Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1088

Experiment: RCH2 defined with Cobalt chloride 0.04 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2 defined with Cobalt chloride 0.04 mM
1,270,691	+		Pf6N2E2_1087	0.32	-2.4
1,270,692	-		Pf6N2E2_1087	0.32	-0.1
1,270,692	-		Pf6N2E2_1087	0.32	-1.9
1,270,775	-		Pf6N2E2_1087	0.40	+0.6
1,270,799	+		Pf6N2E2_1087	0.42	-2.1
1,270,799	+		Pf6N2E2_1087	0.42	+1.2
1,270,800	-		Pf6N2E2_1087	0.42	+0.3
1,270,800	-		Pf6N2E2_1087	0.42	-2.1
1,270,807	+		Pf6N2E2_1087	0.43	-1.1
1,270,807	+		Pf6N2E2_1087	0.43	-1.4
1,270,807	+		Pf6N2E2_1087	0.43	-0.6
1,270,807	+		Pf6N2E2_1087	0.43	-0.3
1,270,807	+		Pf6N2E2_1087	0.43	+0.3
1,270,808	-		Pf6N2E2_1087	0.43	-1.0
1,270,808	-		Pf6N2E2_1087	0.43	-1.0
1,270,938	-		Pf6N2E2_1087	0.56	+0.3
1,271,001	+		Pf6N2E2_1087	0.62	-2.5
1,271,001	+		Pf6N2E2_1087	0.62	+1.6
1,271,002	-		Pf6N2E2_1087	0.63	-1.9
1,271,002	-		Pf6N2E2_1087	0.63	-0.5
1,271,002	-		Pf6N2E2_1087	0.63	-0.1
1,271,008	+		Pf6N2E2_1087	0.63	-0.5
1,271,036	+		Pf6N2E2_1087	0.66	-0.5
1,271,037	-		Pf6N2E2_1087	0.66	-0.5
1,271,073	-		Pf6N2E2_1087	0.70	+1.5
1,271,073	-		Pf6N2E2_1087	0.70	-3.6
1,271,095	+		Pf6N2E2_1087	0.72	+0.5
1,271,099	-		Pf6N2E2_1087	0.72	-1.5
1,271,099	-		Pf6N2E2_1087	0.72	+0.2
1,271,099	-		Pf6N2E2_1087	0.72	-1.1
1,271,346	-				+0.3
1,271,489	+				-1.1
1,271,499	+				+0.5
1,271,499	+				+0.3
1,271,500	-				-1.1
1,271,500	-				-1.2
1,271,500	-				-1.2
1,271,626	+				-1.1
1,271,627	-				+1.8
1,271,627	-				+1.2
1,271,736	-				+0.7
1,271,762	+				-0.8
1,271,762	+				+1.5
1,271,762	+				+1.7
1,271,763	-				-0.5
1,271,763	-				+0.3
1,271,763	-				-0.8
1,271,873	+				-1.5
1,271,921	+				+0.5
1,271,921	+				-0.3
1,271,937	+				+0.3
1,271,938	-				+0.2
1,272,026	+		Pf6N2E2_1088	0.10	+0.5
1,272,026	+		Pf6N2E2_1088	0.10	+1.8
1,272,065	+		Pf6N2E2_1088	0.11	+1.0
1,272,065	+		Pf6N2E2_1088	0.11	-1.9
1,272,065	+		Pf6N2E2_1088	0.11	+1.1
1,272,065	+		Pf6N2E2_1088	0.11	+0.9
1,272,066	-		Pf6N2E2_1088	0.11	-0.4
1,272,094	+		Pf6N2E2_1088	0.12	+0.5
1,272,215	-		Pf6N2E2_1088	0.14	-0.8
1,272,225	+		Pf6N2E2_1088	0.14	-0.2
1,272,226	-		Pf6N2E2_1088	0.14	+1.0
1,272,226	-		Pf6N2E2_1088	0.14	-0.5
1,272,342	-		Pf6N2E2_1088	0.17	-0.5
1,272,461	+		Pf6N2E2_1088	0.19	-2.5
1,272,461	+		Pf6N2E2_1088	0.19	-1.4
1,272,461	+		Pf6N2E2_1088	0.19	-0.5
1,272,556	+		Pf6N2E2_1088	0.21	+0.3
1,272,640	-				-1.1
1,272,641	+		Pf6N2E2_1088	0.23	-1.4
1,272,641	+		Pf6N2E2_1088	0.23	-0.5
1,272,641	+		Pf6N2E2_1088	0.23	-0.3
1,272,641	+		Pf6N2E2_1088	0.23	-3.1
1,272,641	+		Pf6N2E2_1088	0.23	-0.1
1,272,642	-		Pf6N2E2_1088	0.23	-0.5
1,272,668	+		Pf6N2E2_1088	0.23	+2.6
1,272,668	+		Pf6N2E2_1088	0.23	+0.5
1,272,668	+		Pf6N2E2_1088	0.23	+0.5
1,272,668	+		Pf6N2E2_1088	0.23	-1.4
1,272,668	+		Pf6N2E2_1088	0.23	-0.9
1,272,668	+		Pf6N2E2_1088	0.23	+0.5
1,272,835	-		Pf6N2E2_1088	0.27	+0.5
1,272,954	-		Pf6N2E2_1088	0.29	+0.5
1,273,258	+		Pf6N2E2_1088	0.36	-1.1
1,273,258	+		Pf6N2E2_1088	0.36	+0.3
1,273,340	+		Pf6N2E2_1088	0.37	-1.1
1,273,340	+		Pf6N2E2_1088	0.37	-0.8
1,273,385	+		Pf6N2E2_1088	0.38	-1.0
1,273,565	+		Pf6N2E2_1088	0.42	+1.3
1,273,677	+		Pf6N2E2_1088	0.44	+0.5
1,273,678	-		Pf6N2E2_1088	0.44	-2.1
1,273,678	-		Pf6N2E2_1088	0.44	-2.1
1,273,919	+		Pf6N2E2_1088	0.49	-0.1
1,273,919	+		Pf6N2E2_1088	0.49	+1.5
1,273,920	-		Pf6N2E2_1088	0.49	+1.5
1,273,920	-		Pf6N2E2_1088	0.49	-2.1
1,273,949	+		Pf6N2E2_1088	0.50	-2.5
1,273,949	+		Pf6N2E2_1088	0.50	+1.8
1,273,950	-		Pf6N2E2_1088	0.50	+0.9
1,273,977	+		Pf6N2E2_1088	0.51	+1.0
1,273,978	-		Pf6N2E2_1088	0.51	-0.2
1,274,189	+		Pf6N2E2_1088	0.55	-1.4
1,274,190	-		Pf6N2E2_1088	0.55	-0.5
1,274,190	-		Pf6N2E2_1088	0.55	-1.2
1,274,264	+		Pf6N2E2_1088	0.56	-1.5
1,274,264	+		Pf6N2E2_1088	0.56	-0.3
1,274,265	-		Pf6N2E2_1088	0.56	-2.4
1,274,265	-		Pf6N2E2_1088	0.56	-2.1
1,274,265	-		Pf6N2E2_1088	0.56	-1.5
1,274,265	-		Pf6N2E2_1088	0.56	-0.5
1,274,384	-		Pf6N2E2_1088	0.59	+0.3
1,274,470	+		Pf6N2E2_1088	0.61	-1.5
1,274,474	-		Pf6N2E2_1088	0.61	+0.5
1,274,540	+		Pf6N2E2_1088	0.62	+0.5
1,274,540	+		Pf6N2E2_1088	0.62	-2.5
1,274,656	-		Pf6N2E2_1088	0.65	+0.5
1,274,720	-		Pf6N2E2_1088	0.66	-0.5
1,274,808	-		Pf6N2E2_1088	0.68	+0.9
1,274,808	-		Pf6N2E2_1088	0.68	-1.5
1,274,923	-		Pf6N2E2_1088	0.70	-2.0
1,274,938	+		Pf6N2E2_1088	0.70	-3.0
1,274,938	+		Pf6N2E2_1088	0.70	+0.5
1,274,938	+		Pf6N2E2_1088	0.70	+2.0
1,274,939	-		Pf6N2E2_1088	0.70	-0.2
1,274,939	-		Pf6N2E2_1088	0.70	-0.9
1,274,939	-		Pf6N2E2_1088	0.70	-3.5
1,275,005	+		Pf6N2E2_1088	0.72	-2.1
1,275,006	-		Pf6N2E2_1088	0.72	-0.9
1,275,015	+		Pf6N2E2_1088	0.72	-1.5
1,275,143	+		Pf6N2E2_1088	0.75	+0.5
1,275,143	+		Pf6N2E2_1088	0.75	+1.5
1,275,214	+		Pf6N2E2_1088	0.76	-1.1
1,275,214	+				-0.5
1,275,242	+		Pf6N2E2_1088	0.77	+0.5
1,275,243	-		Pf6N2E2_1088	0.77	+0.8
1,275,243	-		Pf6N2E2_1088	0.77	+1.5
1,275,248	+		Pf6N2E2_1088	0.77	+1.2
1,275,248	+		Pf6N2E2_1088	0.77	-0.2
1,275,248	+		Pf6N2E2_1088	0.77	+0.5
1,275,249	-		Pf6N2E2_1088	0.77	+1.0
1,275,290	-		Pf6N2E2_1088	0.78	+0.5
1,275,483	+		Pf6N2E2_1088	0.82	-0.1
1,275,484	-		Pf6N2E2_1088	0.82	-0.5
1,275,484	-		Pf6N2E2_1088	0.82	+0.5
1,275,485	+		Pf6N2E2_1088	0.82	-1.1
1,275,485	+		Pf6N2E2_1088	0.82	-0.5
1,275,485	+		Pf6N2E2_1088	0.82	-0.7
1,275,485	+		Pf6N2E2_1088	0.82	+0.5
1,275,485	+		Pf6N2E2_1088	0.82	-0.2
1,275,485	+		Pf6N2E2_1088	0.82	-1.1
1,275,485	+		Pf6N2E2_1088	0.82	-1.1
1,275,485	+		Pf6N2E2_1088	0.82	-0.5
1,275,486	-		Pf6N2E2_1088	0.82	-1.5
1,275,531	+		Pf6N2E2_1088	0.83	+1.6
1,275,665	+		Pf6N2E2_1088	0.85	-0.5
1,275,817	+		Pf6N2E2_1088	0.89	+0.9
1,275,817	+		Pf6N2E2_1088	0.89	-1.4
1,275,818	-		Pf6N2E2_1088	0.89	-0.5
1,276,330	+				-0.7
1,276,343	-				+0.5
1,276,454	+				-0.5
1,276,454	+				-2.4
1,276,458	+				-0.5
1,276,458	+				-0.2
1,276,458	+				-1.5
1,276,458	+				-1.9
1,276,458	+				+0.2
1,276,458	+				-0.7
1,276,458	+				+1.8
1,276,459	-				+0.5
1,276,459	-				+0.9
1,276,459	-				+0.0
1,276,459	-				-1.9
1,276,459	-				-0.5
1,276,542	+				-1.9
1,276,543	-				-1.1
1,276,563	+				-1.1
1,276,563	+				-0.7
1,276,574	+				+0.7
1,276,575	-				-1.9
1,276,787	-		Pf6N2E2_1089	0.18	+0.6
1,276,787	-		Pf6N2E2_1089	0.18	+0.5
1,277,017	+		Pf6N2E2_1089	0.40	+0.6