Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07275

Experiment: nitrogen source nitrite 0.5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 0.5mM
1,540,373	-				+0.5
1,540,518	+		ABZR87_RS07270	0.22	+0.4
1,540,518	+		ABZR87_RS07270	0.22	-0.7
1,540,518	+		ABZR87_RS07270	0.22	+0.6
1,540,518	+		ABZR87_RS07270	0.22	+0.0
1,540,518	+		ABZR87_RS07270	0.22	-3.5
1,540,518	+		ABZR87_RS07270	0.22	-0.3
1,540,518	+		ABZR87_RS07270	0.22	+0.6
1,540,519	-		ABZR87_RS07270	0.22	-0.5
1,540,519	-		ABZR87_RS07270	0.22	-4.9
1,540,519	-		ABZR87_RS07270	0.22	+1.1
1,540,519	-		ABZR87_RS07270	0.22	+1.3
1,540,519	-		ABZR87_RS07270	0.22	+0.2
1,540,519	-		ABZR87_RS07270	0.22	+2.4
1,540,543	+		ABZR87_RS07270	0.26	-2.2
1,540,544	-		ABZR87_RS07270	0.26	-3.2
1,540,707	+		ABZR87_RS07270	0.55	-0.5
1,540,707	+		ABZR87_RS07270	0.55	-0.9
1,540,708	-		ABZR87_RS07270	0.55	+1.0
1,540,738	+		ABZR87_RS07270	0.60	-0.5
1,540,738	+		ABZR87_RS07270	0.60	+0.3
1,540,738	+		ABZR87_RS07270	0.60	+0.1
1,540,785	+		ABZR87_RS07270	0.68	-0.1
1,540,785	+		ABZR87_RS07270	0.68	-0.1
1,540,785	+		ABZR87_RS07270	0.68	-0.6
1,540,785	+		ABZR87_RS07270	0.68	+0.0
1,540,785	+		ABZR87_RS07270	0.68	-1.7
1,540,785	+		ABZR87_RS07270	0.68	+0.6
1,540,785	+		ABZR87_RS07270	0.68	-0.1
1,540,785	+		ABZR87_RS07270	0.68	+0.7
1,540,785	+		ABZR87_RS07270	0.68	+0.2
1,540,786	-		ABZR87_RS07270	0.68	+1.9
1,540,786	-		ABZR87_RS07270	0.68	-0.8
1,540,786	-		ABZR87_RS07270	0.68	+1.2
1,540,786	-		ABZR87_RS07270	0.68	-0.1
1,540,786	-		ABZR87_RS07270	0.68	-0.4
1,540,786	-		ABZR87_RS07270	0.68	+1.4
1,540,786	-		ABZR87_RS07270	0.68	+1.3
1,540,786	-		ABZR87_RS07270	0.68	+1.6
1,540,786	-		ABZR87_RS07270	0.68	+1.6
1,540,786	-		ABZR87_RS07270	0.68	-4.1
1,540,786	-		ABZR87_RS07270	0.68	-3.5
1,540,786	-		ABZR87_RS07270	0.68	-0.4
1,540,786	-		ABZR87_RS07270	0.68	+0.6
1,540,786	-		ABZR87_RS07270	0.68	-0.3
1,540,786	-		ABZR87_RS07270	0.68	-0.8
1,540,786	-		ABZR87_RS07270	0.68	+0.7
1,540,786	-		ABZR87_RS07270	0.68	+0.4
1,540,789	+		ABZR87_RS07270	0.69	+2.0
1,540,789	+		ABZR87_RS07270	0.69	-0.7
1,540,789	+		ABZR87_RS07270	0.69	-1.7
1,540,789	+		ABZR87_RS07270	0.69	-0.0
1,540,789	+		ABZR87_RS07270	0.69	-0.7
1,540,789	+		ABZR87_RS07270	0.69	+0.3
1,540,789	+		ABZR87_RS07270	0.69	+1.1
1,540,789	+		ABZR87_RS07270	0.69	+0.6
1,540,789	+		ABZR87_RS07270	0.69	-2.0
1,540,789	+		ABZR87_RS07270	0.69	+0.5
1,540,789	+		ABZR87_RS07270	0.69	-1.4
1,540,789	+		ABZR87_RS07270	0.69	+0.4
1,540,790	-		ABZR87_RS07270	0.69	-0.8
1,540,790	-		ABZR87_RS07270	0.69	+0.6
1,540,790	-		ABZR87_RS07270	0.69	+0.8
1,540,790	-		ABZR87_RS07270	0.69	+2.3
1,540,790	-		ABZR87_RS07270	0.69	-1.1
1,540,790	-		ABZR87_RS07270	0.69	-0.1
1,540,790	-		ABZR87_RS07270	0.69	-2.2
1,540,790	-		ABZR87_RS07270	0.69	+0.9
1,540,790	-		ABZR87_RS07270	0.69	+0.6
1,540,790	-		ABZR87_RS07270	0.69	+0.7
1,540,790	-		ABZR87_RS07270	0.69	+1.3
1,540,790	-		ABZR87_RS07270	0.69	+0.6
1,540,792	-		ABZR87_RS07270	0.69	+0.7
1,540,792	-		ABZR87_RS07270	0.69	-2.7
1,540,792	-		ABZR87_RS07270	0.69	+0.7
1,540,792	-		ABZR87_RS07270	0.69	-0.0
1,540,792	-		ABZR87_RS07270	0.69	-2.2
1,540,845	+		ABZR87_RS07270	0.78	+0.5
1,540,846	-		ABZR87_RS07270	0.79	+0.9
1,540,846	-		ABZR87_RS07270	0.79	+0.5
1,540,846	-		ABZR87_RS07270	0.79	+0.6
1,540,856	-		ABZR87_RS07270	0.80	-0.3
1,540,856	-		ABZR87_RS07270	0.80	-2.4
1,541,001	+				+1.6
1,541,002	-				-0.7
1,541,002	-				+1.7
1,541,002	-				-1.7
1,541,002	-				-3.7
1,541,079	+				+0.2
1,541,080	-				+0.2
1,541,080	-				+0.2
1,541,089	+				+1.3
1,541,129	+				-3.1
1,541,130	-				-3.9
1,541,130	-				-0.4
1,541,130	-				+1.5
1,541,130	-				+1.2
1,541,132	-				-0.3
1,541,151	+				+3.4
1,541,152	-				-1.4
1,541,278	+				-1.8
1,541,278	+				-3.0
1,541,279	-				-2.7
1,541,443	+		ABZR87_RS07275	0.25	-1.4
1,541,444	-		ABZR87_RS07275	0.25	-2.9
1,541,480	+		ABZR87_RS07275	0.31	+0.1
1,541,510	+		ABZR87_RS07275	0.37	-1.4
1,541,511	-		ABZR87_RS07275	0.37	-0.9
1,541,529	-		ABZR87_RS07275	0.40	+1.0
1,541,561	+		ABZR87_RS07275	0.45	+0.9
1,541,561	+		ABZR87_RS07275	0.45	-3.5
1,541,561	+		ABZR87_RS07275	0.45	+0.7
1,541,561	+		ABZR87_RS07275	0.45	-0.2
1,541,562	-		ABZR87_RS07275	0.46	-2.8
1,541,562	-		ABZR87_RS07275	0.46	+0.1
1,541,562	-		ABZR87_RS07275	0.46	+3.3
1,541,562	-		ABZR87_RS07275	0.46	-2.5
1,541,562	-		ABZR87_RS07275	0.46	-2.0
1,541,562	-		ABZR87_RS07275	0.46	+0.8
1,541,562	-		ABZR87_RS07275	0.46	-0.2
1,541,562	-		ABZR87_RS07275	0.46	-0.6
1,541,562	-		ABZR87_RS07275	0.46	+0.9
1,541,636	+		ABZR87_RS07275	0.58	-0.1
1,541,636	+		ABZR87_RS07275	0.58	+0.9
1,541,636	+		ABZR87_RS07275	0.58	-0.1
1,541,637	-		ABZR87_RS07275	0.58	-1.9
1,541,637	-		ABZR87_RS07275	0.58	+0.2
1,541,637	-		ABZR87_RS07275	0.58	+0.2
1,541,637	-		ABZR87_RS07275	0.58	-3.0
1,541,637	-		ABZR87_RS07275	0.58	-3.1
1,541,637	-		ABZR87_RS07275	0.58	-0.4
1,541,777	+		ABZR87_RS07275	0.82	+1.2
1,541,777	+		ABZR87_RS07275	0.82	+0.1
1,541,777	+		ABZR87_RS07275	0.82	+1.1
1,541,778	-		ABZR87_RS07275	0.83	-0.4
1,541,778	-		ABZR87_RS07275	0.83	-0.6
1,541,807	+		ABZR87_RS07275	0.88	+1.9
1,541,807	+		ABZR87_RS07275	0.88	+1.0
1,541,807	+		ABZR87_RS07275	0.88	+1.5
1,541,807	+		ABZR87_RS07275	0.88	-0.6
1,541,808	-		ABZR87_RS07275	0.88	+0.7
1,541,808	-		ABZR87_RS07275	0.88	-0.1
1,541,808	-		ABZR87_RS07275	0.88	+1.4
1,541,808	-		ABZR87_RS07275	0.88	+0.3
1,541,808	-		ABZR87_RS07275	0.88	-0.1
1,541,810	+		ABZR87_RS07275	0.88	-4.9
1,541,810	+		ABZR87_RS07275	0.88	-0.5
1,541,810	+		ABZR87_RS07275	0.88	+1.5
1,541,810	+		ABZR87_RS07275	0.88	+0.8
1,541,810	+		ABZR87_RS07275	0.88	+1.1
1,541,810	+		ABZR87_RS07275	0.88	+0.2
1,541,810	+		ABZR87_RS07275	0.88	-0.7
1,541,811	-		ABZR87_RS07275	0.88	+1.2
1,541,811	-		ABZR87_RS07275	0.88	+0.5
1,541,811	-		ABZR87_RS07275	0.88	+1.2
1,541,811	-		ABZR87_RS07275	0.88	+0.7
1,541,811	-		ABZR87_RS07275	0.88	-1.2
1,541,822	+				-1.1
1,541,822	+				+0.6
1,541,837	+				+0.7
1,541,837	+				+0.6
1,541,837	+				-1.3
1,541,837	+				+1.2
1,541,837	+				+0.4
1,541,838	-				+0.9
1,541,838	-				+1.9
1,541,838	-				+1.6
1,541,838	-				+1.3
1,541,838	-				+0.6
1,541,873	+				+1.7
1,541,873	+				+0.3
1,541,873	+				+0.3
1,541,873	+				+1.7
1,541,874	-				+1.2
1,541,975	+				+1.3
1,541,975	+				-0.7
1,541,975	+				+2.1
1,541,994	+				-0.0
1,541,994	+				-0.8
1,541,994	+				-3.2
1,541,995	-				+0.1
1,541,995	-				+1.9
1,541,995	-				+0.3
1,541,995	-				-1.6
1,541,995	-				+1.2
1,542,031	+				-2.7
1,542,031	+				-0.1
1,542,031	+				-2.2
1,542,031	+				-0.2
1,542,031	+				-0.5
1,542,031	+				+0.4
1,542,031	+				-1.3
1,542,032	-				+0.6
1,542,032	-				+0.7
1,542,032	-				+1.9
1,542,032	-				+1.2
1,542,032	-				+0.0
1,542,032	-				+0.6
1,542,075	+				-1.2
1,542,075	+				+0.0
1,542,076	-				-0.3
1,542,076	-				-0.1
1,542,076	-				+0.7
1,542,467	+		ABZR87_RS07280	0.52	+0.3
1,542,467	+		ABZR87_RS07280	0.52	+3.9
1,542,468	-		ABZR87_RS07280	0.52	+1.3
1,542,470	+		ABZR87_RS07280	0.53	-0.3
1,542,470	+		ABZR87_RS07280	0.53	-0.8
1,542,470	+		ABZR87_RS07280	0.53	+1.7
1,542,470	+		ABZR87_RS07280	0.53	-1.0
1,542,470	+		ABZR87_RS07280	0.53	+0.8
1,542,470	+		ABZR87_RS07280	0.53	-3.1
1,542,470	+		ABZR87_RS07280	0.53	+0.9
1,542,470	+		ABZR87_RS07280	0.53	-1.2
1,542,470	+		ABZR87_RS07280	0.53	-1.8
1,542,471	-		ABZR87_RS07280	0.53	+1.3
1,542,471	-		ABZR87_RS07280	0.53	+0.4
1,542,471	-		ABZR87_RS07280	0.53	-2.1
1,542,471	-		ABZR87_RS07280	0.53	+0.7
1,542,471	-		ABZR87_RS07280	0.53	+0.2
1,542,471	-		ABZR87_RS07280	0.53	-0.5
1,542,471	-		ABZR87_RS07280	0.53	+1.1
1,542,471	-		ABZR87_RS07280	0.53	+0.1
1,542,671	+		ABZR87_RS07280	0.77	-4.2
1,542,671	+		ABZR87_RS07280	0.77	+2.0
1,542,671	+		ABZR87_RS07280	0.77	-2.5
1,542,672	-		ABZR87_RS07280	0.77	+1.3
1,542,672	-		ABZR87_RS07280	0.77	-3.0
1,542,672	-		ABZR87_RS07280	0.77	-2.9
1,542,672	-		ABZR87_RS07280	0.77	-0.8
1,542,672	-		ABZR87_RS07280	0.77	+1.4
1,542,672	-		ABZR87_RS07280	0.77	+0.9
1,542,751	+		ABZR87_RS07280	0.86	+0.9
1,542,781	+		ABZR87_RS07280	0.90	-0.5
1,542,781	+		ABZR87_RS07280	0.90	-2.4
1,542,781	+		ABZR87_RS07280	0.90	+1.7
1,542,781	+		ABZR87_RS07280	0.90	-3.4
1,542,781	+		ABZR87_RS07280	0.90	-1.5
1,542,782	-				-1.4
1,542,782	-				+1.4
1,542,782	-				+0.0
1,542,782	-				-2.1
1,542,806	+				+3.6
1,542,806	+				+1.8
1,542,806	+				+2.0
1,542,807	-				-1.1
1,542,807	-				+0.0
1,542,807	-				+0.8
1,542,807	-				+0.6