Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS25640

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
5,725,400	+				-0.6
5,725,400	+				-0.6
5,725,400	+				-0.2
5,725,400	+				-0.0
5,725,401	-				+0.1
5,725,401	-				+2.3
5,725,401	-				-1.3
5,725,401	-				+1.0
5,725,401	-				+0.2
5,725,401	-				+2.3
5,725,401	-				-0.5
5,725,401	-				-1.0
5,725,401	-				+2.4
5,725,438	+				-1.0
5,725,438	+				-1.7
5,725,438	+				-0.7
5,725,438	+				-1.2
5,725,438	+				-1.8
5,725,438	+				-0.4
5,725,438	+				+0.7
5,725,438	+				-0.4
5,725,439	-				-1.2
5,725,439	-				-2.0
5,725,439	-				-1.2
5,725,440	+				-0.2
5,725,440	+				-0.0
5,725,441	-				-0.8
5,725,476	+				-1.0
5,725,477	-				-0.4
5,725,477	-				+3.5
5,725,496	+				+0.6
5,725,496	+				+0.5
5,725,496	+				-0.9
5,725,496	+				+0.3
5,725,496	+				-0.7
5,725,496	+				+0.7
5,725,496	+				-2.1
5,725,507	+				+0.1
5,725,507	+				-1.4
5,725,507	+				+2.7
5,725,507	+				-1.0
5,725,507	+				+2.7
5,725,507	+				+0.5
5,725,507	+				+3.2
5,725,507	+				+1.7
5,725,507	+				+3.5
5,725,508	-				+0.2
5,725,508	-				-2.1
5,725,508	-				+1.5
5,725,508	-				+0.3
5,725,508	-				+0.5
5,725,508	-				+3.5
5,725,508	-				+1.5
5,725,508	-				-0.6
5,725,604	+				-1.4
5,725,605	-				-2.3
5,725,605	-				-1.4
5,725,667	-		PFLU_RS25640	0.16	+0.4
5,725,682	+		PFLU_RS25640	0.17	-1.5
5,725,682	+		PFLU_RS25640	0.17	-3.4
5,725,682	+		PFLU_RS25640	0.17	-0.7
5,725,682	+		PFLU_RS25640	0.17	-1.9
5,725,683	-		PFLU_RS25640	0.17	-2.5
5,725,683	-		PFLU_RS25640	0.17	-1.4
5,725,747	+		PFLU_RS25640	0.24	-2.9
5,725,747	+		PFLU_RS25640	0.24	-3.2
5,725,747	+		PFLU_RS25640	0.24	-0.5
5,725,748	-		PFLU_RS25640	0.24	+0.5
5,725,748	-		PFLU_RS25640	0.24	+1.2
5,725,757	-		PFLU_RS25640	0.25	-0.6
5,725,757	-		PFLU_RS25640	0.25	-0.8
5,725,780	+		PFLU_RS25640	0.27	-1.6
5,725,780	+		PFLU_RS25640	0.27	-0.8
5,725,780	+		PFLU_RS25640	0.27	-1.7
5,725,780	+		PFLU_RS25640	0.27	-2.5
5,725,780	+		PFLU_RS25640	0.27	+0.3
5,725,780	+		PFLU_RS25640	0.27	-1.9
5,725,780	+		PFLU_RS25640	0.27	-1.1
5,725,781	-		PFLU_RS25640	0.27	-1.1
5,725,781	-		PFLU_RS25640	0.27	-0.0
5,725,781	-		PFLU_RS25640	0.27	-2.2
5,725,781	-		PFLU_RS25640	0.27	-0.7
5,725,781	-		PFLU_RS25640	0.27	-2.6
5,725,781	-		PFLU_RS25640	0.27	-2.2
5,725,807	+		PFLU_RS25640	0.30	-1.4
5,725,807	+		PFLU_RS25640	0.30	-2.1
5,725,807	+		PFLU_RS25640	0.30	-1.7
5,725,807	+		PFLU_RS25640	0.30	-1.6
5,725,807	+		PFLU_RS25640	0.30	+0.3
5,725,807	+		PFLU_RS25640	0.30	-1.2
5,725,807	+		PFLU_RS25640	0.30	-0.9
5,725,807	+		PFLU_RS25640	0.30	-0.4
5,725,807	+		PFLU_RS25640	0.30	-1.5
5,725,807	+		PFLU_RS25640	0.30	-1.6
5,725,807	+		PFLU_RS25640	0.30	-1.7
5,725,807	+		PFLU_RS25640	0.30	-0.8
5,725,807	+		PFLU_RS25640	0.30	-2.1
5,725,807	+		PFLU_RS25640	0.30	-1.7
5,725,807	+		PFLU_RS25640	0.30	-0.1
5,725,808	-		PFLU_RS25640	0.30	+1.2
5,725,808	-		PFLU_RS25640	0.30	-0.8
5,725,808	-		PFLU_RS25640	0.30	-0.2
5,725,808	-		PFLU_RS25640	0.30	-2.1
5,725,808	-		PFLU_RS25640	0.30	-1.7
5,725,808	-		PFLU_RS25640	0.30	-0.7
5,725,808	-		PFLU_RS25640	0.30	-1.8
5,725,808	-		PFLU_RS25640	0.30	+0.6
5,725,808	-		PFLU_RS25640	0.30	+0.2
5,725,852	+		PFLU_RS25640	0.34	-0.1
5,725,852	+		PFLU_RS25640	0.34	-1.2
5,725,853	-		PFLU_RS25640	0.34	-1.8
5,725,870	+		PFLU_RS25640	0.36	+0.3
5,725,932	+		PFLU_RS25640	0.42	-1.6
5,725,997	+		PFLU_RS25640	0.48	-1.0
5,726,023	+		PFLU_RS25640	0.51	-1.6
5,726,024	-		PFLU_RS25640	0.51	-1.8
5,726,065	+		PFLU_RS25640	0.55	-1.9
5,726,065	+		PFLU_RS25640	0.55	-1.7
5,726,066	-		PFLU_RS25640	0.55	-2.7
5,726,066	-		PFLU_RS25640	0.55	-1.0
5,726,066	-		PFLU_RS25640	0.55	-1.0
5,726,066	-		PFLU_RS25640	0.55	-2.0
5,726,066	-		PFLU_RS25640	0.55	-1.9
5,726,066	-		PFLU_RS25640	0.55	-1.9
5,726,175	+		PFLU_RS25640	0.66	-2.2
5,726,175	+		PFLU_RS25640	0.66	-1.6
5,726,175	+		PFLU_RS25640	0.66	-1.3
5,726,176	-		PFLU_RS25640	0.66	-1.8
5,726,176	-		PFLU_RS25640	0.66	-0.2
5,726,176	-		PFLU_RS25640	0.66	-2.6
5,726,176	-		PFLU_RS25640	0.66	-3.1
5,726,176	-		PFLU_RS25640	0.66	-0.9
5,726,176	-		PFLU_RS25640	0.66	-2.1
5,726,185	+		PFLU_RS25640	0.67	-1.5
5,726,185	+		PFLU_RS25640	0.67	-1.4
5,726,185	+		PFLU_RS25640	0.67	-1.1
5,726,185	+		PFLU_RS25640	0.67	+0.6
5,726,185	+		PFLU_RS25640	0.67	-2.3
5,726,185	+		PFLU_RS25640	0.67	-2.6
5,726,185	+		PFLU_RS25640	0.67	-0.1
5,726,186	-		PFLU_RS25640	0.67	-0.4
5,726,186	-		PFLU_RS25640	0.67	-0.9
5,726,186	-		PFLU_RS25640	0.67	-2.8
5,726,186	-		PFLU_RS25640	0.67	-2.3
5,726,257	+		PFLU_RS25640	0.74	-3.0
5,726,257	+		PFLU_RS25640	0.74	-0.0
5,726,258	-		PFLU_RS25640	0.74	-1.9
5,726,258	-		PFLU_RS25640	0.74	-1.1
5,726,258	-		PFLU_RS25640	0.74	-2.1
5,726,258	-		PFLU_RS25640	0.74	-0.9
5,726,258	-		PFLU_RS25640	0.74	-1.6
5,726,258	-		PFLU_RS25640	0.74	-2.3
5,726,258	-		PFLU_RS25640	0.74	-2.3
5,726,258	-		PFLU_RS25640	0.74	-0.6
5,726,258	-		PFLU_RS25640	0.74	-1.0
5,726,258	-		PFLU_RS25640	0.74	-2.4
5,726,258	-		PFLU_RS25640	0.74	-1.5
5,726,258	-		PFLU_RS25640	0.74	+1.4
5,726,381	+		PFLU_RS25640	0.86	-3.1
5,726,382	-		PFLU_RS25640	0.86	+0.8
5,726,509	+				+0.1
5,726,509	+				-2.0
5,726,512	+				-1.3
5,726,513	-				-1.1
5,726,533	+				-1.5
5,726,533	+				-0.6
5,726,533	+				+0.0
5,726,533	+				-0.0
5,726,533	+				-0.5
5,726,533	+				+2.6
5,726,533	+				+1.7
5,726,533	+				-0.0
5,726,533	+				-2.3
5,726,533	+				-2.5
5,726,533	+				-2.4
5,726,533	+				-2.0
5,726,533	+				+2.2
5,726,533	+				+1.4
5,726,533	+				+0.4
5,726,533	+				+2.5
5,726,534	-				-1.6
5,726,534	-				+0.2
5,726,534	-				-1.7
5,726,534	-				-1.1
5,726,534	-				-0.2
5,726,534	-				+3.0
5,726,534	-				-1.3
5,726,534	-				+3.5
5,726,534	-				-0.5
5,726,534	-				-1.2
5,726,534	-				+1.7
5,726,534	-				+1.0
5,726,534	-				-1.0
5,726,534	-				-0.9
5,726,534	-				-1.7
5,726,534	-				-2.0
5,726,534	-				-1.1
5,726,534	-				-1.0
5,726,534	-				+3.1
5,726,534	-				+0.4
5,726,534	-				-1.8
5,726,534	-				+0.3
5,726,534	-				-0.4
5,726,534	-				+0.0
5,726,534	-				-2.3
5,726,534	-				-1.7
5,726,534	-				-0.1
5,726,534	-				-0.0
5,726,534	-				-1.1
5,726,534	-				-1.5
5,726,535	+				-1.6
5,726,535	+				+1.0
5,726,535	+				+4.0
5,726,535	+				-1.2
5,726,535	+				-0.4
5,726,535	+				-0.6
5,726,535	+				+1.9
5,726,535	+				+0.4
5,726,535	+				+0.0
5,726,535	+				-0.1
5,726,535	+				+0.3
5,726,535	+				-0.4
5,726,535	+				-0.4
5,726,535	+				-0.0
5,726,535	+				+1.0
5,726,535	+				-0.7
5,726,535	+				+1.5
5,726,535	+				-2.1
5,726,535	+				+0.1
5,726,535	+				+2.1
5,726,535	+				-0.8
5,726,535	+				+2.8
5,726,535	+				-2.1
5,726,535	+				-1.0
5,726,535	+				-0.4
5,726,535	+				-0.5
5,726,535	+				+4.1
5,726,535	+				+0.4
5,726,535	+				-0.4
5,726,535	+				+1.9
5,726,535	+				+0.8
5,726,535	+				-1.0
5,726,535	+				-2.6
5,726,535	+				+0.8
5,726,535	+				-1.4
5,726,535	+				+0.5
5,726,535	+				+1.0
5,726,536	-				-0.3
5,726,536	-				-2.6
5,726,536	-				+0.4
5,726,536	-				-0.6
5,726,536	-				-1.1
5,726,536	-				+2.9
5,726,536	-				+2.3
5,726,536	-				+3.5
5,726,536	-				-0.2
5,726,536	-				+0.7
5,726,536	-				+2.6
5,726,536	-				-2.6
5,726,536	-				+1.8
5,726,536	-				+1.7
5,726,536	-				+1.7
5,726,536	-				-2.8
5,726,536	-				+2.6
5,726,536	-				-2.9
5,726,536	-				+1.1
5,726,536	-				+2.3
5,726,536	-				-1.2
5,726,536	-				-1.1
5,726,536	-				+1.1
5,726,536	-				-1.1
5,726,536	-				+0.3
5,726,536	-				+1.3
5,726,536	-				+2.5
5,726,536	-				-2.1
5,726,536	-				+2.5
5,726,536	-				-1.4
5,726,536	-				-1.7
5,726,537	+				-0.1
5,726,537	+				+2.3
5,726,537	+				+0.1
5,726,537	+				-2.4
5,726,537	+				-0.8
5,726,537	+				+0.5
5,726,537	+				-1.0
5,726,537	+				-0.7
5,726,537	+				-2.0
5,726,538	-				+2.6
5,726,538	-				-2.5
5,726,538	-				-2.5
5,726,538	-				+0.8
5,726,538	-				+2.2
5,726,538	-				-1.0
5,726,538	-				-0.7
5,726,538	-				-2.5
5,726,538	-				-0.4
5,726,538	-				-1.6
5,726,549	-				+2.5
5,726,572	-				+2.0
5,726,572	-				-2.2
5,726,582	+				+0.5
5,726,582	+				-0.9
5,726,583	-				-2.0
5,726,583	-				+1.8
5,726,583	-				+0.4
5,726,583	-				-0.9
5,726,583	-				+0.4
5,726,583	-				-0.7
5,726,583	-				+1.3
5,726,583	-				+1.0
5,726,622	-		PFLU_RS25645	0.11	-0.7
5,726,622	-		PFLU_RS25645	0.11	-0.2
5,726,622	-		PFLU_RS25645	0.11	-0.7
5,726,622	-		PFLU_RS25645	0.11	+0.5
5,726,702	-		PFLU_RS25645	0.27	-0.7
5,726,702	-		PFLU_RS25645	0.27	-0.2
5,726,740	-		PFLU_RS25645	0.35	-1.9
5,726,740	-		PFLU_RS25645	0.35	-0.9
5,727,066	-				-1.6
5,727,066	-				+0.4
5,727,066	-				+0.5
5,727,066	-				-1.0
5,727,066	-				-0.9
5,727,066	-				-1.1
5,727,066	-				-1.3
5,727,066	-				-0.0
5,727,070	-				-1.9
5,727,070	-				+0.3
5,727,070	-				-2.0
5,727,070	-				-2.1
5,727,070	-				-1.1
5,727,070	-				-1.0
5,727,070	-				-0.4
5,727,070	-				-0.6
5,727,070	-				-0.6
5,727,070	-				-1.9
5,727,070	-				-1.7
5,727,070	-				-1.7
5,727,070	-				-0.9
5,727,070	-				-1.9
5,727,070	-				+1.0
5,727,102	+				-0.2
5,727,102	+				-0.6