Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16090

Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with MOPS
3,654,042	+		PFLU_RS16080	0.73	-3.0
3,654,042	+		PFLU_RS16080	0.73	-3.0
3,654,043	-		PFLU_RS16080	0.73	-2.6
3,654,134	+		PFLU_RS16080	0.84	-1.5
3,654,135	-		PFLU_RS16080	0.84	-1.4
3,654,135	-		PFLU_RS16080	0.84	-2.8
3,654,255	+				-3.2
3,654,255	+				-1.5
3,654,256	-				-3.0
3,654,256	-				-2.2
3,654,256	-				-3.3
3,654,256	-				-2.3
3,654,271	+				-1.7
3,654,337	-				-0.1
3,654,368	+				-2.6
3,654,434	+				-1.9
3,654,434	+				-0.5
3,654,435	-				-0.1
3,654,447	+				-1.0
3,654,817	+		PFLU_RS16085	0.69	+1.5
3,654,955	+				-0.2
3,654,955	+				+0.6
3,654,955	+				-0.1
3,654,955	+				+0.9
3,654,955	+				+0.6
3,654,956	-				+0.9
3,654,992	-				+7.6
3,655,057	+				+6.2
3,655,057	+				+6.2
3,655,057	+				+6.1
3,655,114	+		PFLU_RS16090	0.11	+6.4
3,655,114	+		PFLU_RS16090	0.11	+7.1
3,655,114	+		PFLU_RS16090	0.11	+6.2
3,655,114	+		PFLU_RS16090	0.11	+5.7
3,655,114	+		PFLU_RS16090	0.11	+6.9
3,655,114	+		PFLU_RS16090	0.11	+6.2
3,655,114	+		PFLU_RS16090	0.11	+6.7
3,655,114	+		PFLU_RS16090	0.11	+6.1
3,655,115	-		PFLU_RS16090	0.11	+6.7
3,655,115	-		PFLU_RS16090	0.11	+6.9
3,655,115	-		PFLU_RS16090	0.11	+7.2
3,655,115	-		PFLU_RS16090	0.11	+6.9
3,655,115	-		PFLU_RS16090	0.11	+6.8
3,655,195	+		PFLU_RS16090	0.17	+6.3
3,655,195	+		PFLU_RS16090	0.17	+5.9
3,655,195	+		PFLU_RS16090	0.17	+6.3
3,655,195	+		PFLU_RS16090	0.17	+6.9
3,655,195	+		PFLU_RS16090	0.17	+6.3
3,655,196	-		PFLU_RS16090	0.17	+6.9
3,655,196	-		PFLU_RS16090	0.17	+6.7
3,655,196	-		PFLU_RS16090	0.17	+6.5
3,655,244	-		PFLU_RS16090	0.21	+7.1
3,655,249	+		PFLU_RS16090	0.21	+6.4
3,655,249	+		PFLU_RS16090	0.21	+5.8
3,655,249	+		PFLU_RS16090	0.21	+5.6
3,655,249	+		PFLU_RS16090	0.21	+5.8
3,655,249	+		PFLU_RS16090	0.21	+6.3
3,655,249	+		PFLU_RS16090	0.21	+6.2
3,655,249	+		PFLU_RS16090	0.21	+6.8
3,655,249	+		PFLU_RS16090	0.21	+6.8
3,655,249	+		PFLU_RS16090	0.21	+6.2
3,655,249	+		PFLU_RS16090	0.21	+6.3
3,655,249	+		PFLU_RS16090	0.21	+6.1
3,655,249	+		PFLU_RS16090	0.21	+6.6
3,655,249	+		PFLU_RS16090	0.21	+6.2
3,655,249	+		PFLU_RS16090	0.21	+5.4
3,655,249	+		PFLU_RS16090	0.21	+6.9
3,655,249	+		PFLU_RS16090	0.21	+6.4
3,655,249	+		PFLU_RS16090	0.21	+6.5
3,655,249	+		PFLU_RS16090	0.21	+6.3
3,655,249	+		PFLU_RS16090	0.21	+6.4
3,655,249	+		PFLU_RS16090	0.21	+6.5
3,655,250	-		PFLU_RS16090	0.21	+6.7
3,655,250	-		PFLU_RS16090	0.21	+7.2
3,655,250	-		PFLU_RS16090	0.21	+7.0
3,655,250	-		PFLU_RS16090	0.21	+7.5
3,655,250	-		PFLU_RS16090	0.21	+7.1
3,655,250	-		PFLU_RS16090	0.21	+6.8
3,655,250	-		PFLU_RS16090	0.21	+7.2
3,655,250	-		PFLU_RS16090	0.21	+7.1
3,655,250	-		PFLU_RS16090	0.21	+6.8
3,655,250	-		PFLU_RS16090	0.21	+7.8
3,655,250	-		PFLU_RS16090	0.21	+7.5
3,655,250	-		PFLU_RS16090	0.21	+8.1
3,655,250	-		PFLU_RS16090	0.21	+6.6
3,655,250	-		PFLU_RS16090	0.21	+7.3
3,655,250	-		PFLU_RS16090	0.21	+6.5
3,655,250	-		PFLU_RS16090	0.21	+6.0
3,655,250	-		PFLU_RS16090	0.21	+8.0
3,655,250	-		PFLU_RS16090	0.21	+7.7
3,655,337	+		PFLU_RS16090	0.28	+6.7
3,655,337	+		PFLU_RS16090	0.28	+7.4
3,655,337	+		PFLU_RS16090	0.28	+6.1
3,655,338	-		PFLU_RS16090	0.28	+7.9
3,655,339	+		PFLU_RS16090	0.28	+6.2
3,655,340	-		PFLU_RS16090	0.28	+6.7
3,655,340	-		PFLU_RS16090	0.28	+6.8
3,655,372	+		PFLU_RS16090	0.30	+6.0
3,655,372	+		PFLU_RS16090	0.30	+6.1
3,655,372	+		PFLU_RS16090	0.30	+6.6
3,655,373	-		PFLU_RS16090	0.30	+6.9
3,655,373	-		PFLU_RS16090	0.30	+6.8
3,655,373	-		PFLU_RS16090	0.30	+7.3
3,655,373	-		PFLU_RS16090	0.30	+6.7
3,655,373	-		PFLU_RS16090	0.30	+6.9
3,655,553	-		PFLU_RS16090	0.44	+6.6
3,655,609	+		PFLU_RS16090	0.48	+6.6
3,655,609	+		PFLU_RS16090	0.48	+6.3
3,655,624	+		PFLU_RS16090	0.49	+7.0
3,655,625	-		PFLU_RS16090	0.49	+5.8
3,655,625	-		PFLU_RS16090	0.49	+6.6
3,655,625	-		PFLU_RS16090	0.49	+6.6
3,655,719	-		PFLU_RS16090	0.56	+6.5
3,655,730	-		PFLU_RS16090	0.57	+6.7
3,655,730	-		PFLU_RS16090	0.57	+6.9
3,655,730	-		PFLU_RS16090	0.57	+6.6
3,655,730	-		PFLU_RS16090	0.57	+6.9
3,655,906	+		PFLU_RS16090	0.70	+6.0
3,655,907	-		PFLU_RS16090	0.71	+6.7
3,656,039	-		PFLU_RS16090	0.80	+6.2
3,656,110	+		PFLU_RS16090	0.86	+6.8
3,656,110	+		PFLU_RS16090	0.86	+6.8
3,656,110	+		PFLU_RS16090	0.86	+6.9
3,656,110	+		PFLU_RS16090	0.86	+6.8
3,656,111	-		PFLU_RS16090	0.86	+6.2
3,656,111	-		PFLU_RS16090	0.86	+6.1
3,656,111	-		PFLU_RS16090	0.86	+6.9
3,656,111	-		PFLU_RS16090	0.86	+7.0
3,656,125	+		PFLU_RS16090	0.87	+6.9
3,656,126	-		PFLU_RS16090	0.87	+7.0
3,656,126	-		PFLU_RS16090	0.87	+6.2
3,656,126	-		PFLU_RS16090	0.87	+5.9
3,656,128	+		PFLU_RS16090	0.87	+6.4
3,656,129	-		PFLU_RS16090	0.87	+6.9
3,656,129	-		PFLU_RS16090	0.87	+7.0
3,656,129	-		PFLU_RS16090	0.87	+6.5
3,656,292	+				+4.9
3,656,292	+				+4.0
3,656,292	+				+5.4
3,656,292	+				+5.3
3,656,293	-				+6.4
3,656,293	-				+3.8
3,656,293	-				+3.1
3,656,293	-				+2.6
3,656,293	-				+6.3
3,656,293	-				+5.5
3,656,293	-				+5.4
3,656,293	-				+0.2
3,656,293	-				+2.2
3,656,293	-				+6.5
3,656,293	-				+5.3
3,656,293	-				+6.1
3,656,293	-				+1.6
3,656,293	-				+6.0
3,656,293	-				+2.3
3,656,293	-				+6.0
3,656,293	-				+6.0
3,656,293	-				+3.3
3,656,382	+				+4.0
3,656,383	-				-0.9
3,656,582	+				+0.1
3,656,638	+				+0.2
3,656,653	+				+1.4
3,656,713	-				+0.1
3,656,897	+		PFLU_RS16095	0.24	-0.9
3,656,897	+		PFLU_RS16095	0.24	-0.4
3,656,898	-		PFLU_RS16095	0.24	-0.4
3,656,898	-		PFLU_RS16095	0.24	-0.0
3,657,023	+		PFLU_RS16095	0.34	-0.5
3,657,023	+		PFLU_RS16095	0.34	+1.1
3,657,023	+		PFLU_RS16095	0.34	-1.4
3,657,023	+		PFLU_RS16095	0.34	-0.2
3,657,023	+		PFLU_RS16095	0.34	-3.6
3,657,023	+		PFLU_RS16095	0.34	-3.3
3,657,023	+		PFLU_RS16095	0.34	-1.9
3,657,023	+		PFLU_RS16095	0.34	-1.3
3,657,024	-		PFLU_RS16095	0.35	+0.8
3,657,024	-		PFLU_RS16095	0.35	+0.3
3,657,024	-		PFLU_RS16095	0.35	-0.5
3,657,151	-		PFLU_RS16095	0.45	-0.8
3,657,272	+		PFLU_RS16095	0.55	+0.8
3,657,272	+		PFLU_RS16095	0.55	-0.7
3,657,272	+		PFLU_RS16095	0.55	+0.7
3,657,273	-		PFLU_RS16095	0.55	-0.7
3,657,273	-		PFLU_RS16095	0.55	-0.2
3,657,296	+		PFLU_RS16095	0.57	+0.7
3,657,296	+		PFLU_RS16095	0.57	-0.1
3,657,296	+		PFLU_RS16095	0.57	+0.0
3,657,296	+		PFLU_RS16095	0.57	+0.9
3,657,296	+		PFLU_RS16095	0.57	+1.0
3,657,296	+		PFLU_RS16095	0.57	-0.3
3,657,296	+		PFLU_RS16095	0.57	-0.3
3,657,296	+		PFLU_RS16095	0.57	+0.3
3,657,296	+		PFLU_RS16095	0.57	-0.6
3,657,296	+		PFLU_RS16095	0.57	+0.1
3,657,296	+		PFLU_RS16095	0.57	-0.3
3,657,296	+		PFLU_RS16095	0.57	-1.4
3,657,296	+		PFLU_RS16095	0.57	+0.0
3,657,296	+		PFLU_RS16095	0.57	-1.1
3,657,296	+		PFLU_RS16095	0.57	-0.3
3,657,296	+		PFLU_RS16095	0.57	+0.3
3,657,297	-		PFLU_RS16095	0.57	-1.1
3,657,297	-		PFLU_RS16095	0.57	-0.4
3,657,297	-		PFLU_RS16095	0.57	-0.9
3,657,297	-		PFLU_RS16095	0.57	+0.7
3,657,297	-		PFLU_RS16095	0.57	+1.1
3,657,297	-		PFLU_RS16095	0.57	-0.1
3,657,297	-		PFLU_RS16095	0.57	+1.3
3,657,297	-		PFLU_RS16095	0.57	+0.7
3,657,297	-		PFLU_RS16095	0.57	+0.1
3,657,297	-		PFLU_RS16095	0.57	-0.1
3,657,297	-		PFLU_RS16095	0.57	-0.4
3,657,297	-		PFLU_RS16095	0.57	-0.3
3,657,297	-		PFLU_RS16095	0.57	-0.2
3,657,297	-		PFLU_RS16095	0.57	-0.7
3,657,297	-		PFLU_RS16095	0.57	-0.1
3,657,297	-		PFLU_RS16095	0.57	+0.7
3,657,297	-		PFLU_RS16095	0.57	-1.1
3,657,297	-		PFLU_RS16095	0.57	+0.8
3,657,297	-		PFLU_RS16095	0.57	-1.2
3,657,297	-		PFLU_RS16095	0.57	+1.2
3,657,297	-		PFLU_RS16095	0.57	+0.6
3,657,297	-		PFLU_RS16095	0.57	+0.3