Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16100

Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with MOPS
3,656,897	+		PFLU_RS16095	0.24	-0.2
3,656,897	+		PFLU_RS16095	0.24	-0.0
3,656,898	-		PFLU_RS16095	0.24	-0.8
3,656,898	-		PFLU_RS16095	0.24	-0.5
3,657,023	+		PFLU_RS16095	0.34	+0.6
3,657,023	+		PFLU_RS16095	0.34	+1.0
3,657,023	+		PFLU_RS16095	0.34	-0.3
3,657,023	+		PFLU_RS16095	0.34	+1.4
3,657,023	+		PFLU_RS16095	0.34	-3.5
3,657,023	+		PFLU_RS16095	0.34	+0.3
3,657,023	+		PFLU_RS16095	0.34	-0.2
3,657,023	+		PFLU_RS16095	0.34	+0.9
3,657,024	-		PFLU_RS16095	0.35	+1.8
3,657,024	-		PFLU_RS16095	0.35	-0.3
3,657,024	-		PFLU_RS16095	0.35	-0.6
3,657,151	-		PFLU_RS16095	0.45	+0.6
3,657,272	+		PFLU_RS16095	0.55	-0.4
3,657,272	+		PFLU_RS16095	0.55	+0.7
3,657,272	+		PFLU_RS16095	0.55	+0.3
3,657,273	-		PFLU_RS16095	0.55	+0.2
3,657,273	-		PFLU_RS16095	0.55	-0.0
3,657,296	+		PFLU_RS16095	0.57	-0.4
3,657,296	+		PFLU_RS16095	0.57	+0.6
3,657,296	+		PFLU_RS16095	0.57	-0.1
3,657,296	+		PFLU_RS16095	0.57	+1.2
3,657,296	+		PFLU_RS16095	0.57	-0.7
3,657,296	+		PFLU_RS16095	0.57	-0.2
3,657,296	+		PFLU_RS16095	0.57	+0.1
3,657,296	+		PFLU_RS16095	0.57	+0.2
3,657,296	+		PFLU_RS16095	0.57	+1.1
3,657,296	+		PFLU_RS16095	0.57	-0.0
3,657,296	+		PFLU_RS16095	0.57	-0.7
3,657,296	+		PFLU_RS16095	0.57	-0.5
3,657,296	+		PFLU_RS16095	0.57	-0.0
3,657,296	+		PFLU_RS16095	0.57	+0.4
3,657,296	+		PFLU_RS16095	0.57	-0.1
3,657,296	+		PFLU_RS16095	0.57	+1.8
3,657,297	-		PFLU_RS16095	0.57	+0.1
3,657,297	-		PFLU_RS16095	0.57	-0.9
3,657,297	-		PFLU_RS16095	0.57	+0.6
3,657,297	-		PFLU_RS16095	0.57	+0.7
3,657,297	-		PFLU_RS16095	0.57	+1.0
3,657,297	-		PFLU_RS16095	0.57	-1.3
3,657,297	-		PFLU_RS16095	0.57	+1.6
3,657,297	-		PFLU_RS16095	0.57	+1.1
3,657,297	-		PFLU_RS16095	0.57	-0.7
3,657,297	-		PFLU_RS16095	0.57	+0.6
3,657,297	-		PFLU_RS16095	0.57	+0.7
3,657,297	-		PFLU_RS16095	0.57	-1.5
3,657,297	-		PFLU_RS16095	0.57	+1.5
3,657,297	-		PFLU_RS16095	0.57	+0.2
3,657,297	-		PFLU_RS16095	0.57	-0.4
3,657,297	-		PFLU_RS16095	0.57	-0.6
3,657,297	-		PFLU_RS16095	0.57	-0.9
3,657,297	-		PFLU_RS16095	0.57	+1.5
3,657,297	-		PFLU_RS16095	0.57	+0.5
3,657,297	-		PFLU_RS16095	0.57	-0.4
3,657,297	-		PFLU_RS16095	0.57	-0.0
3,657,297	-		PFLU_RS16095	0.57	+0.1
3,657,346	+		PFLU_RS16095	0.61	+0.2
3,657,576	-		PFLU_RS16095	0.80	+0.6
3,657,576	-		PFLU_RS16095	0.80	-1.0
3,657,597	-		PFLU_RS16095	0.82	-0.3
3,657,794	-				+0.4
3,657,794	-				-0.9
3,657,862	+				+0.7
3,657,862	+				-0.6
3,657,901	+		PFLU_RS16100	0.11	-0.5
3,657,901	+		PFLU_RS16100	0.11	+1.0
3,657,901	+		PFLU_RS16100	0.11	-0.5
3,657,901	+		PFLU_RS16100	0.11	+0.4
3,657,901	+		PFLU_RS16100	0.11	-0.7
3,657,901	+		PFLU_RS16100	0.11	+1.4
3,657,901	+		PFLU_RS16100	0.11	+0.1
3,657,901	+		PFLU_RS16100	0.11	+0.4
3,657,902	-		PFLU_RS16100	0.12	-2.4
3,657,902	-		PFLU_RS16100	0.12	-0.1
3,657,902	-		PFLU_RS16100	0.12	+0.0
3,657,902	-		PFLU_RS16100	0.12	-0.7
3,657,902	-		PFLU_RS16100	0.12	+0.7
3,657,994	+		PFLU_RS16100	0.21	+0.6
3,658,002	+		PFLU_RS16100	0.22	-1.0
3,658,003	-		PFLU_RS16100	0.22	-0.8
3,658,033	+		PFLU_RS16100	0.25	-0.5
3,658,033	+		PFLU_RS16100	0.25	+0.2
3,658,033	+		PFLU_RS16100	0.25	-0.4
3,658,033	+		PFLU_RS16100	0.25	-0.1
3,658,033	+		PFLU_RS16100	0.25	+0.1
3,658,034	-		PFLU_RS16100	0.26	-0.9
3,658,034	-		PFLU_RS16100	0.26	+1.0
3,658,034	-		PFLU_RS16100	0.26	-0.5
3,658,034	-		PFLU_RS16100	0.26	+0.4
3,658,034	-		PFLU_RS16100	0.26	+0.4
3,658,034	-		PFLU_RS16100	0.26	+0.4
3,658,034	-		PFLU_RS16100	0.26	+1.3
3,658,133	-		PFLU_RS16100	0.36	+0.2
3,658,133	-		PFLU_RS16100	0.36	-2.1
3,658,133	-		PFLU_RS16100	0.36	+0.8
3,658,174	+		PFLU_RS16100	0.40	+0.0
3,658,174	+		PFLU_RS16100	0.40	+0.3
3,658,174	+		PFLU_RS16100	0.40	+0.6
3,658,175	-		PFLU_RS16100	0.40	-0.5
3,658,175	-		PFLU_RS16100	0.40	+0.3
3,658,187	-		PFLU_RS16100	0.42	+0.9
3,658,187	-		PFLU_RS16100	0.42	+0.9
3,658,190	-		PFLU_RS16100	0.42	-0.4
3,658,242	-		PFLU_RS16100	0.47	-0.5
3,658,243	+		PFLU_RS16100	0.48	-0.6
3,658,243	+		PFLU_RS16100	0.48	+0.3
3,658,243	+		PFLU_RS16100	0.48	+0.5
3,658,243	+		PFLU_RS16100	0.48	+0.4
3,658,243	+		PFLU_RS16100	0.48	+1.8
3,658,244	-		PFLU_RS16100	0.48	-0.7
3,658,244	-		PFLU_RS16100	0.48	-0.1
3,658,244	-		PFLU_RS16100	0.48	+0.4
3,658,386	-		PFLU_RS16100	0.63	-0.5
3,658,386	-		PFLU_RS16100	0.63	-0.8
3,658,477	+		PFLU_RS16100	0.72	-1.4
3,658,477	+		PFLU_RS16100	0.72	-0.9
3,658,477	+		PFLU_RS16100	0.72	+0.3
3,658,477	+		PFLU_RS16100	0.72	-0.6
3,658,477	+		PFLU_RS16100	0.72	-1.3
3,658,478	-		PFLU_RS16100	0.72	+0.4
3,658,478	-		PFLU_RS16100	0.72	-0.1
3,658,478	-		PFLU_RS16100	0.72	-0.4
3,658,478	-		PFLU_RS16100	0.72	+0.1
3,658,478	-		PFLU_RS16100	0.72	-0.6
3,658,478	-		PFLU_RS16100	0.72	+0.1
3,658,573	+		PFLU_RS16100	0.82	+0.5
3,658,573	+		PFLU_RS16100	0.82	-0.9
3,658,573	+		PFLU_RS16100	0.82	+0.4
3,658,574	-		PFLU_RS16100	0.82	-0.0
3,658,574	-		PFLU_RS16100	0.82	-0.2
3,658,574	-		PFLU_RS16100	0.82	-1.1
3,658,574	-		PFLU_RS16100	0.82	+0.6
3,658,630	+		PFLU_RS16100	0.88	+1.0
3,658,727	+				+0.5
3,658,727	+				+0.8
3,658,727	+				+0.1
3,658,728	-				-2.0
3,658,753	+				+1.0
3,658,753	+				-0.2
3,658,822	+				-0.1
3,658,823	-				-1.1
3,658,828	+				+0.2
3,658,828	+				+1.0
3,658,828	+				-0.1
3,658,829	-				-0.4
3,659,113	+		PFLU_RS16105	0.38	+0.6
3,659,113	+		PFLU_RS16105	0.38	-1.1
3,659,113	+		PFLU_RS16105	0.38	+1.3
3,659,114	-		PFLU_RS16105	0.38	+0.4
3,659,114	-		PFLU_RS16105	0.38	-0.9
3,659,119	+		PFLU_RS16105	0.39	-0.3
3,659,119	+		PFLU_RS16105	0.39	-0.1
3,659,119	+		PFLU_RS16105	0.39	+0.6
3,659,120	-		PFLU_RS16105	0.39	-0.7
3,659,294	+		PFLU_RS16105	0.62	-0.7
3,659,294	+		PFLU_RS16105	0.62	-1.9
3,659,294	+		PFLU_RS16105	0.62	+1.8
3,659,294	+		PFLU_RS16105	0.62	-0.2
3,659,294	+		PFLU_RS16105	0.62	-0.3
3,659,295	-		PFLU_RS16105	0.62	-0.0
3,659,295	-		PFLU_RS16105	0.62	-0.6
3,659,295	-		PFLU_RS16105	0.62	+0.6
3,659,295	-		PFLU_RS16105	0.62	-0.9
3,659,314	+		PFLU_RS16105	0.64	+0.4
3,659,314	+		PFLU_RS16105	0.64	-0.0
3,659,315	-		PFLU_RS16105	0.64	-0.2
3,659,315	-		PFLU_RS16105	0.64	+0.6
3,659,315	-		PFLU_RS16105	0.64	+1.0
3,659,315	-		PFLU_RS16105	0.64	-1.6
3,659,576	+				-0.3
3,659,576	+				-0.0
3,659,576	+				-0.1
3,659,577	-				-0.4
3,659,578	+				+0.2
3,659,578	+				+0.0
3,659,578	+				-0.1
3,659,578	+				+1.0
3,659,578	+				-1.0
3,659,578	+				-1.1
3,659,579	-				-0.6
3,659,579	-				+0.6
3,659,610	+				-0.8
3,659,610	+				-1.1
3,659,610	+				+0.6
3,659,610	+				+0.3
3,659,611	-				-2.2
3,659,612	+				+0.3
3,659,612	+				-0.6
3,659,613	-				-1.5
3,659,613	-				-1.4
3,659,613	-				-0.9
3,659,613	-				-0.4
3,659,650	+				-1.4
3,659,714	-				-0.9
3,659,733	+				-0.2
3,659,734	-				-1.6
3,659,734	-				-1.0