		RALBFv3_RS07760	0.41	-0.8
1,704,309	-		RALBFv3_RS07760	0.42	-0.5
1,704,309	-		RALBFv3_RS07760	0.42	-0.3
1,704,447	+		RALBFv3_RS07760	0.52	-0.2
1,704,447	+		RALBFv3_RS07760	0.52	+0.0
1,704,562	+		RALBFv3_RS07760	0.61	-0.0
1,704,563	-		RALBFv3_RS07760	0.61	+0.8
1,704,618	+		RALBFv3_RS07760	0.66	-0.3
1,704,618	+		RALBFv3_RS07760	0.66	-0.8
1,704,634	-		RALBFv3_RS07760	0.67	+1.2
1,704,707	+		RALBFv3_RS07760	0.73	+0.9
1,704,708	-		RALBFv3_RS07760	0.73	-0.1
1,704,743	+		RALBFv3_RS07760	0.75	-2.4
1,704,743	+		RALBFv3_RS07760	0.75	+0.5
1,704,743	+		RALBFv3_RS07760	0.75	-0.2
1,704,743	+		RALBFv3_RS07760	0.75	-0.5
1,704,790	+		RALBFv3_RS07760	0.79	-0.6
1,704,791	-		RALBFv3_RS07760	0.79	+0.1
1,704,791	-		RALBFv3_RS07760	0.79	-0.1
1,704,791	-		RALBFv3_RS07760	0.79	+0.8
1,704,888	-		RALBFv3_RS07760	0.87	+0.8
1,704,910	+		RALBFv3_RS07760	0.88	+2.8
1,704,911	-		RALBFv3_RS07760	0.88	+0.4
1,704,947	+				+1.5
1,704,947	+				+1.0
1,704,947	+				-0.3
1,704,947	+				-0.3
1,704,947	+				+0.2
1,704,947	+				-0.1
1,704,947	+				+0.2
1,704,947	+				-0.6
1,704,947	+				-0.4
1,704,947	+				-0.4
1,704,947	+				-0.3
1,704,947	+				-0.1
1,704,948	-				-1.8
1,704,948	-				-0.1
1,704,948	-				+0.1
1,704,948	-				+1.0
1,704,948	-				-1.5
1,704,948	-				-0.5
1,704,948	-				+0.2
1,704,948	-				+3.1
1,704,948	-				-0.6
1,704,948	-				-0.2
1,704,948	-				+1.3
1,704,948	-				-0.2
1,704,948	-				-0.4
1,704,949	+				+0.2
1,704,949	+				-0.3
1,704,949	+				+0.8
1,704,949	+				-0.2
1,704,949	+				-0.2
1,704,950	-				-1.5
1,705,057	+				-1.6
1,705,057	+				+0.7
1,705,112	+				+0.2
1,705,113	-				+0.4
1,705,113	-				-0.7
1,705,198	+				+0.1
1,705,199	-				+0.7
1,705,208	+				-0.6
1,705,208	+				+0.0
1,705,208	+				-0.1
1,705,208	+				+0.1
1,705,209	-				-0.2
1,705,209	-				-0.4
1,705,209	-				-1.5
1,705,209	-				+2.4
1,705,209	-				-1.8
1,705,209	-				-0.9
1,705,209	-				-0.4
1,705,209	-				-0.8
1,705,209	-				+0.8
1,705,210	+				+0.2
1,705,210	+				+0.0
1,705,211	-				-0.1
1,705,211	-				-0.5
1,705,211	-				-0.9
1,705,211	-				-0.1
1,705,211	-				+0.1
1,705,236	-				-0.3
1,705,255	+				+0.1
1,705,255	+				+0.5
1,705,255	+				-1.9
1,705,284	+				+1.1
1,705,285	-				-0.5
1,705,320	+				-2.0
1,705,321	-				-0.2
1,705,321	-				+1.5
1,705,401	-		RALBFv3_RS07765	0.12	-1.2
1,705,458	-		RALBFv3_RS07765	0.17	-0.3
1,705,484	+		RALBFv3_RS07765	0.19	-0.4
1,705,484	+		RALBFv3_RS07765	0.19	-2.0
1,705,484	+		RALBFv3_RS07765	0.19	-0.4
1,705,485	-		RALBFv3_RS07765	0.19	+1.4
1,705,532	+		RALBFv3_RS07765	0.23	-0.7
1,705,532	+		RALBFv3_RS07765	0.23	+1.8
1,705,532	+		RALBFv3_RS07765	0.23	+0.3
1,705,533	-		RALBFv3_RS07765	0.23	-1.5
1,705,533	-		RALBFv3_RS07765	0.23	+0.0
1,705,534	+		RALBFv3_RS07765	0.23	-0.4
1,705,641	+		RALBFv3_RS07765	0.31	+0.3
1,705,641	+		RALBFv3_RS07765	0.31	-1.0
1,705,642	-		RALBFv3_RS07765	0.31	-0.8
1,705,655	+		RALBFv3_RS07765	0.32	-0.3
1,705,655	+		RALBFv3_RS07765	0.32	+0.4
1,705,665	-		RALBFv3_RS07765	0.33	-0.1
1,705,764	+		RALBFv3_RS07765	0.41	-0.6
1,705,764	+		RALBFv3_RS07765	0.41	+0.4
1,705,764	+		RALBFv3_RS07765	0.41	-0.4
1,705,765	-		RALBFv3_RS07765	0.41	-0.6
1,705,765	-		RALBFv3_RS07765	0.41	-0.4
1,705,765	-		RALBFv3_RS07765	0.41	-0.2
1,705,765	-		RALBFv3_RS07765	0.41	-0.4
1,705,765	-		RALBFv3_RS07765	0.41	+0.5
1,705,765	-		RALBFv3_RS07765	0.41	-0.8
1,705,765	-		RALBFv3_RS07765	0.41	+0.1
1,705,765	-		RALBFv3_RS07765	0.41	-1.1
1,705,766	+		RALBFv3_RS07765	0.41	-0.4
1,705,767	-		RALBFv3_RS07765	0.41	+0.1
1,705,780	+		RALBFv3_RS07765	0.42	+1.3
1,705,780	+		RALBFv3_RS07765	0.42	-0.3
1,705,780	+		RALBFv3_RS07765	0.42	-0.9
1,705,780	+		RALBFv3_RS07765	0.42	-0.9
1,705,881	+		RALBFv3_RS07765	0.50	-1.0
1,705,881	+		RALBFv3_RS07765	0.50	-0.0
1,705,882	-		RALBFv3_RS07765	0.50	+0.3
1,705,882	-		RALBFv3_RS07765	0.50	-0.3
1,705,882	-		RALBFv3_RS07765	0.50	+0.2
1,705,882	-		RALBFv3_RS07765	0.50	+0.2
1,705,944	+		RALBFv3_RS07765	0.55	-0.3
1,706,084	+		RALBFv3_RS07765	0.66	+0.7
1,706,084	+		RALBFv3_RS07765	0.66	+0.4
1,706,084	+		RALBFv3_RS07765	0.66	-1.2
1,706,084	+		RALBFv3_RS07765	0.66	-0.2
1,706,084	+		RALBFv3_RS07765	0.66	+0.2
1,706,085	-		RALBFv3_RS07765	0.66	-1.1
1,706,085	-		RALBFv3_RS07765	0.66	+0.8
1,706,110	-		RALBFv3_RS07765	0.68	+0.6
1,706,222	-		RALBFv3_RS07765	0.76	+3.4
1,706,222	-		RALBFv3_RS07765	0.76	+0.5
1,706,227	+		RALBFv3_RS07765	0.77	-0.2
1,706,227	+		RALBFv3_RS07765	0.77	-0.8
1,706,227	+		RALBFv3_RS07765	0.77	+0.2
1,706,227	+		RALBFv3_RS07765	0.77	-2.2
1,706,227	+		RALBFv3_RS07765	0.77	+0.3
1,706,227	+		RALBFv3_RS07765	0.77	-0.5
1,706,227	+		RALBFv3_RS07765	0.77	+1.8
1,706,228	-		RALBFv3_RS07765	0.77	+0.1
1,706,228	-		RALBFv3_RS07765	0.77	+0.6
1,706,228	-		RALBFv3_RS07765	0.77	+3.0
1,706,233	+		RALBFv3_RS07765	0.77	-0.0
1,706,234	-		RALBFv3_RS07765	0.77	+2.4
1,706,274	+		RALBFv3_RS07765	0.80	+0.2
1,706,275	-		RALBFv3_RS07765	0.80	+0.8
1,706,275	-		RALBFv3_RS07765	0.80	+0.1
1,706,284	+		RALBFv3_RS07765	0.81	-0.2
1,706,285	-		RALBFv3_RS07765	0.81	+0.2
1,706,311	+		RALBFv3_RS07765	0.83	+1.3
1,706,349	+		RALBFv3_RS07765	0.86	-0.8
1,706,378	+		RALBFv3_RS07765	0.88	+0.7
1,706,378	+		RALBFv3_RS07765	0.88	-1.4
1,706,379	-		RALBFv3_RS07765	0.88	+1.5
1,706,379	-		RALBFv3_RS07765	0.88	-0.2
1,706,408	+				-1.0
1,706,408	+				-0.1
1,706,408	+				+0.1
1,706,408	+				+0.7
1,706,408	+				-0.3
1,706,408	+				+1.4
1,706,408	+				+0.9
1,706,408	+				+0.3
1,706,408	+				-0.8
1,706,408	+				-2.5
1,706,409	-				-0.0
1,706,409	-				+0.2
1,706,409	-				+0.1
1,706,409	-				+0.4
1,706,509	+				-0.2
1,706,509	+				-0.5
1,706,509	+				+0.4
1,706,509	+				-1.0
1,706,509	+				-0.1
1,706,509	+				+2.8
1,706,510	-				-0.2
1,706,510	-				+0.3
1,706,516	+				+0.3
1,706,516	+				-0.2
1,706,810	+				-1.8
1,706,810	+				-0.9
1,706,810	+				-0.1
1,706,810	+				+0.8
1,706,810	+				+0.8
1,706,811	-				+0.5
1,706,811	-				+0.3
1,706,811	-				+0.2
1,706,811	-				+0.1
1,706,811	-				+0.2
1,706,811	-				-0.4
1,706,816	+				+0.2
1,706,816	+				+0.4
1,706,816	+				-0.2
1,706,817	-				+0.8
1,706,817	-				-2.0
1,706,817	-				-0.7
1,706,930	+		RALBFv3_RS07770	0.19	+0.7
1,706,930	+		RALBFv3_RS07770	0.19	-2.1
1,706,930	+		RALBFv3_RS07770	0.19	-0.6
1,706,931	-		RALBFv3_RS07770	0.19	-0.8
1,706,931	-		RALBFv3_RS07770	0.19	-0.3
1,706,931	-		RALBFv3_RS07770	0.19	-1.3
1,706,931	-		RALBFv3_RS07770	0.19	+0.2
1,706,969	+		RALBFv3_RS07770	0.23	+0.1
1,706,969	+		RALBFv3_RS07770	0.23	-0.5
1,706,969	+		RALBFv3_RS07770	0.23	+0.4
1,706,970	-		RALBFv3_RS07770	0.23	-0.3
1,706,970	-		RALBFv3_RS07770	0.23	+2.4
1,707,017	+		RALBFv3_RS07770	0.28	-0.1
1,707,017	+		RALBFv3_RS07770	0.28	+0.2
1,707,017	+		RALBFv3_RS07770	0.28	+0.9
1,707,018	-		RALBFv3_RS07770	0.29	+0.8
1,707,018	-		RALBFv3_RS07770	0.29	-0.8
1,707,019	-		RALBFv3_RS07770	0.29	-1.2
1,707,049	+		RALBFv3_RS07770	0.32	+1.1
1,707,049	+		RALBFv3_RS07770	0.32	-0.0
1,707,050	-		RALBFv3_RS07770	0.32	+0.8
1,707,050	-		RALBFv3_RS07770	0.32	-0.4
1,707,050	-		RALBFv3_RS07770	0.32	+1.1
1,707,107	-		RALBFv3_RS07770	0.39	-2.0
1,707,130	+		RALBFv3_RS07770	0.41	-0.4
1,707,220	+		RALBFv3_RS07770	0.51	-0.1
1,707,220	+		RALBFv3_RS07770	0.51	+2.5
1,707,220	+		RALBFv3_RS07770	0.51	-0.8
1,707,220	+		RALBFv3_RS07770	0.51	+1.0
1,707,220	+		RALBFv3_RS07770	0.51	-0.5
1,707,220	+		RALBFv3_RS07770	0.51	-0.1
1,707,221	-		RALBFv3_RS07770	0.51	-0.2
1,707,221	-		RALBFv3_RS07770	0.51	-3.0
1,707,235	+		RALBFv3_RS07770	0.53	+0.8
1,707,236	-		RALBFv3_RS07770	0.53	-0.3
1,707,278	-		RALBFv3_RS07770	0.58	-1.4
1,707,278	-		RALBFv3_RS07770	0.58	-1.2
1,707,284	-		RALBFv3_RS07770	0.58	-1.2
1,707,284	-		RALBFv3_RS07770	0.58	+0.0
1,707,284	-		RALBFv3_RS07770	0.58	-0.6