Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4006

Experiment: RCH2 defined with Cobalt chloride 0.04 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2 defined with Cobalt chloride 0.04 mM
4,675,154	-		Pf6N2E2_4004	0.14	-0.6
4,675,159	+		Pf6N2E2_4004	0.14	+1.1
4,675,160	-		Pf6N2E2_4004	0.14	+0.2
4,675,160	-		Pf6N2E2_4004	0.14	-1.5
4,675,243	+		Pf6N2E2_4004	0.26	+0.9
4,675,244	-		Pf6N2E2_4004	0.26	-1.1
4,675,465	+		Pf6N2E2_4004	0.57	+1.0
4,675,465	+		Pf6N2E2_4004	0.57	+0.3
4,675,465	+		Pf6N2E2_4004	0.57	+0.5
4,675,466	-		Pf6N2E2_4004	0.57	-0.6
4,675,522	+		Pf6N2E2_4004	0.65	+0.9
4,675,522	+		Pf6N2E2_4004	0.65	-2.5
4,675,541	+		Pf6N2E2_4004	0.67	+1.9
4,675,541	+		Pf6N2E2_4004	0.67	-1.1
4,675,542	-		Pf6N2E2_4004	0.68	-1.6
4,675,615	+		Pf6N2E2_4004	0.78	+1.7
4,675,615	+		Pf6N2E2_4004	0.78	+1.4
4,675,615	+		Pf6N2E2_4004	0.78	+0.8
4,675,620	+		Pf6N2E2_4004	0.78	+1.3
4,675,621	-		Pf6N2E2_4004	0.78	+0.8
4,675,672	+		Pf6N2E2_4004	0.86	-0.8
4,675,673	-		Pf6N2E2_4004	0.86	-1.0
4,675,788	+				+0.7
4,675,788	+				+0.3
4,675,810	+		Pf6N2E2_4005	0.16	-0.8
4,675,810	+		Pf6N2E2_4005	0.16	+2.3
4,675,874	+		Pf6N2E2_4005	0.38	+0.4
4,675,874	+		Pf6N2E2_4005	0.38	+0.2
4,675,874	+		Pf6N2E2_4005	0.38	+0.6
4,675,874	+		Pf6N2E2_4005	0.38	+0.4
4,675,874	+		Pf6N2E2_4005	0.38	+0.2
4,675,875	-		Pf6N2E2_4005	0.38	+1.2
4,675,875	-		Pf6N2E2_4005	0.38	+3.1
4,675,875	-		Pf6N2E2_4005	0.38	+1.2
4,675,875	-		Pf6N2E2_4005	0.38	-0.3
4,675,875	-		Pf6N2E2_4005	0.38	+0.6
4,676,057	-				-0.3
4,676,057	-				-0.0
4,676,091	-				-3.1
4,676,107	-				-1.8
4,676,107	-				-2.0
4,676,118	+				+0.7
4,676,118	+				-1.4
4,676,118	+				+0.2
4,676,118	+				+1.6
4,676,119	+				+0.6
4,676,119	-				-0.6
4,676,119	-				-0.6
4,676,229	+		Pf6N2E2_4006	0.12	+2.1
4,676,229	+		Pf6N2E2_4006	0.12	-2.0
4,676,229	+		Pf6N2E2_4006	0.12	+0.6
4,676,263	-		Pf6N2E2_4006	0.16	-0.9
4,676,301	+		Pf6N2E2_4006	0.19	-0.6
4,676,301	+		Pf6N2E2_4006	0.19	-0.4
4,676,301	+		Pf6N2E2_4006	0.19	+1.0
4,676,301	+		Pf6N2E2_4006	0.19	-1.8
4,676,302	-		Pf6N2E2_4006	0.19	-3.3
4,676,302	-		Pf6N2E2_4006	0.19	+0.7
4,676,316	+		Pf6N2E2_4006	0.21	-0.7
4,676,317	-		Pf6N2E2_4006	0.21	-1.8
4,676,509	+		Pf6N2E2_4006	0.40	+0.4
4,676,510	-		Pf6N2E2_4006	0.40	-0.8
4,676,510	-		Pf6N2E2_4006	0.40	-1.3
4,676,571	+		Pf6N2E2_4006	0.46	-0.1
4,676,572	-		Pf6N2E2_4006	0.46	-1.6
4,676,616	+		Pf6N2E2_4006	0.50	-0.0
4,676,766	+		Pf6N2E2_4006	0.65	+0.2
4,676,766	+		Pf6N2E2_4006	0.65	-0.0
4,676,766	+		Pf6N2E2_4006	0.65	+2.7
4,676,767	-		Pf6N2E2_4006	0.65	-3.0
4,676,767	-		Pf6N2E2_4006	0.65	-1.1
4,676,767	-		Pf6N2E2_4006	0.65	-2.0
4,676,767	-		Pf6N2E2_4006	0.65	-0.1
4,676,773	+		Pf6N2E2_4006	0.66	-0.7
4,676,773	+		Pf6N2E2_4006	0.66	+0.2
4,676,773	+		Pf6N2E2_4006	0.66	+0.1
4,676,773	+		Pf6N2E2_4006	0.66	-0.4
4,676,773	+		Pf6N2E2_4006	0.66	+0.3
4,676,774	-		Pf6N2E2_4006	0.66	-1.8
4,676,991	+		Pf6N2E2_4006	0.87	+1.3
4,676,991	+		Pf6N2E2_4006	0.87	+0.6
4,676,991	+		Pf6N2E2_4006	0.87	+0.7
4,676,991	+		Pf6N2E2_4006	0.87	+0.6
4,676,991	+		Pf6N2E2_4006	0.87	+0.4
4,676,991	+		Pf6N2E2_4006	0.87	+0.2
4,676,992	-		Pf6N2E2_4006	0.87	-2.3
4,676,992	-		Pf6N2E2_4006	0.87	-1.2
4,676,992	-		Pf6N2E2_4006	0.87	-2.3
4,676,992	-		Pf6N2E2_4006	0.87	-1.6
4,676,992	-		Pf6N2E2_4006	0.87	-0.6
4,677,021	+				-0.0
4,677,021	+				+1.7
4,677,022	-				-1.9
4,677,042	+				+0.3
4,677,099	+				+0.6
4,677,148	+				+0.6
4,677,149	-				-3.1
4,677,177	-				+0.0
4,677,177	-				-1.3
4,677,205	+				-1.1
4,677,206	-				-1.3
4,677,206	-				+1.7
4,677,206	-				-2.7
4,677,268	+				+2.2
4,677,268	+				+1.4
4,677,268	+				+0.5
4,677,269	-				-0.6
4,677,359	+		Pf6N2E2_4007	0.56	+0.5
4,677,359	+		Pf6N2E2_4007	0.56	+0.4
4,677,359	+		Pf6N2E2_4007	0.56	+0.2
4,677,360	-		Pf6N2E2_4007	0.56	-2.3
4,677,360	-		Pf6N2E2_4007	0.56	-1.3
4,677,360	-		Pf6N2E2_4007	0.56	-2.0
4,677,360	-		Pf6N2E2_4007	0.56	+0.4
4,677,421	+				+1.6
4,677,421	+				-0.6
4,677,421	+				+0.7
4,677,422	-				+0.3
4,677,422	-				-0.7
4,677,422	-				+0.2
4,677,422	-				+2.6
4,677,422	-				-1.3
4,677,425	+				+0.2
4,677,425	+				-1.1
4,677,425	+				-1.2
4,677,426	-				+0.3
4,677,426	-				-1.1
4,677,426	-				-0.2
4,677,426	-				-1.3
4,677,501	+				-0.6
4,677,501	+				+0.5
4,677,501	+				+1.7
4,677,501	+				+0.3
4,677,502	-				-0.9
4,677,502	-				-2.5
4,677,502	-				+0.3
4,677,502	-				-2.2
4,677,502	-				+0.5
4,677,504	+				+0.3
4,677,504	+				+0.3
4,677,504	+				-1.6
4,677,504	+				-0.7
4,677,504	+				-0.1
4,677,504	+				-1.0
4,677,504	+				-2.9
4,677,504	+				-0.6
4,677,504	+				-1.4
4,677,504	+				+0.3
4,677,504	+				+0.6
4,677,505	-				-0.1
4,677,505	-				+0.2
4,677,505	-				-0.1
4,677,505	-				+2.0
4,677,505	-				-1.1
4,677,505	-				+0.2
4,677,505	-				-2.1
4,677,505	-				-3.0
4,677,505	-				-2.5
4,677,505	-				-0.1
4,677,505	-				-2.3
4,677,505	-				-0.8
4,677,505	-				-1.3
4,677,505	-				-2.3
4,677,505	-				-1.7
4,677,505	-				-0.8
4,677,505	-				-1.0
4,677,505	-				-1.3
4,677,505	-				-3.0
4,677,508	+				+1.2
4,677,508	+				+0.2
4,677,509	-				+0.7
4,677,509	-				-2.9
4,677,649	+				+1.1
4,677,649	+				+1.2
4,677,649	+				-0.7
4,677,649	+				+1.1
4,677,649	+				+0.9
4,677,649	+				+0.6
4,677,650	-				-0.2
4,677,650	-				+0.7
4,677,650	-				-1.5
4,677,660	+				-0.6
4,677,660	+				+0.4
4,677,660	+				-0.3
4,677,660	+				+1.1
4,677,661	-				-1.1
4,677,672	+				+0.2
4,677,672	+				+0.5
4,677,673	-				-1.3
4,677,739	+				-0.3
4,677,740	-				-0.5
4,677,740	-				+0.2
4,677,751	+				+1.2
4,677,777	-				-1.1
4,677,791	+				-0.6
4,677,854	+				-3.1
4,677,854	+				+0.2
4,677,854	+				+0.6
4,677,854	+				-0.8
4,677,854	+				+2.6
4,677,854	+				+1.3
4,677,854	+				+1.5
4,677,855	-				+0.3
4,677,855	-				+0.7
4,677,855	-				+1.7
4,677,855	-				-0.3
4,677,855	-				-0.7
4,677,855	-				+0.0
4,677,855	-				-1.6
4,677,855	-				+1.5
4,677,855	-				+0.2
4,677,858	+				-0.3
4,677,858	+				-1.1
4,677,858	+				+0.9
4,677,858	+				-0.7
4,677,859	-				-0.7
4,677,859	-				-0.6
4,677,859	-				-0.9
4,677,859	-				-2.6
4,677,859	-				+0.7
4,677,859	-				-0.1
4,677,859	-				-2.3
4,677,859	-				-1.6
4,677,859	-				-2.3
4,677,911	+				+1.5
4,677,912	-				-1.1
4,677,912	-				-1.7
4,677,915	+				+0.7
4,677,915	+				+0.3
4,677,915	+				-0.2
4,677,915	+				-0.3
4,677,915	+				-1.8
4,677,915	+				-0.3
4,677,915	+				-2.0
4,677,915	+				+0.4
4,677,915	+				-0.6
4,677,915	+				-0.3
4,677,915	+				+1.5
4,677,915	+				-1.7
4,677,916	-				-0.8
4,677,916	-				+0.7
4,677,916	-				-2.2
4,677,916	-				-1.4
4,677,916	-				-1.7
4,677,916	-				-0.3
4,677,916	-				-0.7
4,677,916	-				+0.2
4,677,916	-				-1.1
4,677,916	-				+0.5
4,677,916	-				-1.3
4,677,916	-				+0.7
4,677,916	-				-1.5
4,677,916	-				-1.6
4,677,916	-				-0.6
4,677,916	-				-0.3
4,677,916	-				+0.3
4,677,916	-				-0.3
4,677,916	-				-0.6
4,677,916	-				-0.3
4,677,920	+				+0.1
4,677,920	+				-0.9
4,677,920	+				+0.9
4,677,921	-				-2.1
4,677,921	-				-0.4
4,677,921	-				+0.7
4,677,921	-				-0.3
4,677,921	-				-2.3
4,677,921	-				-2.7
4,677,921	-				-0.5
4,677,921	-				-0.3
4,678,023	+		Pf6N2E2_4008	0.27	+3.2
4,678,023	+		Pf6N2E2_4008	0.27	-0.6
4,678,023	+		Pf6N2E2_4008	0.27	+2.2
4,678,026	+		Pf6N2E2_4008	0.27	+0.2
4,678,026	+		Pf6N2E2_4008	0.27	-0.8
4,678,026	+		Pf6N2E2_4008	0.27	-0.1
4,678,027	-		Pf6N2E2_4008	0.28	-0.8
4,678,027	-		Pf6N2E2_4008	0.28	-1.6
4,678,027	-		Pf6N2E2_4008	0.28	-0.1
4,678,027	-		Pf6N2E2_4008	0.28	+0.6
4,678,097	-		Pf6N2E2_4008	0.46	-1.6
4,678,097	-		Pf6N2E2_4008	0.46	+0.8
4,678,097	-		Pf6N2E2_4008	0.46	-0.6
4,678,097	-		Pf6N2E2_4008	0.46	-1.9