Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07430

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
1,652,907	+		PFLU_RS07425	0.26	-0.9
1,652,908	-		PFLU_RS07425	0.26	-0.5
1,653,013	+		PFLU_RS07425	0.37	+3.6
1,653,013	+		PFLU_RS07425	0.37	-1.0
1,653,013	+		PFLU_RS07425	0.37	-0.2
1,653,014	-		PFLU_RS07425	0.38	+2.4
1,653,014	-		PFLU_RS07425	0.38	-2.0
1,653,014	-		PFLU_RS07425	0.38	-0.2
1,653,185	-		PFLU_RS07425	0.56	+0.5
1,653,185	-		PFLU_RS07425	0.56	+0.3
1,653,253	+		PFLU_RS07425	0.64	-0.1
1,653,254	-		PFLU_RS07425	0.64	-0.9
1,653,254	-		PFLU_RS07425	0.64	-1.7
1,653,254	-		PFLU_RS07425	0.64	-1.8
1,653,254	-		PFLU_RS07425	0.64	-2.1
1,653,254	-		PFLU_RS07425	0.64	-0.8
1,653,394	+		PFLU_RS07425	0.79	-1.5
1,653,394	+		PFLU_RS07425	0.79	+0.1
1,653,394	+		PFLU_RS07425	0.79	+2.7
1,653,394	+		PFLU_RS07425	0.79	+1.1
1,653,395	-		PFLU_RS07425	0.80	+2.4
1,653,395	-		PFLU_RS07425	0.80	+0.2
1,653,395	-		PFLU_RS07425	0.80	+0.2
1,653,395	-		PFLU_RS07425	0.80	-1.2
1,653,395	-		PFLU_RS07425	0.80	-1.3
1,653,395	-		PFLU_RS07425	0.80	+0.7
1,653,395	-		PFLU_RS07425	0.80	+1.3
1,653,395	-		PFLU_RS07425	0.80	-1.3
1,653,395	-		PFLU_RS07425	0.80	+1.4
1,653,395	-		PFLU_RS07425	0.80	+0.6
1,653,409	+		PFLU_RS07425	0.81	+1.8
1,653,409	+		PFLU_RS07425	0.81	+3.6
1,653,409	+		PFLU_RS07425	0.81	+3.5
1,653,409	+		PFLU_RS07425	0.81	+1.3
1,653,409	+		PFLU_RS07425	0.81	-2.3
1,653,409	+		PFLU_RS07425	0.81	-0.6
1,653,409	+		PFLU_RS07425	0.81	+3.4
1,653,409	+		PFLU_RS07425	0.81	+1.5
1,653,409	+		PFLU_RS07425	0.81	+2.4
1,653,409	+		PFLU_RS07425	0.81	-0.0
1,653,409	+		PFLU_RS07425	0.81	-1.0
1,653,410	-		PFLU_RS07425	0.81	-2.4
1,653,410	-		PFLU_RS07425	0.81	+3.8
1,653,410	-		PFLU_RS07425	0.81	-0.1
1,653,410	-		PFLU_RS07425	0.81	+0.6
1,653,410	-		PFLU_RS07425	0.81	+2.3
1,653,472	+		PFLU_RS07425	0.88	-2.6
1,653,472	+		PFLU_RS07425	0.88	-1.4
1,653,472	+		PFLU_RS07425	0.88	+0.6
1,653,472	+		PFLU_RS07425	0.88	+3.8
1,653,473	-		PFLU_RS07425	0.88	-1.5
1,653,473	-		PFLU_RS07425	0.88	-2.4
1,653,473	-		PFLU_RS07425	0.88	+2.2
1,653,473	-		PFLU_RS07425	0.88	-1.6
1,653,473	-		PFLU_RS07425	0.88	+2.1
1,653,482	-		PFLU_RS07425	0.89	+2.3
1,653,587	+				+1.2
1,653,587	+				-0.1
1,653,587	+				-0.5
1,653,587	+				-1.4
1,653,587	+				-2.0
1,653,587	+				-0.3
1,653,588	-				-2.9
1,653,588	-				-0.3
1,653,588	-				+0.4
1,653,588	-				+1.0
1,653,588	-				-0.8
1,653,588	-				-2.6
1,653,588	-				+1.0
1,653,588	-				+3.5
1,653,588	-				-1.0
1,653,635	+				+1.5
1,653,635	+				+2.8
1,653,635	+				-2.7
1,653,635	+				+0.4
1,653,635	+				+0.5
1,653,635	+				+2.6
1,653,635	+				+0.1
1,653,635	+				-1.6
1,653,636	-				-0.2
1,653,636	-				+0.2
1,653,636	-				+1.7
1,653,636	-				-2.7
1,653,636	-				+0.2
1,653,636	-				-0.4
1,653,636	-				-2.8
1,653,636	-				-2.3
1,653,636	-				-0.3
1,653,642	+				-3.0
1,653,656	+				-1.4
1,653,656	+				-1.6
1,653,657	-				+2.2
1,653,657	-				+2.5
1,653,688	+				-1.4
1,653,688	+				+1.8
1,653,688	+				-1.5
1,653,689	-				+0.7
1,653,689	-				-0.7
1,653,689	-				-1.6
1,653,689	-				-1.8
1,653,689	-				+0.7
1,653,689	-				+1.9
1,653,689	-				-1.0
1,653,701	+				+0.9
1,653,702	-				+0.8
1,653,702	-				+0.7
1,653,702	-				+0.4
1,653,702	-				-2.8
1,653,702	-				+0.2
1,653,743	+				-1.7
1,653,743	+				+3.4
1,653,743	+				+0.9
1,653,744	-				+2.2
1,653,744	-				+0.2
1,653,744	-				-0.8
1,653,778	+				-1.4
1,653,778	+				+0.5
1,653,829	+				+0.0
1,654,009	+		PFLU_RS07430	0.12	-2.8
1,654,010	-		PFLU_RS07430	0.12	+0.4
1,654,010	-		PFLU_RS07430	0.12	-1.1
1,654,010	-		PFLU_RS07430	0.12	+0.4
1,654,043	+		PFLU_RS07430	0.16	-1.3
1,654,043	+		PFLU_RS07430	0.16	-2.4
1,654,043	+		PFLU_RS07430	0.16	-1.7
1,654,043	+		PFLU_RS07430	0.16	-0.4
1,654,044	-		PFLU_RS07430	0.16	-2.5
1,654,044	-		PFLU_RS07430	0.16	-2.6
1,654,044	-		PFLU_RS07430	0.16	-1.9
1,654,044	-		PFLU_RS07430	0.16	-1.4
1,654,044	-		PFLU_RS07430	0.16	-2.1
1,654,044	-		PFLU_RS07430	0.16	-0.1
1,654,044	-		PFLU_RS07430	0.16	-0.5
1,654,044	-		PFLU_RS07430	0.16	-2.7
1,654,349	+		PFLU_RS07430	0.51	-1.8
1,654,349	+		PFLU_RS07430	0.51	-2.2
1,654,350	-		PFLU_RS07430	0.51	+2.9
1,654,350	-		PFLU_RS07430	0.51	-2.2
1,654,350	-		PFLU_RS07430	0.51	-2.3
1,654,350	-		PFLU_RS07430	0.51	-0.4
1,654,385	+		PFLU_RS07430	0.55	-2.9
1,654,385	+		PFLU_RS07430	0.55	-0.2
1,654,386	-		PFLU_RS07430	0.55	-1.0
1,654,386	-		PFLU_RS07430	0.55	-1.1
1,654,386	-		PFLU_RS07430	0.55	-2.2
1,654,386	-		PFLU_RS07430	0.55	-1.9
1,654,386	-		PFLU_RS07430	0.55	-2.3
1,654,409	+		PFLU_RS07430	0.58	-1.4
1,654,496	+		PFLU_RS07430	0.68	-1.9
1,654,496	+		PFLU_RS07430	0.68	-1.8
1,654,496	+		PFLU_RS07430	0.68	-1.5
1,654,496	+		PFLU_RS07430	0.68	-2.0
1,654,496	+		PFLU_RS07430	0.68	-1.1
1,654,497	-		PFLU_RS07430	0.68	-1.4
1,654,497	-		PFLU_RS07430	0.68	-0.8
1,654,497	-		PFLU_RS07430	0.68	+0.3
1,654,497	-		PFLU_RS07430	0.68	-0.2
1,654,497	-		PFLU_RS07430	0.68	-1.7
1,654,549	+		PFLU_RS07430	0.74	-2.0
1,654,550	-		PFLU_RS07430	0.74	-0.6
1,654,550	-		PFLU_RS07430	0.74	-2.1
1,654,550	-		PFLU_RS07430	0.74	-0.1
1,654,622	+		PFLU_RS07430	0.82	-1.9
1,654,622	+		PFLU_RS07430	0.82	-1.5
1,654,622	+		PFLU_RS07430	0.82	-1.5
1,654,622	+		PFLU_RS07430	0.82	-0.3
1,654,622	+		PFLU_RS07430	0.82	-1.0
1,654,622	+		PFLU_RS07430	0.82	-0.7
1,654,622	+		PFLU_RS07430	0.82	-2.2
1,654,622	+		PFLU_RS07430	0.82	-0.9
1,654,622	+		PFLU_RS07430	0.82	-1.7
1,654,622	+		PFLU_RS07430	0.82	+0.0
1,654,622	+		PFLU_RS07430	0.82	-2.6
1,654,622	+		PFLU_RS07430	0.82	-2.8
1,654,622	+		PFLU_RS07430	0.82	-1.1
1,654,622	+		PFLU_RS07430	0.82	-2.4
1,654,622	+		PFLU_RS07430	0.82	-2.4
1,654,622	+		PFLU_RS07430	0.82	-0.7
1,654,623	-		PFLU_RS07430	0.82	-0.9
1,654,623	-		PFLU_RS07430	0.82	-1.6
1,654,623	-		PFLU_RS07430	0.82	-1.7
1,654,623	-		PFLU_RS07430	0.82	-2.2
1,654,623	-		PFLU_RS07430	0.82	-2.0
1,654,623	-		PFLU_RS07430	0.82	-2.2
1,654,623	-		PFLU_RS07430	0.82	-0.7
1,654,623	-		PFLU_RS07430	0.82	-1.1
1,654,623	-		PFLU_RS07430	0.82	-1.6
1,654,623	-		PFLU_RS07430	0.82	-0.7
1,654,623	-		PFLU_RS07430	0.82	-2.3
1,654,623	-		PFLU_RS07430	0.82	+2.9
1,654,623	-		PFLU_RS07430	0.82	-1.6
1,654,623	-		PFLU_RS07430	0.82	-0.5
1,654,623	-		PFLU_RS07430	0.82	+0.9
1,654,623	-		PFLU_RS07430	0.82	-2.2
1,654,623	-		PFLU_RS07430	0.82	-2.9
1,654,623	-		PFLU_RS07430	0.82	-2.5
1,654,623	-		PFLU_RS07430	0.82	-1.4
1,654,623	-		PFLU_RS07430	0.82	-1.4
1,654,623	-		PFLU_RS07430	0.82	-1.0
1,654,673	+		PFLU_RS07430	0.88	-1.9
1,654,674	-		PFLU_RS07430	0.88	-1.7
1,654,674	-		PFLU_RS07430	0.88	-2.1
1,654,865	+				-1.6
1,654,865	+				+0.8
1,654,865	+				-1.9
1,654,865	+				-0.7
1,654,865	+				-1.9
1,654,865	+				-2.4
1,654,865	+				+0.1
1,654,865	+				-0.7
1,654,865	+				-1.2
1,654,865	+				-1.6
1,654,865	+				+0.6
1,654,865	+				-0.9
1,654,865	+				-1.0
1,654,865	+				-2.0
1,654,865	+				-1.0
1,654,865	+				-1.7
1,654,865	+				-0.5
1,654,865	+				-1.7
1,654,865	+				+1.6
1,654,865	+				+1.5
1,654,865	+				-0.4
1,654,865	+				-2.1
1,654,865	+				-1.5
1,654,865	+				-1.5
1,654,865	+				-1.5
1,654,865	+				-0.7
1,654,865	+				-2.4
1,654,865	+				-1.5
1,654,865	+				-1.2
1,654,865	+				-1.9
1,654,865	+				-0.2
1,654,865	+				-1.6
1,654,865	+				-1.8
1,654,865	+				-1.7
1,654,865	+				-0.7
1,654,865	+				+0.3
1,654,865	+				-1.9
1,654,865	+				-1.3
1,654,865	+				+0.7
1,654,865	+				-1.1
1,654,865	+				-0.4
1,654,865	+				+0.7
1,654,865	+				+1.3
1,654,866	-				-2.2
1,654,866	-				-1.0
1,654,866	-				-1.5
1,654,866	-				-2.7
1,654,866	-				-1.4
1,654,866	-				-2.4
1,654,866	-				+0.2
1,654,866	-				-1.5
1,654,866	-				-0.4
1,654,866	-				-1.8
1,654,866	-				+0.2
1,654,866	-				-0.7
1,654,866	-				-1.4
1,654,866	-				-2.1
1,654,866	-				-2.3
1,654,866	-				-0.9
1,654,866	-				-1.7
1,654,866	-				-2.2
1,654,866	-				-0.5
1,654,866	-				+0.2
1,654,866	-				-1.3
1,654,866	-				-0.1
1,654,866	-				-0.1
1,654,866	-				-0.7
1,654,866	-				-0.5
1,654,866	-				-0.4
1,654,866	-				-2.0
1,654,866	-				-1.8
1,654,866	-				-2.2
1,654,866	-				-1.6
1,654,866	-				-1.6
1,654,866	-				-1.1
1,654,866	-				-2.4
1,654,866	-				+0.8
1,654,866	-				-0.5
1,654,866	-				-1.9
1,654,866	-				-3.1
1,654,866	-				-0.7
1,654,866	-				-2.1
1,654,866	-				-2.1
1,654,866	-				-1.5
1,654,866	-				-1.3
1,654,896	+				-0.3
1,654,896	+				+5.2
1,654,896	+				+3.4
1,654,896	+				+2.8
1,654,896	+				-0.7
1,654,897	-				-1.7
1,654,897	-				-2.4
1,654,897	-				-2.1
1,654,897	-				-2.3
1,654,897	-				-1.3
1,654,958	+				-1.3
1,654,958	+				-0.1
1,655,018	+				+0.5
1,655,018	+				+0.2
1,655,019	-				-1.4
1,655,019	-				-0.7
1,655,055	+				-3.3
1,655,056	-				-0.5
1,655,060	+				-1.4
1,655,060	+				-0.3
1,655,061	-				-1.7
1,655,080	+		PFLU_RS07435	0.10	-1.3
1,655,080	+		PFLU_RS07435	0.10	-1.3
1,655,080	+		PFLU_RS07435	0.10	-1.6
1,655,081	-		PFLU_RS07435	0.10	-2.1
1,655,081	-		PFLU_RS07435	0.10	-0.9
1,655,081	-		PFLU_RS07435	0.10	-1.7
1,655,109	-		PFLU_RS07435	0.12	-1.3
1,655,109	-		PFLU_RS07435	0.12	-2.6
1,655,160	+		PFLU_RS07435	0.17	-2.1
1,655,160	+		PFLU_RS07435	0.17	-2.4
1,655,160	+		PFLU_RS07435	0.17	-2.6
1,655,160	+		PFLU_RS07435	0.17	-1.6
1,655,161	-		PFLU_RS07435	0.17	-2.3
1,655,161	-		PFLU_RS07435	0.17	-2.6
1,655,161	-		PFLU_RS07435	0.17	-0.7
1,655,217	+		PFLU_RS07435	0.22	-1.1
1,655,217	+		PFLU_RS07435	0.22	-2.6
1,655,217	+		PFLU_RS07435	0.22	-1.3
1,655,217	+		PFLU_RS07435	0.22	-1.8
1,655,217	+		PFLU_RS07435	0.22	+1.4
1,655,218	-		PFLU_RS07435	0.22	-1.0
1,655,267	-		PFLU_RS07435	0.26	-0.2
1,655,267	-		PFLU_RS07435	0.26	-1.0
1,655,332	+		PFLU_RS07435	0.31	+0.2
1,655,332	+		PFLU_RS07435	0.31	-1.3
1,655,333	-		PFLU_RS07435	0.31	-0.8
1,655,428	+		PFLU_RS07435	0.39	-2.5
1,655,428	+		PFLU_RS07435	0.39	+0.2
1,655,428	+		PFLU_RS07435	0.39	-1.6
1,655,428	+		PFLU_RS07435	0.39	-2.4
1,655,428	+		PFLU_RS07435	0.39	+0.6
1,655,429	-		PFLU_RS07435	0.39	-1.8
1,655,429	-		PFLU_RS07435	0.39	-1.4
1,655,429	-		PFLU_RS07435	0.39	-0.8
1,655,509	+		PFLU_RS07435	0.46	-1.6
1,655,509	+		PFLU_RS07435	0.46	-0.2
1,655,510	-		PFLU_RS07435	0.46	+0.2
1,655,542	-		PFLU_RS07435	0.49	-0.9
1,655,542	-		PFLU_RS07435	0.49	-0.7
1,655,569	+		PFLU_RS07435	0.51	-0.8
1,655,569	+		PFLU_RS07435	0.51	-1.6
1,655,569	+		PFLU_RS07435	0.51	-1.3
1,655,569	+		PFLU_RS07435	0.51	-1.4
1,655,569	+		PFLU_RS07435	0.51	-0.5
1,655,569	+		PFLU_RS07435	0.51	-1.9
1,655,569	+		PFLU_RS07435	0.51	-0.5
1,655,570	-		PFLU_RS07435	0.51	-0.4
1,655,570	-		PFLU_RS07435	0.51	-1.5
1,655,629	+		PFLU_RS07435	0.56	-1.7
1,655,629	+		PFLU_RS07435	0.56	-0.4
1,655,629	+		PFLU_RS07435	0.56	-2.5
1,655,629	+		PFLU_RS07435	0.56	+0.7
1,655,630	-		PFLU_RS07435	0.56	-1.2
1,655,632	+		PFLU_RS07435	0.56	-1.1
1,655,632	+		PFLU_RS07435	0.56	-1.6
1,655,632	+		PFLU_RS07435	0.56	-2.2
1,655,632	+		PFLU_RS07435	0.56	-1.5
1,655,632	+		PFLU_RS07435	0.56	-3.1
1,655,633	-		PFLU_RS07435	0.56	-1.2
1,655,633	-		PFLU_RS07435	0.56	-1.4
1,655,633	-		PFLU_RS07435	0.56	-1.7
1,655,633	-		PFLU_RS07435	0.56	-2.3
1,655,633	-		PFLU_RS07435	0.56	-1.0
1,655,633	-		PFLU_RS07435	0.56	-2.6
1,655,633	-		PFLU_RS07435	0.56	-1.2
1,655,633	-		PFLU_RS07435	0.56	-2.2
1,655,633	-		PFLU_RS07435	0.56	-1.6