Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5552

Experiment: RCH2_defined

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined
6,365,788	+				+1.0
6,365,788	+				-1.3
6,365,789	-				+0.4
6,365,789	-				+0.2
6,365,854	+				-1.0
6,365,855	-				+1.0
6,365,855	-				+0.6
6,365,898	-				+0.7
6,365,942	+		Pf6N2E2_5551	0.12	-0.3
6,365,943	-		Pf6N2E2_5551	0.12	-0.4
6,365,943	-		Pf6N2E2_5551	0.12	+1.0
6,365,943	-		Pf6N2E2_5551	0.12	+0.5
6,365,943	-		Pf6N2E2_5551	0.12	+0.5
6,365,943	-		Pf6N2E2_5551	0.12	+0.2
6,365,943	-		Pf6N2E2_5551	0.12	+0.6
6,365,943	-		Pf6N2E2_5551	0.12	+0.7
6,365,963	-		Pf6N2E2_5551	0.14	-0.4
6,365,963	-		Pf6N2E2_5551	0.14	+0.1
6,365,963	-		Pf6N2E2_5551	0.14	+1.0
6,365,969	+		Pf6N2E2_5551	0.15	+0.3
6,365,974	+		Pf6N2E2_5551	0.16	+0.9
6,366,041	+		Pf6N2E2_5551	0.23	+1.4
6,366,098	+		Pf6N2E2_5551	0.29	-0.0
6,366,098	+		Pf6N2E2_5551	0.29	+0.4
6,366,098	+		Pf6N2E2_5551	0.29	+1.9
6,366,099	-		Pf6N2E2_5551	0.29	-0.3
6,366,099	-		Pf6N2E2_5551	0.29	+0.8
6,366,170	+		Pf6N2E2_5551	0.37	-1.6
6,366,171	-		Pf6N2E2_5551	0.37	+0.2
6,366,606	+		Pf6N2E2_5551	0.84	+0.5
6,366,622	-		Pf6N2E2_5551	0.86	+0.7
6,366,812	+				-2.1
6,366,812	+				+0.7
6,366,813	-				+1.1
6,366,813	-				+0.3
6,366,826	-				+1.2
6,367,014	+		Pf6N2E2_5552	0.14	+0.3
6,367,015	-		Pf6N2E2_5552	0.14	-0.6
6,367,161	+		Pf6N2E2_5552	0.22	-0.0
6,367,161	+		Pf6N2E2_5552	0.22	+0.5
6,367,161	+		Pf6N2E2_5552	0.22	+0.7
6,367,301	+		Pf6N2E2_5552	0.30	+1.3
6,367,301	+		Pf6N2E2_5552	0.30	-1.5
6,367,301	+		Pf6N2E2_5552	0.30	-1.2
6,367,301	+		Pf6N2E2_5552	0.30	+1.0
6,367,302	-		Pf6N2E2_5552	0.30	+0.6
6,367,302	-		Pf6N2E2_5552	0.30	+0.7
6,367,302	-		Pf6N2E2_5552	0.30	+2.8
6,367,302	-		Pf6N2E2_5552	0.30	-0.6
6,367,351	+		Pf6N2E2_5552	0.32	+0.1
6,367,352	-		Pf6N2E2_5552	0.33	-0.5
6,367,596	+		Pf6N2E2_5552	0.46	+1.6
6,367,596	+		Pf6N2E2_5552	0.46	+2.2
6,367,596	+		Pf6N2E2_5552	0.46	-0.0
6,367,597	-		Pf6N2E2_5552	0.46	+0.2
6,367,597	-		Pf6N2E2_5552	0.46	+1.3
6,367,597	-		Pf6N2E2_5552	0.46	-0.6
6,367,629	+		Pf6N2E2_5552	0.48	+1.0
6,367,629	+		Pf6N2E2_5552	0.48	-0.5
6,367,629	+		Pf6N2E2_5552	0.48	-0.3
6,367,630	-		Pf6N2E2_5552	0.48	-0.2
6,367,630	-		Pf6N2E2_5552	0.48	-0.3
6,367,680	+		Pf6N2E2_5552	0.51	+0.2
6,367,680	+		Pf6N2E2_5552	0.51	-0.0
6,367,680	+		Pf6N2E2_5552	0.51	-1.3
6,367,681	-		Pf6N2E2_5552	0.51	+0.7
6,367,681	-		Pf6N2E2_5552	0.51	+0.4
6,367,681	-		Pf6N2E2_5552	0.51	+0.4
6,367,737	+		Pf6N2E2_5552	0.54	+0.3
6,367,737	+		Pf6N2E2_5552	0.54	-0.9
6,367,738	-		Pf6N2E2_5552	0.54	+0.4
6,367,738	-		Pf6N2E2_5552	0.54	-0.3
6,367,759	+		Pf6N2E2_5552	0.55	+0.5
6,367,836	+		Pf6N2E2_5552	0.59	+0.9
6,367,836	+		Pf6N2E2_5552	0.59	-0.9
6,367,836	+		Pf6N2E2_5552	0.59	+0.8
6,367,836	+		Pf6N2E2_5552	0.59	+0.5
6,367,836	+		Pf6N2E2_5552	0.59	-1.0
6,367,836	+		Pf6N2E2_5552	0.59	+0.7
6,367,836	+		Pf6N2E2_5552	0.59	-0.1
6,367,836	+		Pf6N2E2_5552	0.59	+1.0
6,367,837	-		Pf6N2E2_5552	0.59	+0.8
6,367,837	-		Pf6N2E2_5552	0.59	+1.4
6,367,837	-		Pf6N2E2_5552	0.59	+1.6
6,367,837	-		Pf6N2E2_5552	0.59	-0.7
6,367,842	+		Pf6N2E2_5552	0.59	+0.3
6,367,842	+		Pf6N2E2_5552	0.59	+0.3
6,367,843	-		Pf6N2E2_5552	0.60	+1.7
6,367,843	-		Pf6N2E2_5552	0.60	+1.2
6,367,843	-		Pf6N2E2_5552	0.60	+0.6
6,367,843	-		Pf6N2E2_5552	0.60	+0.2
6,367,843	-		Pf6N2E2_5552	0.60	+1.2
6,367,977	+		Pf6N2E2_5552	0.67	-1.2
6,367,977	+		Pf6N2E2_5552	0.67	+1.5
6,367,978	-		Pf6N2E2_5552	0.67	-0.6
6,367,978	-		Pf6N2E2_5552	0.67	-1.0
6,367,978	-		Pf6N2E2_5552	0.67	+1.5
6,367,978	-		Pf6N2E2_5552	0.67	+0.6
6,367,978	-		Pf6N2E2_5552	0.67	+1.2
6,367,983	+		Pf6N2E2_5552	0.67	-0.2
6,367,983	+		Pf6N2E2_5552	0.67	+1.2
6,367,984	-		Pf6N2E2_5552	0.67	-0.3
6,367,984	-		Pf6N2E2_5552	0.67	+0.9
6,367,984	-		Pf6N2E2_5552	0.67	+0.8
6,367,984	-		Pf6N2E2_5552	0.67	-0.6
6,367,986	+		Pf6N2E2_5552	0.67	+0.5
6,368,061	+		Pf6N2E2_5552	0.72	+0.1
6,368,061	+		Pf6N2E2_5552	0.72	+0.7
6,368,061	+		Pf6N2E2_5552	0.72	-0.2
6,368,061	+		Pf6N2E2_5552	0.72	+0.2
6,368,061	+		Pf6N2E2_5552	0.72	+1.0
6,368,062	-		Pf6N2E2_5552	0.72	+0.5
6,368,062	-		Pf6N2E2_5552	0.72	-0.6
6,368,062	-		Pf6N2E2_5552	0.72	+0.5
6,368,062	-		Pf6N2E2_5552	0.72	-1.3
6,368,062	-		Pf6N2E2_5552	0.72	+1.3
6,368,062	-		Pf6N2E2_5552	0.72	-1.8
6,368,062	-		Pf6N2E2_5552	0.72	+0.4
6,368,062	-		Pf6N2E2_5552	0.72	+1.2
6,368,062	-		Pf6N2E2_5552	0.72	+0.4
6,368,158	-		Pf6N2E2_5552	0.77	+0.9
6,368,158	-		Pf6N2E2_5552	0.77	-2.5
6,368,163	+		Pf6N2E2_5552	0.77	+1.0
6,368,163	+		Pf6N2E2_5552	0.77	-1.3
6,368,163	+		Pf6N2E2_5552	0.77	+0.5
6,368,163	+		Pf6N2E2_5552	0.77	+0.6
6,368,163	+		Pf6N2E2_5552	0.77	-1.7
6,368,164	-		Pf6N2E2_5552	0.77	+0.8
6,368,164	-		Pf6N2E2_5552	0.77	-1.3
6,368,164	-		Pf6N2E2_5552	0.77	+0.8
6,368,164	-		Pf6N2E2_5552	0.77	+1.1
6,368,164	-		Pf6N2E2_5552	0.77	+1.7
6,368,193	+		Pf6N2E2_5552	0.79	+0.7
6,368,194	-		Pf6N2E2_5552	0.79	+0.6
6,368,194	-		Pf6N2E2_5552	0.79	+0.4
6,368,194	-		Pf6N2E2_5552	0.79	-0.3
6,368,199	+		Pf6N2E2_5552	0.79	+1.1
6,368,199	+		Pf6N2E2_5552	0.79	+1.2
6,368,199	+		Pf6N2E2_5552	0.79	+0.7
6,368,199	+		Pf6N2E2_5552	0.79	-0.3
6,368,199	+		Pf6N2E2_5552	0.79	+1.1
6,368,199	+		Pf6N2E2_5552	0.79	+1.0
6,368,199	+		Pf6N2E2_5552	0.79	+0.2
6,368,199	+		Pf6N2E2_5552	0.79	-2.5
6,368,199	+		Pf6N2E2_5552	0.79	-0.4
6,368,199	+		Pf6N2E2_5552	0.79	+0.9
6,368,199	+		Pf6N2E2_5552	0.79	+1.0
6,368,200	-		Pf6N2E2_5552	0.79	+0.7
6,368,200	-		Pf6N2E2_5552	0.79	+0.8
6,368,200	-		Pf6N2E2_5552	0.79	+0.5
6,368,200	-		Pf6N2E2_5552	0.79	-0.7
6,368,200	-		Pf6N2E2_5552	0.79	-0.1
6,368,200	-		Pf6N2E2_5552	0.79	-0.1
6,368,200	-		Pf6N2E2_5552	0.79	+1.3
6,368,200	-		Pf6N2E2_5552	0.79	-0.9
6,368,200	-		Pf6N2E2_5552	0.79	+0.0
6,368,200	-		Pf6N2E2_5552	0.79	+0.5
6,368,200	-		Pf6N2E2_5552	0.79	-0.0
6,368,200	-		Pf6N2E2_5552	0.79	+0.3
6,368,200	-		Pf6N2E2_5552	0.79	+0.4
6,368,200	-		Pf6N2E2_5552	0.79	+1.5
6,368,200	-		Pf6N2E2_5552	0.79	+0.5
6,368,389	+		Pf6N2E2_5552	0.90	+0.7
6,368,546	+				+0.1
6,368,654	+				+1.0
6,368,654	+				+0.7
6,368,654	+				+0.5
6,368,654	+				+1.4
6,368,654	+				-0.8
6,368,654	+				+0.7
6,368,655	-				+1.0
6,368,655	-				-0.1
6,368,675	+				-0.5
6,368,675	+				+2.0
6,368,676	-				+1.0
6,368,676	-				+1.4
6,368,676	-				+0.6
6,368,676	-				+0.0
6,368,783	+				-0.1
6,368,924	-				+0.3
6,368,924	-				-0.3
6,369,011	+				-0.1
6,369,011	+				-0.2
6,369,011	+				+1.0
6,369,011	+				-0.8
6,369,011	+				+0.7
6,369,012	-				+0.6
6,369,012	-				+0.4
6,369,012	-				+0.3
6,369,012	-				-0.1
6,369,012	-				+0.9
6,369,012	-				+0.5
6,369,013	+				+0.6
6,369,013	+				-0.6
6,369,014	-				+0.2
6,369,203	-		Pf6N2E2_5553	0.14	-1.4
6,369,472	+		Pf6N2E2_5553	0.39	+0.7
6,369,472	+		Pf6N2E2_5553	0.39	-0.0
6,369,472	+		Pf6N2E2_5553	0.39	+0.2
6,369,472	+		Pf6N2E2_5553	0.39	-0.9
6,369,473	-		Pf6N2E2_5553	0.39	+0.3
6,369,473	-		Pf6N2E2_5553	0.39	+0.4
6,369,473	-		Pf6N2E2_5553	0.39	+2.3
6,369,473	-		Pf6N2E2_5553	0.39	-2.5
6,369,473	-		Pf6N2E2_5553	0.39	-0.6