Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09570

Experiment: nitrogen source nitrite 0.5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 0.5mM
2,031,497	+		ABZR87_RS09560	0.88	-1.9
2,031,497	+		ABZR87_RS09560	0.88	+0.1
2,031,498	-		ABZR87_RS09560	0.88	+0.0
2,031,596	+				+1.6
2,031,596	+				-2.6
2,031,596	+				-2.7
2,031,596	+				+0.6
2,031,597	-				+0.6
2,031,597	-				+0.4
2,031,599	+				-3.5
2,031,599	+				+0.6
2,031,600	-				+1.5
2,031,655	-				-0.7
2,031,673	+				+0.8
2,031,674	-				-0.2
2,031,674	-				-0.8
2,031,679	-				+0.0
2,031,679	-				+0.4
2,031,693	+				+1.2
2,031,693	+				-0.1
2,031,700	-				+1.7
2,031,723	-				-0.1
2,031,724	+				+1.1
2,031,724	+				-0.2
2,031,724	+				+0.4
2,031,725	-				-0.7
2,031,767	-				-1.7
2,031,786	+				-2.3
2,031,786	+				+0.3
2,031,787	-				-0.5
2,031,787	-				-2.9
2,031,949	+		ABZR87_RS09565	0.36	-3.7
2,031,949	+		ABZR87_RS09565	0.36	+1.2
2,031,950	-		ABZR87_RS09565	0.36	+0.5
2,031,950	-		ABZR87_RS09565	0.36	-1.1
2,031,952	+		ABZR87_RS09565	0.36	+0.7
2,031,952	+		ABZR87_RS09565	0.36	-0.9
2,031,952	+		ABZR87_RS09565	0.36	-0.4
2,031,952	+		ABZR87_RS09565	0.36	+1.9
2,031,953	-		ABZR87_RS09565	0.36	+0.2
2,032,111	+		ABZR87_RS09565	0.68	+0.3
2,032,112	-		ABZR87_RS09565	0.68	-0.5
2,032,112	-		ABZR87_RS09565	0.68	+1.1
2,032,112	-		ABZR87_RS09565	0.68	-0.5
2,032,147	+		ABZR87_RS09565	0.75	+2.1
2,032,207	+		ABZR87_RS09565	0.87	+0.4
2,032,207	+		ABZR87_RS09565	0.87	+0.4
2,032,207	+		ABZR87_RS09565	0.87	+4.0
2,032,207	+		ABZR87_RS09565	0.87	+1.3
2,032,208	-		ABZR87_RS09565	0.88	-0.6
2,032,208	-		ABZR87_RS09565	0.88	+0.1
2,032,208	-		ABZR87_RS09565	0.88	+0.8
2,032,208	-		ABZR87_RS09565	0.88	-3.0
2,032,208	-		ABZR87_RS09565	0.88	+0.0
2,032,208	-		ABZR87_RS09565	0.88	-1.0
2,032,272	+				+2.0
2,032,272	+				+0.4
2,032,272	+				-0.4
2,032,272	+				-1.4
2,032,272	+				+0.9
2,032,272	+				+1.1
2,032,272	+				+0.8
2,032,273	-				+1.3
2,032,273	-				-1.8
2,032,273	-				+0.8
2,032,273	-				+0.9
2,032,273	-				-2.1
2,032,273	-				-0.5
2,032,273	-				-1.1
2,032,331	+				+2.6
2,032,331	+				-0.2
2,032,331	+				-2.0
2,032,331	+				-2.2
2,032,353	+				+0.5
2,032,353	+				-2.5
2,032,354	-				-1.8
2,032,428	+				+2.2
2,032,429	-				-0.5
2,032,429	-				+0.6
2,032,483	-				+0.1
2,032,575	+		ABZR87_RS09570	0.11	+0.6
2,032,760	-		ABZR87_RS09570	0.23	+0.2
2,032,931	-		ABZR87_RS09570	0.33	+0.6
2,032,987	+		ABZR87_RS09570	0.37	-0.3
2,032,987	+		ABZR87_RS09570	0.37	-1.6
2,032,987	+		ABZR87_RS09570	0.37	-0.6
2,032,988	-		ABZR87_RS09570	0.37	-1.0
2,032,988	-		ABZR87_RS09570	0.37	-2.3
2,033,092	+		ABZR87_RS09570	0.43	-0.9
2,033,110	+		ABZR87_RS09570	0.44	-3.3
2,033,111	-		ABZR87_RS09570	0.44	-1.0
2,033,236	+		ABZR87_RS09570	0.52	-2.0
2,033,237	-		ABZR87_RS09570	0.52	+1.1
2,033,237	-		ABZR87_RS09570	0.52	+0.7
2,033,237	-		ABZR87_RS09570	0.52	-2.1
2,033,294	-		ABZR87_RS09570	0.56	-0.2
2,033,294	-		ABZR87_RS09570	0.56	+0.9
2,033,336	-		ABZR87_RS09570	0.58	-3.5
2,033,350	+		ABZR87_RS09570	0.59	+0.3
2,033,392	+		ABZR87_RS09570	0.62	-0.5
2,033,393	-		ABZR87_RS09570	0.62	-0.9
2,033,393	-		ABZR87_RS09570	0.62	-0.4
2,033,393	-		ABZR87_RS09570	0.62	+1.0
2,033,582	-		ABZR87_RS09570	0.73	-2.4
2,033,708	-		ABZR87_RS09570	0.81	+0.5
2,033,722	+		ABZR87_RS09570	0.82	-0.2
2,033,722	+		ABZR87_RS09570	0.82	+1.3
2,033,722	+		ABZR87_RS09570	0.82	+0.5
2,033,722	+		ABZR87_RS09570	0.82	-0.3
2,033,722	+		ABZR87_RS09570	0.82	-2.8
2,033,722	+		ABZR87_RS09570	0.82	-1.9
2,033,722	+		ABZR87_RS09570	0.82	-0.2
2,033,722	+		ABZR87_RS09570	0.82	-0.9
2,033,722	+		ABZR87_RS09570	0.82	-0.4
2,033,722	+		ABZR87_RS09570	0.82	+0.3
2,033,722	+		ABZR87_RS09570	0.82	+0.9
2,033,722	+		ABZR87_RS09570	0.82	-1.6
2,033,723	-		ABZR87_RS09570	0.82	-0.8
2,033,723	-		ABZR87_RS09570	0.82	-3.3
2,033,723	-		ABZR87_RS09570	0.82	+1.1
2,033,723	-		ABZR87_RS09570	0.82	-0.0
2,033,723	-		ABZR87_RS09570	0.82	-0.1
2,033,723	-		ABZR87_RS09570	0.82	+2.1
2,033,725	+		ABZR87_RS09570	0.82	-0.5
2,033,725	+		ABZR87_RS09570	0.82	-0.4
2,033,726	-		ABZR87_RS09570	0.82	+1.1
2,033,726	-		ABZR87_RS09570	0.82	+0.3
2,033,726	-		ABZR87_RS09570	0.82	+0.0
2,033,726	-		ABZR87_RS09570	0.82	-2.9
2,033,726	-		ABZR87_RS09570	0.82	-3.4
2,033,848	+		ABZR87_RS09570	0.90	-0.2
2,033,849	-		ABZR87_RS09570	0.90	+0.2
2,033,905	+				+1.4
2,033,905	+				-0.6
2,033,906	-				-3.1
2,033,906	-				+0.7
2,033,908	+				+1.0
2,033,908	+				-3.4
2,033,951	+				+1.6
2,033,951	+				+0.4
2,033,951	+				+0.1
2,033,951	+				-1.7
2,033,952	-				-1.8
2,033,952	-				-4.1
2,034,049	+				-4.5
2,034,049	+				+1.9
2,034,050	-				+0.8
2,034,050	-				+0.4
2,034,094	+				-0.5
2,034,095	-				-1.9
2,034,330	-		ABZR87_RS09575	0.21	+0.2
2,034,357	-		ABZR87_RS09575	0.23	-3.3
2,034,357	-		ABZR87_RS09575	0.23	-0.3
2,034,357	-		ABZR87_RS09575	0.23	+1.5
2,034,357	-		ABZR87_RS09575	0.23	+0.3
2,034,383	+		ABZR87_RS09575	0.26	+1.1
2,034,383	+		ABZR87_RS09575	0.26	-0.7
2,034,383	+		ABZR87_RS09575	0.26	-0.8
2,034,383	+		ABZR87_RS09575	0.26	+0.2
2,034,383	+		ABZR87_RS09575	0.26	+0.1
2,034,384	-		ABZR87_RS09575	0.26	+0.9
2,034,384	-		ABZR87_RS09575	0.26	+1.2
2,034,384	-		ABZR87_RS09575	0.26	-0.3
2,034,384	-		ABZR87_RS09575	0.26	+1.1
2,034,479	+		ABZR87_RS09575	0.34	-1.1
2,034,480	-		ABZR87_RS09575	0.34	+1.1
2,034,480	-		ABZR87_RS09575	0.34	-0.4
2,034,480	-		ABZR87_RS09575	0.34	-2.8
2,034,507	+		ABZR87_RS09575	0.37	+0.1
2,034,521	+		ABZR87_RS09575	0.38	+0.9
2,034,521	+		ABZR87_RS09575	0.38	+2.1
2,034,522	-		ABZR87_RS09575	0.38	-3.7
2,034,522	-		ABZR87_RS09575	0.38	+2.0
2,034,881	+		ABZR87_RS09575	0.70	-0.9
2,034,882	+		ABZR87_RS09575	0.70	+0.2
2,034,882	-		ABZR87_RS09575	0.70	-0.2
2,034,890	+		ABZR87_RS09575	0.71	-2.5
2,034,891	-		ABZR87_RS09575	0.71	-2.5
2,034,891	-		ABZR87_RS09575	0.71	+0.3
2,034,891	-		ABZR87_RS09575	0.71	-0.7
2,034,891	-		ABZR87_RS09575	0.71	+0.5
2,034,891	-		ABZR87_RS09575	0.71	+0.6