Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2902

Experiment: RCH2_defined

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined
3,391,269	+		Pf6N2E2_2901	0.45	+0.9
3,391,270	-		Pf6N2E2_2901	0.45	+0.7
3,391,270	-		Pf6N2E2_2901	0.45	-0.6
3,391,585	+		Pf6N2E2_2901	0.80	-0.4
3,391,585	+		Pf6N2E2_2901	0.80	+0.0
3,391,605	+		Pf6N2E2_2901	0.82	-2.4
3,391,606	-		Pf6N2E2_2901	0.83	+0.9
3,391,712	+				+2.6
3,391,712	+				-1.0
3,391,854	+				+0.4
3,391,854	+				+0.5
3,391,854	+				+0.1
3,391,854	+				+1.9
3,391,854	+				-0.4
3,391,854	+				+0.4
3,391,854	+				+2.1
3,391,854	+				+0.3
3,391,855	-				+1.3
3,391,855	-				+0.1
3,391,855	-				+1.0
3,391,855	-				+0.5
3,391,855	-				-1.8
3,391,855	-				+1.0
3,391,855	-				-0.5
3,391,855	-				+1.2
3,391,855	-				-0.0
3,391,855	-				+1.4
3,391,855	-				-0.3
3,391,855	-				+0.3
3,391,855	-				-0.6
3,391,855	-				+1.7
3,391,855	-				-1.6
3,391,855	-				-0.5
3,391,855	-				+0.5
3,391,855	-				-0.4
3,391,856	+				-0.4
3,391,857	-				-0.7
3,391,857	-				+1.0
3,391,897	+				+0.2
3,391,897	+				+1.0
3,391,898	-				-1.8
3,391,898	-				-1.6
3,391,898	-				-2.0
3,391,898	-				+0.5
3,391,898	-				+1.3
3,392,024	+				+0.9
3,392,024	+				+1.0
3,392,024	+				+1.4
3,392,025	-				-1.0
3,392,025	-				+0.7
3,392,205	-				-2.0
3,392,277	+		Pf6N2E2_2902	0.13	+1.7
3,392,277	+		Pf6N2E2_2902	0.13	-0.0
3,392,277	+		Pf6N2E2_2902	0.13	+1.1
3,392,278	-		Pf6N2E2_2902	0.13	+0.1
3,392,278	-		Pf6N2E2_2902	0.13	-2.3
3,392,278	-		Pf6N2E2_2902	0.13	+0.4
3,392,320	-		Pf6N2E2_2902	0.14	-1.2
3,392,375	-		Pf6N2E2_2902	0.17	-1.6
3,392,441	-		Pf6N2E2_2902	0.19	+0.9
3,392,450	+		Pf6N2E2_2902	0.20	+1.0
3,392,451	-		Pf6N2E2_2902	0.20	-0.9
3,392,555	+		Pf6N2E2_2902	0.24	+0.6
3,392,555	+		Pf6N2E2_2902	0.24	+0.1
3,392,556	-		Pf6N2E2_2902	0.24	-0.0
3,392,556	-		Pf6N2E2_2902	0.24	+0.5
3,392,556	-		Pf6N2E2_2902	0.24	-0.5
3,392,615	+		Pf6N2E2_2902	0.26	+1.0
3,392,649	-		Pf6N2E2_2902	0.28	+0.1
3,392,649	-		Pf6N2E2_2902	0.28	-0.3
3,392,649	-		Pf6N2E2_2902	0.28	-1.0
3,392,649	-		Pf6N2E2_2902	0.28	+1.0
3,392,795	+		Pf6N2E2_2902	0.33	+0.1
3,392,921	+		Pf6N2E2_2902	0.38	+0.7
3,392,922	-		Pf6N2E2_2902	0.38	+0.2
3,392,922	-		Pf6N2E2_2902	0.38	+0.6
3,392,922	-		Pf6N2E2_2902	0.38	+1.4
3,392,960	+		Pf6N2E2_2902	0.40	-0.6
3,392,960	+		Pf6N2E2_2902	0.40	+1.4
3,392,961	-		Pf6N2E2_2902	0.40	+0.6
3,392,961	-		Pf6N2E2_2902	0.40	+0.7
3,392,961	-		Pf6N2E2_2902	0.40	+0.3
3,392,997	-		Pf6N2E2_2902	0.41	+0.8
3,393,043	-		Pf6N2E2_2902	0.43	-0.6
3,393,059	+		Pf6N2E2_2902	0.44	+1.1
3,393,059	+		Pf6N2E2_2902	0.44	-0.6
3,393,059	+		Pf6N2E2_2902	0.44	+0.4
3,393,059	+		Pf6N2E2_2902	0.44	+0.1
3,393,059	+		Pf6N2E2_2902	0.44	-0.2
3,393,060	-		Pf6N2E2_2902	0.44	-0.2
3,393,060	-		Pf6N2E2_2902	0.44	-0.9
3,393,206	+		Pf6N2E2_2902	0.50	-0.3
3,393,206	+		Pf6N2E2_2902	0.50	+0.9
3,393,206	+		Pf6N2E2_2902	0.50	-0.3
3,393,251	+		Pf6N2E2_2902	0.51	+0.3
3,393,251	+		Pf6N2E2_2902	0.51	-3.3
3,393,251	+		Pf6N2E2_2902	0.51	-0.0
3,393,251	+		Pf6N2E2_2902	0.51	+0.5
3,393,251	+		Pf6N2E2_2902	0.51	-0.2
3,393,251	+		Pf6N2E2_2902	0.51	-0.3
3,393,251	+		Pf6N2E2_2902	0.51	+0.4
3,393,251	+		Pf6N2E2_2902	0.51	-2.3
3,393,251	+		Pf6N2E2_2902	0.51	+0.5
3,393,251	+		Pf6N2E2_2902	0.51	+2.3
3,393,252	-		Pf6N2E2_2902	0.51	+0.8
3,393,252	-		Pf6N2E2_2902	0.51	+0.1
3,393,329	+		Pf6N2E2_2902	0.54	+0.9
3,393,330	-		Pf6N2E2_2902	0.54	+0.7
3,393,330	-		Pf6N2E2_2902	0.54	+0.4
3,393,330	-		Pf6N2E2_2902	0.54	+0.2
3,393,485	+		Pf6N2E2_2902	0.61	+0.4
3,393,485	+		Pf6N2E2_2902	0.61	+2.0
3,393,485	+		Pf6N2E2_2902	0.61	+0.9
3,393,486	-		Pf6N2E2_2902	0.61	-0.4
3,393,486	-		Pf6N2E2_2902	0.61	+0.9
3,393,554	+		Pf6N2E2_2902	0.63	-0.0
3,393,554	+		Pf6N2E2_2902	0.63	+0.8
3,393,554	+		Pf6N2E2_2902	0.63	-0.6
3,393,554	+		Pf6N2E2_2902	0.63	+0.8
3,393,555	-		Pf6N2E2_2902	0.63	-0.3
3,393,677	+		Pf6N2E2_2902	0.68	+0.8
3,393,678	-		Pf6N2E2_2902	0.68	-1.0
3,393,678	-		Pf6N2E2_2902	0.68	+0.7
3,393,695	+		Pf6N2E2_2902	0.69	+0.2
3,393,695	+		Pf6N2E2_2902	0.69	+0.5
3,393,696	-		Pf6N2E2_2902	0.69	+0.6
3,393,784	+		Pf6N2E2_2902	0.72	-1.8
3,393,785	-		Pf6N2E2_2902	0.73	+0.6
3,393,831	-		Pf6N2E2_2902	0.74	-0.6
3,393,887	+		Pf6N2E2_2902	0.77	+0.8
3,393,887	+		Pf6N2E2_2902	0.77	+1.1
3,393,888	-		Pf6N2E2_2902	0.77	+1.4
3,393,888	-		Pf6N2E2_2902	0.77	+1.4
3,393,896	+		Pf6N2E2_2902	0.77	+1.1
3,393,897	-		Pf6N2E2_2902	0.77	+0.8
3,394,043	+		Pf6N2E2_2902	0.83	-0.0
3,394,043	+		Pf6N2E2_2902	0.83	+0.7
3,394,043	+		Pf6N2E2_2902	0.83	-1.3
3,394,043	+		Pf6N2E2_2902	0.83	-0.2
3,394,044	-		Pf6N2E2_2902	0.83	-0.6
3,394,044	-		Pf6N2E2_2902	0.83	-0.6
3,394,044	-		Pf6N2E2_2902	0.83	-1.9
3,394,044	-		Pf6N2E2_2902	0.83	+0.8
3,394,064	+		Pf6N2E2_2902	0.84	+0.4
3,394,071	-		Pf6N2E2_2902	0.84	+1.7
3,394,142	+		Pf6N2E2_2902	0.87	+1.0
3,394,289	+				+0.1
3,394,289	+				+0.9
3,394,290	-				-0.0
3,394,290	-				-0.2
3,394,328	+				+0.2
3,394,328	+				-0.2
3,394,329	-				+1.3
3,394,329	-				-0.6
3,394,329	-				+0.6
3,394,349	+				+0.5
3,394,349	+				+0.1
3,394,350	-				-0.6
3,394,350	-				+0.8
3,394,350	-				+0.4
3,394,445	-				-0.0
3,394,472	-				+1.3
3,394,623	+				-0.6
3,394,624	-				+1.4
3,394,624	-				-1.0
3,394,789	+		Pf6N2E2_2903	0.29	+0.2
3,394,789	+		Pf6N2E2_2903	0.29	+0.1
3,394,790	-		Pf6N2E2_2903	0.29	-0.3
3,394,790	-		Pf6N2E2_2903	0.29	+0.7
3,394,790	-		Pf6N2E2_2903	0.29	-0.4
3,394,790	-		Pf6N2E2_2903	0.29	-0.8
3,395,166	+				+0.7
3,395,167	-				-1.4
3,395,189	-				-0.0
3,395,189	-				-0.0
3,395,301	+		Pf6N2E2_2904	0.11	-0.4