Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26970

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
6,018,439	-		PFLU_RS26965	0.79	-1.9
6,018,450	+		PFLU_RS26965	0.80	-2.4
6,018,450	+		PFLU_RS26965	0.80	+1.3
6,018,451	-		PFLU_RS26965	0.80	-2.3
6,018,451	-		PFLU_RS26965	0.80	+0.5
6,018,451	-		PFLU_RS26965	0.80	-1.9
6,018,451	-		PFLU_RS26965	0.80	+2.4
6,018,451	-		PFLU_RS26965	0.80	-1.2
6,018,518	-		PFLU_RS26965	0.83	+2.7
6,018,545	-		PFLU_RS26965	0.84	-0.7
6,018,851	+				+3.1
6,018,851	+				+2.2
6,018,851	+				-2.1
6,018,851	+				-0.8
6,018,851	+				+2.9
6,018,852	-				-1.4
6,018,852	-				+1.4
6,018,852	-				-1.2
6,018,863	+				-0.8
6,018,864	-				+3.6
6,018,864	-				+3.9
6,018,967	+				+1.8
6,018,967	+				+3.0
6,018,967	+				-2.4
6,018,967	+				-1.5
6,018,967	+				+0.1
6,018,967	+				-1.8
6,018,967	+				-0.8
6,018,967	+				-1.8
6,018,968	-				+0.4
6,018,968	-				-1.5
6,018,968	-				-1.0
6,018,968	-				-1.2
6,018,968	-				+4.3
6,018,968	-				-0.6
6,018,968	-				-2.0
6,019,065	+				+0.1
6,019,116	+		PFLU_RS31820	0.43	+0.1
6,019,117	-		PFLU_RS31820	0.44	+3.5
6,019,117	-		PFLU_RS31820	0.44	+1.6
6,019,117	-		PFLU_RS31820	0.44	+4.5
6,019,158	+		PFLU_RS31820	0.75	+3.0
6,019,158	+		PFLU_RS31820	0.75	-1.4
6,019,158	+		PFLU_RS31820	0.75	-1.2
6,019,158	+		PFLU_RS31820	0.75	+0.8
6,019,158	+		PFLU_RS31820	0.75	-2.1
6,019,159	-		PFLU_RS31820	0.76	-1.6
6,019,159	-		PFLU_RS31820	0.76	+2.8
6,019,207	+				-1.4
6,019,207	+				-2.3
6,019,207	+				-0.4
6,019,207	+				-1.8
6,019,207	+				+1.9
6,019,207	+				-1.1
6,019,207	+				+2.2
6,019,208	-				+0.5
6,019,208	-				+0.5
6,019,208	-				-0.8
6,019,208	-				-1.7
6,019,208	-				-0.2
6,019,208	-				+0.3
6,019,208	-				+0.4
6,019,208	-				+0.3
6,019,208	-				+1.2
6,019,315	+				-1.7
6,019,315	+				+2.8
6,019,315	+				-1.9
6,019,315	+				+0.4
6,019,315	+				+1.4
6,019,315	+				+1.9
6,019,315	+				-1.4
6,019,315	+				-0.5
6,019,315	+				+0.9
6,019,326	+				-2.2
6,019,326	+				-0.5
6,019,326	+				+0.4
6,019,327	-				-1.8
6,019,327	-				+3.2
6,019,357	+				-0.6
6,019,357	+				-1.4
6,019,358	-				+2.5
6,019,406	+				+1.4
6,019,406	+				-1.8
6,019,406	+				-1.0
6,019,406	+				+0.8
6,019,407	-				-2.4
6,019,482	-				-0.2
6,019,641	+		PFLU_RS26970	0.30	-2.3
6,019,641	+		PFLU_RS26970	0.30	-1.2
6,019,642	-		PFLU_RS26970	0.30	-1.7
6,019,642	-		PFLU_RS26970	0.30	-0.6
6,019,698	+		PFLU_RS26970	0.37	+0.2
6,019,752	+		PFLU_RS26970	0.44	-2.1
6,019,752	+		PFLU_RS26970	0.44	-2.1
6,019,753	-		PFLU_RS26970	0.44	+2.9
6,019,753	-		PFLU_RS26970	0.44	-1.2
6,019,766	+		PFLU_RS26970	0.46	-2.9
6,019,766	+		PFLU_RS26970	0.46	-0.8
6,020,085	+		PFLU_RS26970	0.87	-0.2
6,020,085	+		PFLU_RS26970	0.87	-0.3
6,020,085	+		PFLU_RS26970	0.87	+1.9
6,020,085	+		PFLU_RS26970	0.87	-0.2
6,020,085	+		PFLU_RS26970	0.87	+1.7
6,020,085	+		PFLU_RS26970	0.87	-1.7
6,020,085	+		PFLU_RS26970	0.87	-1.8
6,020,085	+		PFLU_RS26970	0.87	-0.3
6,020,085	+		PFLU_RS26970	0.87	-1.0
6,020,085	+		PFLU_RS26970	0.87	-1.4
6,020,085	+		PFLU_RS26970	0.87	-0.4
6,020,085	+		PFLU_RS26970	0.87	-1.2
6,020,085	+		PFLU_RS26970	0.87	+3.5
6,020,085	+		PFLU_RS26970	0.87	+0.2
6,020,085	+		PFLU_RS26970	0.87	+1.1
6,020,085	+		PFLU_RS26970	0.87	+2.4
6,020,085	+		PFLU_RS26970	0.87	-1.5
6,020,085	+		PFLU_RS26970	0.87	+1.4
6,020,085	+		PFLU_RS26970	0.87	-0.7
6,020,085	+		PFLU_RS26970	0.87	+2.6
6,020,085	+		PFLU_RS26970	0.87	+0.3
6,020,085	+		PFLU_RS26970	0.87	+0.8
6,020,085	+		PFLU_RS26970	0.87	+0.1
6,020,085	+		PFLU_RS26970	0.87	+0.5
6,020,085	+		PFLU_RS26970	0.87	+2.4
6,020,085	+		PFLU_RS26970	0.87	+1.3
6,020,086	-		PFLU_RS26970	0.87	-1.9
6,020,086	-		PFLU_RS26970	0.87	-1.7
6,020,086	-		PFLU_RS26970	0.87	-1.6
6,020,086	-		PFLU_RS26970	0.87	+1.2
6,020,086	-		PFLU_RS26970	0.87	-0.9
6,020,086	-		PFLU_RS26970	0.87	+1.1
6,020,086	-		PFLU_RS26970	0.87	-0.4
6,020,086	-		PFLU_RS26970	0.87	+2.2
6,020,086	-		PFLU_RS26970	0.87	+2.9
6,020,086	-		PFLU_RS26970	0.87	-0.9
6,020,086	-		PFLU_RS26970	0.87	-1.2
6,020,086	-		PFLU_RS26970	0.87	+1.3
6,020,086	-		PFLU_RS26970	0.87	-2.1
6,020,086	-		PFLU_RS26970	0.87	+0.7
6,020,086	-		PFLU_RS26970	0.87	+1.7
6,020,086	-		PFLU_RS26970	0.87	+1.8
6,020,086	-		PFLU_RS26970	0.87	-1.7
6,020,086	-		PFLU_RS26970	0.87	-0.6
6,020,086	-		PFLU_RS26970	0.87	+2.4
6,020,086	-		PFLU_RS26970	0.87	-2.0
6,020,086	-		PFLU_RS26970	0.87	+1.0
6,020,086	-		PFLU_RS26970	0.87	+0.0
6,020,086	-		PFLU_RS26970	0.87	+1.9
6,020,086	-		PFLU_RS26970	0.87	+0.7
6,020,086	-		PFLU_RS26970	0.87	+0.5
6,020,086	-		PFLU_RS26970	0.87	-1.1
6,020,086	-		PFLU_RS26970	0.87	+2.0
6,020,086	-		PFLU_RS26970	0.87	-2.0
6,020,086	-		PFLU_RS26970	0.87	-1.9
6,020,086	-		PFLU_RS26970	0.87	-2.5
6,020,086	-		PFLU_RS26970	0.87	+2.6
6,020,108	+		PFLU_RS26970	0.90	+3.1
6,020,108	+		PFLU_RS26970	0.90	-0.9
6,020,109	-				+2.0
6,020,109	-				+1.4
6,020,109	-				-1.3
6,020,182	+				+0.2
6,020,182	+				+0.1
6,020,182	+				+0.0
6,020,182	+				+4.1
6,020,182	+				+1.1
6,020,182	+				+0.4
6,020,182	+				-0.5
6,020,182	+				+0.5
6,020,183	-				+3.3
6,020,183	-				-2.1
6,020,183	-				+1.8
6,020,183	-				+1.5
6,020,183	-				-0.6
6,020,183	-				-1.0
6,020,183	-				+1.4
6,020,183	-				+0.1
6,020,183	-				-0.8
6,020,183	-				+2.6
6,020,183	-				+0.7
6,020,183	-				-2.8
6,020,183	-				+3.7
6,020,183	-				+0.4
6,020,183	-				-1.8
6,020,196	+				+1.2
6,020,196	+				-0.8
6,020,197	-				+3.0
6,020,203	+				+3.1
6,020,203	+				-2.0
6,020,203	+				-1.8
6,020,203	+				-1.5
6,020,203	+				+0.3
6,020,203	+				-2.4
6,020,203	+				-2.0
6,020,203	+				+1.4
6,020,203	+				+3.1
6,020,203	+				-2.1
6,020,203	+				+3.6
6,020,203	+				-1.9
6,020,203	+				-1.0
6,020,203	+				-1.5
6,020,203	+				+2.5
6,020,204	-				-0.3
6,020,204	-				+1.7
6,020,204	-				+4.3
6,020,204	-				-2.5
6,020,204	-				-1.0
6,020,204	-				-2.4
6,020,204	-				+1.3
6,020,204	-				-1.0
6,020,204	-				-1.3
6,020,204	-				+3.7
6,020,204	-				+1.2
6,020,204	-				-2.1
6,020,204	-				-0.2
6,020,204	-				-1.0
6,020,204	-				+2.4
6,020,204	-				-0.9
6,020,204	-				-0.7
6,020,253	-				-0.7
6,020,303	+				+1.9
6,020,303	+				+2.3
6,020,303	+				-0.3
6,020,304	-				-2.1
6,020,304	-				+0.7
6,020,304	-				-1.1
6,020,304	-				-0.4
6,020,660	+		PFLU_RS26975	0.38	-2.2
6,020,661	-		PFLU_RS26975	0.38	-0.4
6,020,661	-		PFLU_RS26975	0.38	+0.3
6,020,661	-		PFLU_RS26975	0.38	-0.2
6,020,684	+		PFLU_RS26975	0.40	-1.9
6,020,684	+		PFLU_RS26975	0.40	-1.5
6,020,684	+		PFLU_RS26975	0.40	+1.8
6,020,684	+		PFLU_RS26975	0.40	+1.8
6,020,684	+		PFLU_RS26975	0.40	-1.0
6,020,685	-		PFLU_RS26975	0.40	+2.6
6,020,685	-		PFLU_RS26975	0.40	-2.6
6,020,685	-		PFLU_RS26975	0.40	-2.2
6,020,685	-		PFLU_RS26975	0.40	-0.9
6,020,685	-		PFLU_RS26975	0.40	+1.7
6,020,685	-		PFLU_RS26975	0.40	+2.8
6,020,757	+		PFLU_RS26975	0.45	-1.3
6,020,757	+		PFLU_RS26975	0.45	-1.4
6,020,757	+		PFLU_RS26975	0.45	-2.1
6,020,757	+		PFLU_RS26975	0.45	-2.0
6,020,758	-		PFLU_RS26975	0.46	-0.7
6,020,758	-		PFLU_RS26975	0.46	-0.8
6,020,758	-		PFLU_RS26975	0.46	+0.6
6,020,758	-		PFLU_RS26975	0.46	-1.9
6,020,758	-		PFLU_RS26975	0.46	-0.8
6,020,758	-		PFLU_RS26975	0.46	-1.1
6,020,761	+		PFLU_RS26975	0.46	-1.6
6,020,761	+		PFLU_RS26975	0.46	+2.5
6,020,761	+		PFLU_RS26975	0.46	-0.6
6,020,761	+		PFLU_RS26975	0.46	-1.4
6,020,762	-		PFLU_RS26975	0.46	-0.9
6,020,762	-		PFLU_RS26975	0.46	-0.7
6,020,762	-		PFLU_RS26975	0.46	+0.3
6,020,762	-		PFLU_RS26975	0.46	+2.0
6,020,843	+		PFLU_RS26975	0.52	+2.5
6,020,843	+		PFLU_RS26975	0.52	+1.5
6,020,885	+		PFLU_RS26975	0.56	-2.3
6,020,885	+		PFLU_RS26975	0.56	+2.2
6,020,885	+		PFLU_RS26975	0.56	+1.1
6,020,885	+		PFLU_RS26975	0.56	+0.4
6,020,885	+		PFLU_RS26975	0.56	-2.5
6,020,885	+		PFLU_RS26975	0.56	-1.3
6,020,885	+		PFLU_RS26975	0.56	-1.5
6,020,885	+		PFLU_RS26975	0.56	+2.2
6,020,885	+		PFLU_RS26975	0.56	-0.8
6,020,885	+		PFLU_RS26975	0.56	-1.1
6,020,885	+		PFLU_RS26975	0.56	+2.6
6,020,885	+		PFLU_RS26975	0.56	-0.6
6,020,885	+		PFLU_RS26975	0.56	-0.8
6,020,885	+		PFLU_RS26975	0.56	+1.7
6,020,885	+		PFLU_RS26975	0.56	-1.6
6,020,885	+		PFLU_RS26975	0.56	-2.3
6,020,885	+		PFLU_RS26975	0.56	-0.4
6,020,885	+		PFLU_RS26975	0.56	+1.9
6,020,885	+		PFLU_RS26975	0.56	-0.6
6,020,885	+		PFLU_RS26975	0.56	+3.1
6,020,885	+		PFLU_RS26975	0.56	-1.2
6,020,885	+		PFLU_RS26975	0.56	-0.7
6,020,885	+		PFLU_RS26975	0.56	-0.6
6,020,885	+		PFLU_RS26975	0.56	-0.6
6,020,885	+		PFLU_RS26975	0.56	+4.3
6,020,885	+		PFLU_RS26975	0.56	-0.6
6,020,885	+		PFLU_RS26975	0.56	+2.2
6,020,885	+		PFLU_RS26975	0.56	-0.6
6,020,885	+		PFLU_RS26975	0.56	-1.9
6,020,885	+		PFLU_RS26975	0.56	+1.7
6,020,885	+		PFLU_RS26975	0.56	-0.9
6,020,885	+		PFLU_RS26975	0.56	-0.8
6,020,885	+		PFLU_RS26975	0.56	+0.1
6,020,885	+		PFLU_RS26975	0.56	-1.6
6,020,885	+		PFLU_RS26975	0.56	+0.2
6,020,885	+		PFLU_RS26975	0.56	-0.7
6,020,885	+		PFLU_RS26975	0.56	-1.9
6,020,885	+		PFLU_RS26975	0.56	-0.9
6,020,886	-		PFLU_RS26975	0.56	-2.4
6,020,886	-		PFLU_RS26975	0.56	+0.5
6,020,886	-		PFLU_RS26975	0.56	+1.6
6,020,886	-		PFLU_RS26975	0.56	+3.0
6,020,886	-		PFLU_RS26975	0.56	-0.4
6,020,886	-		PFLU_RS26975	0.56	-1.5
6,020,886	-		PFLU_RS26975	0.56	+3.3
6,020,886	-		PFLU_RS26975	0.56	-0.7
6,020,886	-		PFLU_RS26975	0.56	+1.5
6,020,886	-		PFLU_RS26975	0.56	+1.7
6,020,886	-		PFLU_RS26975	0.56	+0.3
6,020,886	-		PFLU_RS26975	0.56	+3.3
6,020,886	-		PFLU_RS26975	0.56	-2.4
6,020,886	-		PFLU_RS26975	0.56	+0.4
6,020,886	-		PFLU_RS26975	0.56	+2.5
6,020,886	-		PFLU_RS26975	0.56	+0.6
6,020,886	-		PFLU_RS26975	0.56	-0.0
6,020,886	-		PFLU_RS26975	0.56	+2.7
6,020,886	-		PFLU_RS26975	0.56	-0.4
6,020,886	-		PFLU_RS26975	0.56	-1.1
6,020,886	-		PFLU_RS26975	0.56	+0.5
6,020,886	-		PFLU_RS26975	0.56	-0.8
6,020,886	-		PFLU_RS26975	0.56	-1.4
6,020,886	-		PFLU_RS26975	0.56	+0.1
6,020,886	-		PFLU_RS26975	0.56	-1.0
6,020,891	+		PFLU_RS26975	0.56	+0.2
6,020,891	+		PFLU_RS26975	0.56	-2.0
6,020,891	+		PFLU_RS26975	0.56	-1.1
6,020,891	+		PFLU_RS26975	0.56	+1.5
6,020,891	+		PFLU_RS26975	0.56	-0.4
6,020,891	+		PFLU_RS26975	0.56	+0.2
6,020,891	+		PFLU_RS26975	0.56	-1.2
6,020,891	+		PFLU_RS26975	0.56	+2.4
6,020,891	+		PFLU_RS26975	0.56	-1.9
6,020,891	+		PFLU_RS26975	0.56	-0.1
6,020,892	-		PFLU_RS26975	0.56	+0.1
6,020,892	-		PFLU_RS26975	0.56	+2.9
6,020,892	-		PFLU_RS26975	0.56	+1.2
6,020,936	+		PFLU_RS26975	0.60	-2.4
6,020,936	+		PFLU_RS26975	0.60	-1.6
6,020,936	+		PFLU_RS26975	0.60	+1.2
6,020,936	+		PFLU_RS26975	0.60	+0.4
6,020,936	+		PFLU_RS26975	0.60	+2.1
6,020,936	+		PFLU_RS26975	0.60	-1.9
6,020,936	+		PFLU_RS26975	0.60	+0.3
6,020,937	-		PFLU_RS26975	0.60	+1.8
6,020,937	-		PFLU_RS26975	0.60	-3.1
6,020,937	-		PFLU_RS26975	0.60	+1.8
6,020,937	-		PFLU_RS26975	0.60	-0.9
6,020,937	-		PFLU_RS26975	0.60	+0.7
6,020,937	-		PFLU_RS26975	0.60	-0.8
6,021,062	+		PFLU_RS26975	0.70	-0.3
6,021,062	+		PFLU_RS26975	0.70	-0.8
6,021,063	-		PFLU_RS26975	0.70	+3.1
6,021,063	-		PFLU_RS26975	0.70	-0.4
6,021,063	-		PFLU_RS26975	0.70	-0.2
6,021,068	+		PFLU_RS26975	0.70	+0.1
6,021,068	+		PFLU_RS26975	0.70	+0.8
6,021,068	+		PFLU_RS26975	0.70	-1.0
6,021,069	-		PFLU_RS26975	0.70	-0.2
6,021,069	-		PFLU_RS26975	0.70	+1.9
6,021,069	-		PFLU_RS26975	0.70	-0.4
6,021,069	-		PFLU_RS26975	0.70	+4.0
6,021,102	-		PFLU_RS26975	0.73	-0.4
6,021,102	-		PFLU_RS26975	0.73	-1.9