Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13475

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
3,047,930	+				-1.4
3,047,931	-				+1.2
3,047,931	-				-0.4
3,047,934	+				+0.1
3,047,934	+				+3.0
3,047,934	+				+1.5
3,047,934	+				-0.3
3,047,934	+				+3.1
3,047,934	+				+5.3
3,047,935	-				+2.2
3,047,935	-				-0.6
3,047,935	-				+2.2
3,047,935	-				-0.4
3,047,965	+				+3.6
3,047,965	+				+0.5
3,047,965	+				-0.6
3,047,965	+				+0.6
3,047,965	+				-0.3
3,047,965	+				+3.6
3,047,965	+				-0.0
3,047,965	+				+5.0
3,047,965	+				+3.3
3,047,966	-				+0.4
3,047,966	-				+1.7
3,047,966	-				+0.7
3,047,966	-				+1.8
3,047,966	-				+0.4
3,047,966	-				+1.8
3,047,966	-				-1.3
3,047,966	-				-2.3
3,047,966	-				+0.2
3,047,966	-				-1.0
3,047,966	-				+2.9
3,047,966	-				+1.4
3,047,966	-				-0.9
3,047,966	-				+4.5
3,047,966	-				-1.7
3,047,969	+				+3.1
3,047,969	+				-0.2
3,047,969	+				-1.3
3,047,969	+				+2.6
3,047,969	+				+0.6
3,047,969	+				+2.5
3,047,969	+				-0.3
3,047,969	+				+2.5
3,047,969	+				+0.9
3,047,969	+				+1.0
3,047,969	+				-0.7
3,047,970	-				+3.4
3,047,970	-				-1.7
3,047,970	-				+0.1
3,047,970	-				+1.7
3,047,970	-				+0.6
3,048,237	+		PFLU_RS13470	0.35	+3.3
3,048,237	+		PFLU_RS13470	0.35	+2.3
3,048,237	+		PFLU_RS13470	0.35	+0.5
3,048,238	-		PFLU_RS13470	0.35	+1.3
3,048,238	-		PFLU_RS13470	0.35	-0.7
3,048,238	-		PFLU_RS13470	0.35	+2.2
3,048,238	-		PFLU_RS13470	0.35	+0.9
3,048,238	-		PFLU_RS13470	0.35	+2.2
3,048,238	-		PFLU_RS13470	0.35	-1.0
3,048,489	+		PFLU_RS13470	0.86	+1.4
3,048,489	+		PFLU_RS13470	0.86	+2.7
3,048,490	-		PFLU_RS13470	0.87	+0.6
3,048,490	-		PFLU_RS13470	0.87	+2.0
3,048,490	-		PFLU_RS13470	0.87	+0.6
3,048,826	+				-0.7
3,048,826	+				+1.5
3,048,826	+				+2.2
3,048,826	+				+2.3
3,048,826	+				+3.5
3,048,827	-				-2.3
3,048,827	-				-2.8
3,048,827	-				-1.5
3,048,827	-				-0.2
3,048,829	+				+1.3
3,048,950	-				-2.4
3,048,950	-				-3.4
3,049,221	+		PFLU_RS13475	0.15	+0.0
3,049,221	+		PFLU_RS13475	0.15	-1.9
3,049,221	+		PFLU_RS13475	0.15	-0.6
3,049,221	+		PFLU_RS13475	0.15	-2.1
3,049,221	+		PFLU_RS13475	0.15	-1.6
3,049,222	-		PFLU_RS13475	0.15	-1.8
3,049,222	-		PFLU_RS13475	0.15	-1.4
3,049,244	+		PFLU_RS13475	0.17	-1.6
3,049,244	+		PFLU_RS13475	0.17	-2.7
3,049,263	+		PFLU_RS13475	0.17	-2.1
3,049,263	+		PFLU_RS13475	0.17	-2.6
3,049,485	+		PFLU_RS13475	0.29	-0.7
3,049,486	-		PFLU_RS13475	0.29	-2.1
3,049,486	-		PFLU_RS13475	0.29	-1.5
3,049,486	-		PFLU_RS13475	0.29	-1.5
3,049,486	-		PFLU_RS13475	0.29	-2.2
3,049,551	+		PFLU_RS13475	0.32	-1.4
3,049,552	-		PFLU_RS13475	0.32	-1.6
3,049,552	-		PFLU_RS13475	0.32	-2.1
3,049,604	+		PFLU_RS13475	0.35	-2.4
3,049,604	+		PFLU_RS13475	0.35	-2.3
3,049,605	-		PFLU_RS13475	0.35	-2.5
3,049,659	+		PFLU_RS13475	0.37	-1.6
3,049,659	+		PFLU_RS13475	0.37	-1.2
3,049,659	+		PFLU_RS13475	0.37	-2.4
3,049,659	+		PFLU_RS13475	0.37	-2.7
3,049,659	+		PFLU_RS13475	0.37	-2.6
3,049,659	+		PFLU_RS13475	0.37	-0.8
3,049,659	+		PFLU_RS13475	0.37	-1.5
3,049,659	+		PFLU_RS13475	0.37	-0.6
3,049,660	-		PFLU_RS13475	0.37	-2.8
3,049,660	-		PFLU_RS13475	0.37	-2.6
3,049,697	+		PFLU_RS13475	0.39	-1.5
3,049,698	-		PFLU_RS13475	0.39	-0.1
3,049,954	-		PFLU_RS13475	0.52	-0.9
3,049,978	-		PFLU_RS13475	0.53	-2.9
3,050,004	+		PFLU_RS13475	0.55	-1.3
3,050,005	-		PFLU_RS13475	0.55	-0.9
3,050,005	-		PFLU_RS13475	0.55	-2.1
3,050,189	+		PFLU_RS13475	0.64	-2.7
3,050,190	-		PFLU_RS13475	0.64	-2.6
3,050,241	+		PFLU_RS13475	0.67	-1.9
3,050,241	+		PFLU_RS13475	0.67	-2.6
3,050,241	+		PFLU_RS13475	0.67	-1.6
3,050,241	+		PFLU_RS13475	0.67	-2.1
3,050,241	+		PFLU_RS13475	0.67	-1.5
3,050,241	+		PFLU_RS13475	0.67	-1.9
3,050,241	+		PFLU_RS13475	0.67	-2.6
3,050,241	+		PFLU_RS13475	0.67	-0.0
3,050,241	+		PFLU_RS13475	0.67	-0.0
3,050,241	+		PFLU_RS13475	0.67	-3.2
3,050,241	+		PFLU_RS13475	0.67	-1.3
3,050,241	+		PFLU_RS13475	0.67	-2.5
3,050,241	+		PFLU_RS13475	0.67	-0.9
3,050,242	-		PFLU_RS13475	0.67	-3.0
3,050,242	-		PFLU_RS13475	0.67	-0.0
3,050,242	-		PFLU_RS13475	0.67	-2.2
3,050,242	-		PFLU_RS13475	0.67	-0.9
3,050,242	-		PFLU_RS13475	0.67	-3.1
3,050,242	-		PFLU_RS13475	0.67	-1.7
3,050,242	-		PFLU_RS13475	0.67	-2.4
3,050,242	-		PFLU_RS13475	0.67	-2.1
3,050,242	-		PFLU_RS13475	0.67	-1.2
3,050,242	-		PFLU_RS13475	0.67	-1.8
3,050,242	-		PFLU_RS13475	0.67	-2.1
3,050,242	-		PFLU_RS13475	0.67	-2.5
3,050,242	-		PFLU_RS13475	0.67	-1.7
3,050,247	+		PFLU_RS13475	0.67	-2.3
3,050,247	+		PFLU_RS13475	0.67	-2.3
3,050,247	+		PFLU_RS13475	0.67	-1.4
3,050,248	-		PFLU_RS13475	0.67	-1.2
3,050,248	-		PFLU_RS13475	0.67	-1.7
3,050,248	-		PFLU_RS13475	0.67	-1.9
3,050,248	-		PFLU_RS13475	0.67	-1.5
3,050,248	-		PFLU_RS13475	0.67	-1.7
3,050,248	-		PFLU_RS13475	0.67	-1.5
3,050,248	-		PFLU_RS13475	0.67	-1.8
3,050,265	-		PFLU_RS13475	0.68	-2.4
3,050,286	+		PFLU_RS13475	0.69	-1.9
3,050,326	-		PFLU_RS13475	0.71	-3.1
3,050,448	+		PFLU_RS13475	0.77	-0.7
3,050,448	+		PFLU_RS13475	0.77	-1.9
3,050,448	+		PFLU_RS13475	0.77	-2.3
3,050,448	+		PFLU_RS13475	0.77	-3.0
3,050,448	+		PFLU_RS13475	0.77	-1.8
3,050,448	+		PFLU_RS13475	0.77	-0.9
3,050,448	+		PFLU_RS13475	0.77	-1.6
3,050,448	+		PFLU_RS13475	0.77	-1.8
3,050,448	+		PFLU_RS13475	0.77	+1.0
3,050,448	+		PFLU_RS13475	0.77	-0.0
3,050,448	+		PFLU_RS13475	0.77	-0.3
3,050,449	-		PFLU_RS13475	0.77	-2.1
3,050,449	-		PFLU_RS13475	0.77	-2.4
3,050,449	-		PFLU_RS13475	0.77	-2.8
3,050,449	-		PFLU_RS13475	0.77	-1.8
3,050,499	+		PFLU_RS13475	0.80	-2.2
3,050,499	+		PFLU_RS13475	0.80	-1.2
3,050,499	+		PFLU_RS13475	0.80	-0.5
3,050,500	-		PFLU_RS13475	0.80	-2.7
3,050,500	-		PFLU_RS13475	0.80	-2.5
3,050,517	+		PFLU_RS13475	0.81	-0.1
3,050,517	+		PFLU_RS13475	0.81	-1.9
3,050,518	-		PFLU_RS13475	0.81	-2.1
3,050,518	-		PFLU_RS13475	0.81	-0.5
3,050,555	+		PFLU_RS13475	0.82	-1.5
3,050,556	-		PFLU_RS13475	0.83	-1.2
3,050,634	+		PFLU_RS13475	0.86	-2.4
3,050,634	+		PFLU_RS13475	0.86	-2.3
3,050,635	-		PFLU_RS13475	0.86	-2.1
3,050,635	-		PFLU_RS13475	0.86	-1.5
3,050,661	+		PFLU_RS13475	0.88	-2.1
3,050,661	+		PFLU_RS13475	0.88	-2.6
3,050,661	+		PFLU_RS13475	0.88	-2.6
3,050,724	+				-2.4
3,050,724	+				-2.5
3,050,724	+				-1.5
3,050,724	+				-1.2
3,050,724	+				-1.5
3,050,724	+				-1.5
3,050,725	-				-2.1
3,050,725	-				-1.1
3,050,725	-				-2.0
3,050,725	-				-2.9
3,050,725	-				-3.0
3,050,725	-				-0.7
3,050,725	-				-1.6
3,050,726	+				-0.7
3,050,832	+				-1.1
3,050,889	-				-0.9
3,050,901	+				+4.1
3,050,902	-				+2.1
3,050,921	+				+4.6
3,050,921	+				+4.0
3,050,922	-				-0.4
3,050,922	-				-0.4
3,050,922	-				+2.3
3,050,967	+				-1.5
3,050,968	-				-2.0
3,050,968	-				-2.6
3,050,986	+				-1.7
3,051,004	+				-0.1
3,051,005	-				-1.6
3,051,005	-				+2.0
3,051,005	-				-2.9
3,051,048	+				-2.0
3,051,085	+				-2.1
3,051,085	+				-2.4
3,051,085	+				-2.3
3,051,086	-				-0.1
3,051,130	+				-1.1
3,051,131	-				-1.2
3,051,131	-				-1.3
3,051,158	-				-1.8
3,051,172	+				+0.2
3,051,259	-				-1.9
3,051,349	+		PFLU_RS13480	0.12	-2.6
3,051,349	+		PFLU_RS13480	0.12	-1.9
3,051,349	+		PFLU_RS13480	0.12	-2.2
3,051,349	+		PFLU_RS13480	0.12	+1.0
3,051,349	+		PFLU_RS13480	0.12	-0.2
3,051,349	+		PFLU_RS13480	0.12	-1.4
3,051,349	+		PFLU_RS13480	0.12	-0.3
3,051,349	+		PFLU_RS13480	0.12	-1.4
3,051,350	-		PFLU_RS13480	0.12	-1.5
3,051,350	-		PFLU_RS13480	0.12	-1.7
3,051,350	-		PFLU_RS13480	0.12	-2.8
3,051,350	-		PFLU_RS13480	0.12	-3.8
3,051,377	-		PFLU_RS13480	0.13	-0.6
3,051,448	+		PFLU_RS13480	0.15	-2.9
3,051,448	+		PFLU_RS13480	0.15	-1.5
3,051,466	+		PFLU_RS13480	0.16	-1.7
3,051,467	-		PFLU_RS13480	0.16	-1.5
3,051,467	-		PFLU_RS13480	0.16	-2.0
3,051,730	+		PFLU_RS13480	0.24	-1.5
3,051,731	-		PFLU_RS13480	0.24	-2.9
3,051,731	-		PFLU_RS13480	0.24	-1.8
3,051,731	-		PFLU_RS13480	0.24	-2.9
3,051,805	+		PFLU_RS13480	0.26	-0.3
3,051,805	+		PFLU_RS13480	0.26	+0.2
3,051,805	+		PFLU_RS13480	0.26	-0.5
3,051,805	+		PFLU_RS13480	0.26	-0.2
3,051,805	+		PFLU_RS13480	0.26	+2.6
3,051,805	+		PFLU_RS13480	0.26	-1.3
3,051,805	+		PFLU_RS13480	0.26	+2.5
3,051,805	+		PFLU_RS13480	0.26	-2.5
3,051,805	+		PFLU_RS13480	0.26	-1.3
3,051,805	+		PFLU_RS13480	0.26	-3.6
3,051,805	+		PFLU_RS13480	0.26	-2.8
3,051,806	-		PFLU_RS13480	0.26	-1.1
3,051,806	-		PFLU_RS13480	0.26	-1.4
3,051,806	-		PFLU_RS13480	0.26	-2.5
3,051,806	-		PFLU_RS13480	0.26	-1.8
3,051,806	-		PFLU_RS13480	0.26	-1.5
3,051,806	-		PFLU_RS13480	0.26	-2.4
3,051,806	-		PFLU_RS13480	0.26	-2.6
3,051,806	-		PFLU_RS13480	0.26	+0.1
3,051,806	-		PFLU_RS13480	0.26	-1.9
3,051,806	-		PFLU_RS13480	0.26	-1.2
3,051,806	-		PFLU_RS13480	0.26	-1.9