Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28850

Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with MOPS
6,414,252	+				+1.0
6,414,252	+				+0.5
6,414,252	+				+1.2
6,414,252	+				+0.9
6,414,252	+				+1.2
6,414,252	+				+0.0
6,414,252	+				+0.1
6,414,252	+				-0.5
6,414,252	+				+1.6
6,414,252	+				-1.1
6,414,252	+				+0.2
6,414,252	+				+1.3
6,414,252	+				-1.0
6,414,252	+				+0.1
6,414,252	+				+0.1
6,414,252	+				+0.3
6,414,252	+				-0.5
6,414,252	+				+0.8
6,414,252	+				+0.9
6,414,252	+				+0.7
6,414,252	+				-0.0
6,414,252	+				-0.1
6,414,252	+				+0.5
6,414,252	+				+1.2
6,414,253	-				+0.9
6,414,253	-				-0.8
6,414,253	-				+0.7
6,414,253	-				-0.6
6,414,253	-				-0.8
6,414,253	-				-0.9
6,414,253	-				-1.8
6,414,253	-				-0.2
6,414,253	-				+0.8
6,414,253	-				-0.9
6,414,253	-				+0.7
6,414,253	-				+0.1
6,414,253	-				-0.5
6,414,253	-				-0.2
6,414,253	-				-0.8
6,414,253	-				-0.8
6,414,253	-				-1.0
6,414,253	-				+0.4
6,414,253	-				+0.1
6,414,253	-				-0.8
6,414,253	-				-0.1
6,414,253	-				-0.4
6,414,255	-				-0.4
6,414,255	-				-0.5
6,414,294	-				-0.4
6,414,294	-				+0.2
6,414,294	-				-0.8
6,414,485	+		PFLU_RS28845	0.35	+1.0
6,414,485	+		PFLU_RS28845	0.35	+0.1
6,414,578	+		PFLU_RS28845	0.49	+0.4
6,414,578	+		PFLU_RS28845	0.49	+0.8
6,414,578	+		PFLU_RS28845	0.49	-0.8
6,414,578	+		PFLU_RS28845	0.49	+1.8
6,414,578	+		PFLU_RS28845	0.49	+1.0
6,414,578	+		PFLU_RS28845	0.49	+1.2
6,414,578	+		PFLU_RS28845	0.49	-0.0
6,414,579	-		PFLU_RS28845	0.50	+1.5
6,414,579	-		PFLU_RS28845	0.50	-0.7
6,414,579	-		PFLU_RS28845	0.50	+0.2
6,414,814	-		PFLU_RS28845	0.86	+0.3
6,414,892	+				-0.2
6,414,893	-				-1.1
6,414,893	-				-0.4
6,414,893	-				+0.1
6,414,923	+				+0.6
6,414,924	-				+0.1
6,414,924	-				+1.0
6,414,924	-				+0.2
6,414,924	-				-0.0
6,415,025	+				+0.8
6,415,025	+				+0.5
6,415,025	+				+1.0
6,415,025	+				+1.2
6,415,025	+				+0.4
6,415,025	+				+0.6
6,415,025	+				+0.5
6,415,025	+				+1.7
6,415,025	+				+0.2
6,415,025	+				-0.8
6,415,026	-				+0.5
6,415,026	-				-0.2
6,415,026	-				-0.4
6,415,026	-				-1.1
6,415,026	-				+0.1
6,415,026	-				-0.3
6,415,026	-				+0.1
6,415,026	-				+0.3
6,415,026	-				-1.4
6,415,078	+				+1.2
6,415,078	+				+0.1
6,415,078	+				-0.3
6,415,078	+				+1.0
6,415,079	-				-0.4
6,415,079	-				+0.6
6,415,079	-				-1.1
6,415,079	-				-1.1
6,415,079	-				-0.2
6,415,079	-				-1.2
6,415,130	+				+0.3
6,415,131	-				-0.6
6,415,131	-				-0.6
6,415,131	-				+0.2
6,415,167	+				+1.6
6,415,175	+				+1.4
6,415,175	+				+2.0
6,415,176	-				+0.3
6,415,176	-				-0.7
6,415,187	+				-0.3
6,415,187	+				+2.4
6,415,187	+				+2.2
6,415,187	+				+1.7
6,415,187	+				+2.3
6,415,188	-				+1.6
6,415,188	-				+0.7
6,415,188	-				+2.8
6,415,188	-				+1.7
6,415,188	-				+1.1
6,415,188	-				+1.5
6,415,193	+				+2.0
6,415,193	+				+1.9
6,415,193	+				+2.3
6,415,193	+				+2.7
6,415,193	+				+2.6
6,415,193	+				+1.5
6,415,193	+				+1.5
6,415,193	+				+2.0
6,415,193	+				+1.5
6,415,193	+				+2.6
6,415,193	+				+1.2
6,415,193	+				+1.9
6,415,193	+				+1.5
6,415,194	-				+1.3
6,415,194	-				+1.4
6,415,194	-				+2.7
6,415,194	-				+1.6
6,415,194	-				+2.0
6,415,194	-				+2.1
6,415,194	-				+1.5
6,415,194	-				+1.5
6,415,194	-				+2.4
6,415,194	-				+2.1
6,415,194	-				+1.6
6,415,194	-				+1.9
6,415,194	-				+2.3
6,415,194	-				+2.1
6,415,198	+				+2.6
6,415,198	+				+2.0
6,415,198	+				+2.2
6,415,198	+				+3.5
6,415,198	+				+1.9
6,415,198	+				+2.0
6,415,198	+				+1.8
6,415,198	+				+0.3
6,415,198	+				+1.4
6,415,198	+				+1.7
6,415,198	+				+2.3
6,415,198	+				+2.6
6,415,198	+				+2.7
6,415,199	-				+2.6
6,415,199	-				+1.8
6,415,199	-				+1.7
6,415,199	-				+1.5
6,415,199	-				+1.6
6,415,199	-				+3.3
6,415,254	+				+2.5
6,415,254	+				+1.5
6,415,254	+				+1.5
6,415,255	-				+2.1
6,415,255	-				+2.1
6,415,255	-				+2.2
6,415,255	-				+2.3
6,415,255	-				+2.0
6,415,255	-				+0.8
6,415,301	-				+1.7
6,415,301	-				+1.5
6,415,307	+				+1.7
6,415,307	+				+1.9
6,415,307	+				+1.1
6,415,307	+				+3.1
6,415,307	+				+0.8
6,415,308	-				+1.9
6,415,308	-				+2.3
6,415,308	-				+1.5
6,415,308	-				+1.0
6,415,308	-				+1.9
6,415,308	-				+2.2
6,415,308	-				+2.5
6,415,386	+		PFLU_RS28850	0.15	+2.1
6,415,386	+		PFLU_RS28850	0.15	+2.1
6,415,397	+		PFLU_RS28850	0.16	+1.8
6,415,397	+		PFLU_RS28850	0.16	+2.7
6,415,397	+		PFLU_RS28850	0.16	+3.9
6,415,397	+		PFLU_RS28850	0.16	+2.0
6,415,397	+		PFLU_RS28850	0.16	+2.0
6,415,397	+		PFLU_RS28850	0.16	+1.8
6,415,398	-		PFLU_RS28850	0.16	+2.5
6,415,398	-		PFLU_RS28850	0.16	+1.4
6,415,398	-		PFLU_RS28850	0.16	+1.6
6,415,398	-		PFLU_RS28850	0.16	+2.1
6,415,398	-		PFLU_RS28850	0.16	+2.4
6,415,398	-		PFLU_RS28850	0.16	+2.6
6,415,398	-		PFLU_RS28850	0.16	+0.9
6,415,445	+		PFLU_RS28850	0.20	+1.0
6,415,445	+		PFLU_RS28850	0.20	+2.0
6,415,445	+		PFLU_RS28850	0.20	+1.6
6,415,445	+		PFLU_RS28850	0.20	+2.1
6,415,445	+		PFLU_RS28850	0.20	+2.7
6,415,446	-		PFLU_RS28850	0.20	+2.2
6,415,446	-		PFLU_RS28850	0.20	+1.9
6,415,446	-		PFLU_RS28850	0.20	+1.7
6,415,467	+		PFLU_RS28850	0.21	+1.4
6,415,467	+		PFLU_RS28850	0.21	+1.6
6,415,467	+		PFLU_RS28850	0.21	+2.5
6,415,467	+		PFLU_RS28850	0.21	+3.3
6,415,467	+		PFLU_RS28850	0.21	+2.0
6,415,467	+		PFLU_RS28850	0.21	+1.7
6,415,468	-		PFLU_RS28850	0.21	+1.1
6,415,468	-		PFLU_RS28850	0.21	+1.9
6,415,468	-		PFLU_RS28850	0.21	+0.8
6,415,468	-		PFLU_RS28850	0.21	+1.5
6,415,517	+		PFLU_RS28850	0.25	+2.0
6,415,517	+		PFLU_RS28850	0.25	+1.4
6,415,518	-		PFLU_RS28850	0.25	+2.5
6,415,518	-		PFLU_RS28850	0.25	+1.8
6,415,518	-		PFLU_RS28850	0.25	+1.7
6,415,596	+		PFLU_RS28850	0.31	+1.9
6,415,596	+		PFLU_RS28850	0.31	+2.0
6,415,596	+		PFLU_RS28850	0.31	+2.0
6,415,596	+		PFLU_RS28850	0.31	+1.7
6,415,596	+		PFLU_RS28850	0.31	+1.2
6,415,596	+		PFLU_RS28850	0.31	+2.3
6,415,597	-		PFLU_RS28850	0.31	+2.9
6,415,597	-		PFLU_RS28850	0.31	+1.2
6,415,597	-		PFLU_RS28850	0.31	+2.1
6,415,597	-		PFLU_RS28850	0.31	+2.3
6,415,597	-		PFLU_RS28850	0.31	+2.1
6,415,597	-		PFLU_RS28850	0.31	+1.2
6,415,597	-		PFLU_RS28850	0.31	+1.9
6,415,597	-		PFLU_RS28850	0.31	+2.0
6,415,597	-		PFLU_RS28850	0.31	+2.8
6,415,597	-		PFLU_RS28850	0.31	+2.0
6,415,597	-		PFLU_RS28850	0.31	+1.6
6,415,613	+		PFLU_RS28850	0.32	+1.7
6,415,613	+		PFLU_RS28850	0.32	+2.9
6,415,614	-		PFLU_RS28850	0.32	+2.4
6,415,614	-		PFLU_RS28850	0.32	+1.8
6,415,614	-		PFLU_RS28850	0.32	+1.9
6,415,614	-		PFLU_RS28850	0.32	+2.5
6,415,631	+		PFLU_RS28850	0.33	+2.7
6,415,631	+		PFLU_RS28850	0.33	+2.4
6,415,631	+		PFLU_RS28850	0.33	+1.7
6,415,631	+		PFLU_RS28850	0.33	+1.4
6,415,632	-		PFLU_RS28850	0.33	+2.7
6,415,641	+		PFLU_RS28850	0.34	+1.9
6,415,641	+		PFLU_RS28850	0.34	+1.7
6,415,676	+		PFLU_RS28850	0.37	+2.5
6,415,676	+		PFLU_RS28850	0.37	+2.0
6,415,676	+		PFLU_RS28850	0.37	+2.7
6,415,676	+		PFLU_RS28850	0.37	+2.0
6,415,676	+		PFLU_RS28850	0.37	+1.8
6,415,676	+		PFLU_RS28850	0.37	+3.0
6,415,676	+		PFLU_RS28850	0.37	+2.1
6,415,677	-		PFLU_RS28850	0.37	+1.4
6,415,677	-		PFLU_RS28850	0.37	+2.3
6,415,677	-		PFLU_RS28850	0.37	+1.7
6,415,677	-		PFLU_RS28850	0.37	+2.0
6,415,677	-		PFLU_RS28850	0.37	+1.7
6,415,677	-		PFLU_RS28850	0.37	+1.2
6,415,677	-		PFLU_RS28850	0.37	+2.1
6,415,677	-		PFLU_RS28850	0.37	+1.5
6,415,680	+		PFLU_RS28850	0.37	+1.5
6,415,694	+		PFLU_RS28850	0.38	+2.7
6,415,694	+		PFLU_RS28850	0.38	+2.6
6,415,694	+		PFLU_RS28850	0.38	+1.6
6,415,694	+		PFLU_RS28850	0.38	+2.8
6,415,694	+		PFLU_RS28850	0.38	+2.4
6,415,694	+		PFLU_RS28850	0.38	+2.0
6,415,695	-		PFLU_RS28850	0.38	+1.8
6,415,695	-		PFLU_RS28850	0.38	+2.9
6,415,695	-		PFLU_RS28850	0.38	+2.0
6,415,695	-		PFLU_RS28850	0.38	+0.8
6,415,695	-		PFLU_RS28850	0.38	+1.2
6,415,695	-		PFLU_RS28850	0.38	+2.2
6,415,739	+		PFLU_RS28850	0.41	+2.4
6,415,739	+		PFLU_RS28850	0.41	+2.0
6,415,739	+		PFLU_RS28850	0.41	+4.5
6,415,739	+		PFLU_RS28850	0.41	+2.6
6,415,740	-		PFLU_RS28850	0.41	+1.4
6,415,740	-		PFLU_RS28850	0.41	+1.3
6,415,740	-		PFLU_RS28850	0.41	+2.6
6,415,740	-		PFLU_RS28850	0.41	+0.9
6,415,759	+		PFLU_RS28850	0.43	+1.6
6,415,760	-		PFLU_RS28850	0.43	+2.0
6,415,811	+		PFLU_RS28850	0.46	+2.5
6,415,812	-		PFLU_RS28850	0.46	+2.9
6,415,812	-		PFLU_RS28850	0.46	+2.2
6,415,832	+		PFLU_RS28850	0.48	+2.8
6,415,832	+		PFLU_RS28850	0.48	+2.1
6,415,832	+		PFLU_RS28850	0.48	+2.7
6,415,832	+		PFLU_RS28850	0.48	+0.9
6,415,833	-		PFLU_RS28850	0.48	+2.3
6,415,833	-		PFLU_RS28850	0.48	+2.1
6,415,833	-		PFLU_RS28850	0.48	+1.8
6,415,833	-		PFLU_RS28850	0.48	+1.7
6,415,835	+		PFLU_RS28850	0.48	+1.5
6,415,835	+		PFLU_RS28850	0.48	+2.1
6,415,835	+		PFLU_RS28850	0.48	+2.8
6,415,835	+		PFLU_RS28850	0.48	+2.4
6,415,835	+		PFLU_RS28850	0.48	+2.0
6,415,835	+		PFLU_RS28850	0.48	+1.4
6,415,835	+		PFLU_RS28850	0.48	+1.4
6,415,835	+		PFLU_RS28850	0.48	-0.7
6,415,835	+		PFLU_RS28850	0.48	+1.8
6,415,835	+		PFLU_RS28850	0.48	+1.6
6,415,835	+		PFLU_RS28850	0.48	+1.5
6,415,835	+		PFLU_RS28850	0.48	+2.9
6,415,835	+		PFLU_RS28850	0.48	+2.5
6,415,836	-		PFLU_RS28850	0.48	+2.3
6,415,836	-		PFLU_RS28850	0.48	+1.2
6,415,836	-		PFLU_RS28850	0.48	+2.1
6,415,836	-		PFLU_RS28850	0.48	+2.5
6,415,836	-		PFLU_RS28850	0.48	+2.4
6,415,836	-		PFLU_RS28850	0.48	+2.5
6,415,836	-		PFLU_RS28850	0.48	+2.2
6,415,836	-		PFLU_RS28850	0.48	+2.6
6,415,839	-		PFLU_RS28850	0.48	+2.0
6,415,839	-		PFLU_RS28850	0.48	+0.4
6,415,839	-		PFLU_RS28850	0.48	+2.3
6,415,839	-		PFLU_RS28850	0.48	+0.4
6,415,839	-		PFLU_RS28850	0.48	+2.5
6,415,839	-		PFLU_RS28850	0.48	+1.9
6,415,839	-		PFLU_RS28850	0.48	+2.3
6,415,868	+		PFLU_RS28850	0.51	+2.3
6,415,869	-		PFLU_RS28850	0.51	+2.0
6,415,869	-		PFLU_RS28850	0.51	+0.2
6,415,869	-		PFLU_RS28850	0.51	+1.7
6,415,883	+		PFLU_RS28850	0.52	+4.0
6,415,883	+		PFLU_RS28850	0.52	+0.7
6,415,883	+		PFLU_RS28850	0.52	+1.0
6,415,883	+		PFLU_RS28850	0.52	+1.2
6,415,883	+		PFLU_RS28850	0.52	+2.1
6,415,884	-		PFLU_RS28850	0.52	+1.8
6,415,884	-		PFLU_RS28850	0.52	+1.6
6,415,884	-		PFLU_RS28850	0.52	+2.6
6,415,884	-		PFLU_RS28850	0.52	+2.5
6,415,886	+		PFLU_RS28850	0.52	+2.4
6,415,886	+		PFLU_RS28850	0.52	+1.6
6,415,886	+		PFLU_RS28850	0.52	+2.4
6,415,886	+		PFLU_RS28850	0.52	+1.6
6,415,886	+		PFLU_RS28850	0.52	+2.8
6,415,886	+		PFLU_RS28850	0.52	+1.4
6,415,886	+		PFLU_RS28850	0.52	+1.6
6,415,886	+		PFLU_RS28850	0.52	+2.4
6,415,886	+		PFLU_RS28850	0.52	+2.0
6,415,886	+		PFLU_RS28850	0.52	+2.1
6,415,886	+		PFLU_RS28850	0.52	+2.3
6,415,886	+		PFLU_RS28850	0.52	+2.2
6,415,886	+		PFLU_RS28850	0.52	+1.8
6,415,886	+		PFLU_RS28850	0.52	+2.0
6,415,886	+		PFLU_RS28850	0.52	+1.5
6,415,886	+		PFLU_RS28850	0.52	+0.7
6,415,886	+		PFLU_RS28850	0.52	+0.6
6,415,886	+		PFLU_RS28850	0.52	+3.1
6,415,886	+		PFLU_RS28850	0.52	+1.9
6,415,886	+		PFLU_RS28850	0.52	+2.3
6,415,887	-		PFLU_RS28850	0.52	+2.1
6,415,887	-		PFLU_RS28850	0.52	+2.0
6,415,887	-		PFLU_RS28850	0.52	+1.0
6,415,887	-		PFLU_RS28850	0.52	+2.5
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