Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS00615

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
127,136	+		PFLU_RS00605	0.80	-0.2
127,136	+		PFLU_RS00605	0.80	-1.3
127,136	+		PFLU_RS00605	0.80	-1.1
127,137	-		PFLU_RS00605	0.80	+1.1
127,137	-		PFLU_RS00605	0.80	+2.3
127,357	+				-1.1
127,357	+				-2.2
127,357	+				-1.2
127,358	-				-1.5
127,556	+				+2.7
127,556	+				+2.7
127,556	+				+1.3
127,556	+				+0.1
127,556	+				-0.4
127,557	-				+0.8
127,596	+		PFLU_RS00610	0.11	-0.5
127,596	+		PFLU_RS00610	0.11	+3.0
127,597	-		PFLU_RS00610	0.11	+2.2
127,597	-		PFLU_RS00610	0.11	+0.9
127,597	-		PFLU_RS00610	0.11	+0.8
127,597	-		PFLU_RS00610	0.11	-1.5
127,597	-		PFLU_RS00610	0.11	-1.6
127,714	-		PFLU_RS00610	0.37	-1.9
127,714	-		PFLU_RS00610	0.37	-0.5
127,714	-		PFLU_RS00610	0.37	-0.5
127,727	+		PFLU_RS00610	0.40	+0.4
127,727	+		PFLU_RS00610	0.40	+0.0
127,727	+		PFLU_RS00610	0.40	+0.5
127,727	+		PFLU_RS00610	0.40	-2.0
127,728	-		PFLU_RS00610	0.40	+0.5
127,728	-		PFLU_RS00610	0.40	-0.5
127,729	+		PFLU_RS00610	0.40	+3.5
127,729	+		PFLU_RS00610	0.40	+0.3
127,729	+		PFLU_RS00610	0.40	-1.0
127,729	+		PFLU_RS00610	0.40	-2.2
127,729	+		PFLU_RS00610	0.40	+1.4
127,729	+		PFLU_RS00610	0.40	+4.4
127,729	+		PFLU_RS00610	0.40	-1.5
127,729	+		PFLU_RS00610	0.40	-1.0
127,729	+		PFLU_RS00610	0.40	-0.8
127,729	+		PFLU_RS00610	0.40	-1.6
127,729	+		PFLU_RS00610	0.40	-1.2
127,729	+		PFLU_RS00610	0.40	+0.6
127,729	+		PFLU_RS00610	0.40	-0.3
127,729	+		PFLU_RS00610	0.40	-2.1
127,729	+		PFLU_RS00610	0.40	+0.7
127,729	+		PFLU_RS00610	0.40	+0.9
127,730	-		PFLU_RS00610	0.40	+2.8
127,730	-		PFLU_RS00610	0.40	-1.6
127,730	-		PFLU_RS00610	0.40	+2.7
127,730	-		PFLU_RS00610	0.40	-0.9
127,730	-		PFLU_RS00610	0.40	+2.9
127,730	-		PFLU_RS00610	0.40	-2.3
127,730	-		PFLU_RS00610	0.40	-0.7
127,730	-		PFLU_RS00610	0.40	+1.8
127,730	-		PFLU_RS00610	0.40	+1.7
127,730	-		PFLU_RS00610	0.40	+1.5
127,730	-		PFLU_RS00610	0.40	+1.3
127,730	-		PFLU_RS00610	0.40	+2.5
127,730	-		PFLU_RS00610	0.40	+2.1
127,730	-		PFLU_RS00610	0.40	-0.1
127,730	-		PFLU_RS00610	0.40	+0.3
127,730	-		PFLU_RS00610	0.40	+0.9
127,730	-		PFLU_RS00610	0.40	-1.7
127,730	-		PFLU_RS00610	0.40	+0.1
127,730	-		PFLU_RS00610	0.40	-0.7
127,730	-		PFLU_RS00610	0.40	-1.7
127,982	+				-1.4
127,982	+				-0.8
127,982	+				-1.8
127,983	-				-1.7
127,983	-				-2.0
128,015	+				+0.1
128,015	+				-0.7
128,048	+				-0.7
128,049	-				+0.9
128,049	-				-0.7
128,049	-				-2.3
128,180	+				-1.5
128,181	-				+1.3
128,192	-				-0.4
128,218	+				-0.9
128,297	+				-2.0
128,297	+				+1.2
128,297	+				-0.9
128,297	+				-0.7
128,298	-				-1.0
128,298	-				-1.0
128,298	-				-1.5
128,298	-				+3.3
128,461	+		PFLU_RS00615	0.13	-0.5
128,461	+		PFLU_RS00615	0.13	-1.7
128,461	+		PFLU_RS00615	0.13	-1.4
128,462	-		PFLU_RS00615	0.13	-0.3
128,462	-		PFLU_RS00615	0.13	-0.8
128,462	-		PFLU_RS00615	0.13	-1.4
128,462	-		PFLU_RS00615	0.13	-1.0
128,609	+		PFLU_RS00615	0.17	-1.2
128,610	-		PFLU_RS00615	0.17	+1.5
128,625	-		PFLU_RS00615	0.18	-1.3
128,625	-		PFLU_RS00615	0.18	+0.2
128,779	+		PFLU_RS00615	0.22	-1.2
128,793	-		PFLU_RS00615	0.23	+1.0
128,793	-		PFLU_RS00615	0.23	-0.5
128,793	-		PFLU_RS00615	0.23	+1.0
128,793	-		PFLU_RS00615	0.23	+3.9
128,841	-		PFLU_RS00615	0.24	+1.8
128,850	+		PFLU_RS00615	0.25	+0.7
128,850	+		PFLU_RS00615	0.25	-2.5
128,850	+		PFLU_RS00615	0.25	-1.1
128,850	+		PFLU_RS00615	0.25	+0.7
128,851	-		PFLU_RS00615	0.25	-1.6
128,851	-		PFLU_RS00615	0.25	-0.5
128,851	-		PFLU_RS00615	0.25	+2.6
128,851	-		PFLU_RS00615	0.25	-0.8
128,851	-		PFLU_RS00615	0.25	-2.1
128,851	-		PFLU_RS00615	0.25	+0.0
128,861	+		PFLU_RS00615	0.25	-2.2
128,861	+		PFLU_RS00615	0.25	+0.8
128,861	+		PFLU_RS00615	0.25	+0.4
128,861	+		PFLU_RS00615	0.25	-1.7
128,861	+		PFLU_RS00615	0.25	+0.8
128,861	+		PFLU_RS00615	0.25	-1.0
128,861	+		PFLU_RS00615	0.25	-1.6
128,861	+		PFLU_RS00615	0.25	+2.5
128,861	+		PFLU_RS00615	0.25	-0.8
128,861	+		PFLU_RS00615	0.25	+2.4
128,861	+		PFLU_RS00615	0.25	-0.1
128,861	+		PFLU_RS00615	0.25	+1.7
128,861	+		PFLU_RS00615	0.25	+1.0
128,861	+		PFLU_RS00615	0.25	+2.2
128,861	+		PFLU_RS00615	0.25	+2.7
128,862	-		PFLU_RS00615	0.25	-2.6
128,862	-		PFLU_RS00615	0.25	+0.1
128,862	-		PFLU_RS00615	0.25	+0.5
128,862	-		PFLU_RS00615	0.25	-2.6
128,862	-		PFLU_RS00615	0.25	-1.7
128,862	-		PFLU_RS00615	0.25	-0.4
128,862	-		PFLU_RS00615	0.25	-1.8
128,862	-		PFLU_RS00615	0.25	+1.0
128,862	-		PFLU_RS00615	0.25	-1.4
128,862	-		PFLU_RS00615	0.25	+3.2
128,862	-		PFLU_RS00615	0.25	-1.4
128,862	-		PFLU_RS00615	0.25	-0.3
128,862	-		PFLU_RS00615	0.25	+1.9
128,862	-		PFLU_RS00615	0.25	-1.8
128,862	-		PFLU_RS00615	0.25	-1.2
128,862	-		PFLU_RS00615	0.25	+1.4
128,862	-		PFLU_RS00615	0.25	-1.9
128,862	-		PFLU_RS00615	0.25	+2.5
128,909	+		PFLU_RS00615	0.26	-1.6
128,910	-		PFLU_RS00615	0.26	-0.1
128,910	-		PFLU_RS00615	0.26	-2.0
128,910	-		PFLU_RS00615	0.26	+1.7
129,054	+		PFLU_RS00615	0.31	+0.1
129,055	-		PFLU_RS00615	0.31	+0.8
129,055	-		PFLU_RS00615	0.31	-0.7
129,119	-		PFLU_RS00615	0.33	+0.0
129,119	-		PFLU_RS00615	0.33	-1.6
129,127	+		PFLU_RS00615	0.33	+0.4
129,127	+		PFLU_RS00615	0.33	+0.8
129,128	-		PFLU_RS00615	0.33	+0.7
129,128	-		PFLU_RS00615	0.33	-0.4
129,515	-		PFLU_RS00615	0.44	+0.5
129,542	+		PFLU_RS00615	0.45	+2.6
129,542	+		PFLU_RS00615	0.45	+1.6
129,543	-		PFLU_RS00615	0.45	+0.6
129,543	-		PFLU_RS00615	0.45	-0.8
129,543	-		PFLU_RS00615	0.45	+0.5
129,636	+		PFLU_RS00615	0.48	+1.0
129,636	+		PFLU_RS00615	0.48	-0.7
129,637	-		PFLU_RS00615	0.48	+1.9
129,637	-		PFLU_RS00615	0.48	-0.1
129,637	-		PFLU_RS00615	0.48	-2.0
129,637	-		PFLU_RS00615	0.48	+2.5
129,662	+		PFLU_RS00615	0.49	+2.4
129,868	+		PFLU_RS00615	0.55	-0.7
129,868	+		PFLU_RS00615	0.55	-2.3
129,868	+		PFLU_RS00615	0.55	-0.4
129,869	-		PFLU_RS00615	0.55	+1.2
129,872	+		PFLU_RS00615	0.55	-0.4
129,872	+		PFLU_RS00615	0.55	+1.2
129,873	-		PFLU_RS00615	0.55	+2.8
129,873	-		PFLU_RS00615	0.55	-1.5
129,873	-		PFLU_RS00615	0.55	+0.0
129,873	-		PFLU_RS00615	0.55	-1.5
129,873	-		PFLU_RS00615	0.55	+1.6
129,883	+		PFLU_RS00615	0.55	+1.8
129,902	+		PFLU_RS00615	0.56	+1.5
129,902	+		PFLU_RS00615	0.56	-1.5
129,902	+		PFLU_RS00615	0.56	+3.3
129,902	+		PFLU_RS00615	0.56	+2.7
129,902	+		PFLU_RS00615	0.56	+2.0
129,902	+		PFLU_RS00615	0.56	+4.5
129,902	+		PFLU_RS00615	0.56	+2.8
129,902	+		PFLU_RS00615	0.56	+2.7
129,902	+		PFLU_RS00615	0.56	-2.3
129,902	+		PFLU_RS00615	0.56	+1.2
129,902	+		PFLU_RS00615	0.56	+0.6
129,902	+		PFLU_RS00615	0.56	+3.1
129,902	+		PFLU_RS00615	0.56	+0.8
129,903	-		PFLU_RS00615	0.56	-1.2
129,903	-		PFLU_RS00615	0.56	-2.2
129,903	-		PFLU_RS00615	0.56	-0.5
129,903	-		PFLU_RS00615	0.56	-1.4
129,903	-		PFLU_RS00615	0.56	+2.8
129,903	-		PFLU_RS00615	0.56	+1.0
129,903	-		PFLU_RS00615	0.56	+1.3
129,903	-		PFLU_RS00615	0.56	+0.8
129,903	-		PFLU_RS00615	0.56	+0.2
129,903	-		PFLU_RS00615	0.56	+2.9
129,903	-		PFLU_RS00615	0.56	+0.9
129,903	-		PFLU_RS00615	0.56	-0.9
129,903	-		PFLU_RS00615	0.56	+1.0
129,903	-		PFLU_RS00615	0.56	+2.0
130,033	+		PFLU_RS00615	0.60	-2.1
130,033	+		PFLU_RS00615	0.60	-0.8
130,055	+		PFLU_RS00615	0.60	-1.9
130,100	+		PFLU_RS00615	0.62	+0.0
130,100	+		PFLU_RS00615	0.62	+0.2
130,100	+		PFLU_RS00615	0.62	-0.8
130,100	+		PFLU_RS00615	0.62	+0.3
130,100	+		PFLU_RS00615	0.62	-0.3
130,100	+		PFLU_RS00615	0.62	-0.6
130,100	+		PFLU_RS00615	0.62	-1.1
130,100	+		PFLU_RS00615	0.62	+1.8
130,100	+		PFLU_RS00615	0.62	-1.0
130,100	+		PFLU_RS00615	0.62	-0.4
130,100	+		PFLU_RS00615	0.62	-2.1
130,100	+		PFLU_RS00615	0.62	+1.8
130,100	+		PFLU_RS00615	0.62	+1.7
130,101	-		PFLU_RS00615	0.62	-0.5
130,101	-		PFLU_RS00615	0.62	-0.2
130,101	-		PFLU_RS00615	0.62	-0.9
130,101	-		PFLU_RS00615	0.62	-0.7
130,101	-		PFLU_RS00615	0.62	+1.5
130,101	-		PFLU_RS00615	0.62	-1.5
130,101	-		PFLU_RS00615	0.62	+1.4
130,101	-		PFLU_RS00615	0.62	-2.0
130,101	-		PFLU_RS00615	0.62	+2.9
130,101	-		PFLU_RS00615	0.62	+0.3
130,101	-		PFLU_RS00615	0.62	-2.5
130,152	+		PFLU_RS00615	0.63	-0.9
130,152	+		PFLU_RS00615	0.63	+1.8
130,152	+		PFLU_RS00615	0.63	+2.4
130,153	-		PFLU_RS00615	0.63	-1.1
130,153	-		PFLU_RS00615	0.63	-1.3
130,153	-		PFLU_RS00615	0.63	-1.3
130,423	+		PFLU_RS00615	0.71	-2.1
130,423	+		PFLU_RS00615	0.71	-1.7
130,423	+		PFLU_RS00615	0.71	+4.5
130,423	+		PFLU_RS00615	0.71	-2.3
130,424	-		PFLU_RS00615	0.71	-2.0
130,424	-		PFLU_RS00615	0.71	+1.4
130,424	-		PFLU_RS00615	0.71	-0.1
130,424	-		PFLU_RS00615	0.71	+2.7
130,424	-		PFLU_RS00615	0.71	-0.2
130,424	-		PFLU_RS00615	0.71	+0.2
130,424	-		PFLU_RS00615	0.71	+1.5
130,424	-		PFLU_RS00615	0.71	-0.4
130,424	-		PFLU_RS00615	0.71	-1.0
130,424	-		PFLU_RS00615	0.71	-1.2
130,424	-		PFLU_RS00615	0.71	-1.5
130,591	+		PFLU_RS00615	0.76	-2.0
130,592	-		PFLU_RS00615	0.76	-0.2
130,592	-		PFLU_RS00615	0.76	-0.1
130,661	+		PFLU_RS00615	0.78	+1.0
130,662	-		PFLU_RS00615	0.78	+2.1
130,662	-		PFLU_RS00615	0.78	-0.3
130,662	-		PFLU_RS00615	0.78	-0.2
130,662	-		PFLU_RS00615	0.78	-2.0
130,662	-		PFLU_RS00615	0.78	+2.3
130,692	+		PFLU_RS00615	0.79	-1.7
130,692	+		PFLU_RS00615	0.79	-2.3
130,700	+		PFLU_RS00615	0.79	+0.7
130,700	+		PFLU_RS00615	0.79	+2.5
130,701	-		PFLU_RS00615	0.79	-2.7
130,701	-		PFLU_RS00615	0.79	-2.1
130,701	-		PFLU_RS00615	0.79	-0.2
130,701	-		PFLU_RS00615	0.79	+3.5
130,701	-		PFLU_RS00615	0.79	+0.3
130,701	-		PFLU_RS00615	0.79	-1.9
130,701	-		PFLU_RS00615	0.79	+0.5
130,701	-		PFLU_RS00615	0.79	-0.4
130,736	-		PFLU_RS00615	0.80	-0.8
130,814	+		PFLU_RS00615	0.83	-0.3
131,021	+		PFLU_RS00615	0.89	+0.4
131,021	+		PFLU_RS00615	0.89	+1.5
131,021	+		PFLU_RS00615	0.89	+2.6
131,021	+		PFLU_RS00615	0.89	-1.7
131,022	-		PFLU_RS00615	0.89	+1.6
131,165	+				+0.5
131,179	+				-1.3
131,179	+				-1.2
131,180	-				+0.5
131,180	-				+1.6
131,180	-				+0.2
131,261	-				-0.2
131,419	+				-1.8
131,419	+				-0.7
131,419	+				-0.2
131,419	+				+3.7
131,419	+				-1.9
131,419	+				-2.7
131,419	+				-1.8
131,419	+				+2.1
131,420	-				-0.8
131,466	-				+5.7
131,535	+		PFLU_RS00620	0.15	+1.4
131,535	+		PFLU_RS00620	0.15	-0.7
131,536	-		PFLU_RS00620	0.15	-1.5
131,629	+		PFLU_RS00620	0.25	+4.0
131,629	+		PFLU_RS00620	0.25	+2.8
131,629	+		PFLU_RS00620	0.25	-1.3
131,629	+		PFLU_RS00620	0.25	+0.3
131,630	-		PFLU_RS00620	0.25	-1.9
131,698	+		PFLU_RS00620	0.32	+3.6
131,699	-		PFLU_RS00620	0.32	+1.4
131,699	-		PFLU_RS00620	0.32	+2.1
131,699	-		PFLU_RS00620	0.32	-2.8
131,706	+		PFLU_RS00620	0.33	-0.9
131,706	+		PFLU_RS00620	0.33	-0.1
131,706	+		PFLU_RS00620	0.33	+2.2
131,707	-		PFLU_RS00620	0.33	+0.2
131,949	+		PFLU_RS00620	0.59	-2.0
131,949	+		PFLU_RS00620	0.59	+1.6
131,949	+		PFLU_RS00620	0.59	+1.0
131,949	+		PFLU_RS00620	0.59	-2.0
131,949	+		PFLU_RS00620	0.59	+0.7
131,949	+		PFLU_RS00620	0.59	+4.1
131,950	-		PFLU_RS00620	0.59	-0.6
131,950	-		PFLU_RS00620	0.59	-1.9
131,950	-		PFLU_RS00620	0.59	-1.3
131,950	-		PFLU_RS00620	0.59	+2.5
131,950	-		PFLU_RS00620	0.59	-2.2
131,950	-		PFLU_RS00620	0.59	-1.1
131,950	-		PFLU_RS00620	0.59	+0.1
132,004	+		PFLU_RS00620	0.65	-0.8
132,004	+		PFLU_RS00620	0.65	+1.2
132,004	+		PFLU_RS00620	0.65	-1.0
132,004	+		PFLU_RS00620	0.65	+1.7
132,005	-		PFLU_RS00620	0.65	-0.3
132,005	-		PFLU_RS00620	0.65	+2.6
132,126	+		PFLU_RS00620	0.78	+1.5
132,126	+		PFLU_RS00620	0.78	-0.4
132,127	-		PFLU_RS00620	0.78	+0.1
132,127	-		PFLU_RS00620	0.78	+3.2
132,143	+		PFLU_RS00620	0.79	+0.3
132,143	+		PFLU_RS00620	0.79	-0.0
132,144	-		PFLU_RS00620	0.79	+1.0
132,144	-		PFLU_RS00620	0.79	+1.1
132,146	-		PFLU_RS00620	0.80	-0.3
132,210	+		PFLU_RS00620	0.86	-0.9
132,210	+		PFLU_RS00620	0.86	-0.1
132,211	-		PFLU_RS00620	0.86	+4.2
132,211	-		PFLU_RS00620	0.86	+1.2
132,235	+		PFLU_RS00620	0.89	-1.9
132,235	+		PFLU_RS00620	0.89	-1.0
132,235	+		PFLU_RS00620	0.89	+0.4
132,235	+		PFLU_RS00620	0.89	-2.7
132,235	+		PFLU_RS00620	0.89	-0.5
132,235	+		PFLU_RS00620	0.89	-0.7
132,235	+		PFLU_RS00620	0.89	+2.0
132,235	+		PFLU_RS00620	0.89	+1.3
132,236	-		PFLU_RS00620	0.89	+0.5
132,236	-		PFLU_RS00620	0.89	+3.5
132,236	-		PFLU_RS00620	0.89	+2.7
132,236	-		PFLU_RS00620	0.89	-1.5
132,236	-		PFLU_RS00620	0.89	+2.4
132,236	-		PFLU_RS00620	0.89	+2.2
132,236	-		PFLU_RS00620	0.89	+1.0
132,236	-		PFLU_RS00620	0.89	-1.0
132,333	-				-1.0