Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26080

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
5,824,766	+		PFLU_RS26070	0.51	+1.4
5,824,767	-		PFLU_RS26070	0.51	+1.5
5,824,767	-		PFLU_RS26070	0.51	+0.4
5,824,767	-		PFLU_RS26070	0.51	+1.2
5,824,767	-		PFLU_RS26070	0.51	+1.1
5,824,769	+		PFLU_RS26070	0.51	+0.9
5,824,770	-		PFLU_RS26070	0.51	+1.6
5,824,779	+		PFLU_RS26070	0.52	-1.1
5,824,805	+		PFLU_RS26070	0.55	-0.0
5,824,805	+		PFLU_RS26070	0.55	-1.3
5,824,805	+		PFLU_RS26070	0.55	-1.9
5,824,806	-		PFLU_RS26070	0.55	-0.2
5,824,865	+		PFLU_RS26070	0.62	+0.4
5,824,904	+		PFLU_RS26070	0.66	-0.8
5,824,905	-		PFLU_RS26070	0.66	+2.6
5,824,905	-		PFLU_RS26070	0.66	+1.0
5,825,020	+		PFLU_RS26070	0.79	+1.5
5,825,020	+		PFLU_RS26070	0.79	-0.9
5,825,021	-		PFLU_RS26070	0.79	-0.3
5,825,063	+		PFLU_RS26070	0.84	+1.2
5,825,123	+				+0.5
5,825,148	-				+1.3
5,825,156	+				-1.6
5,825,157	-				+1.6
5,825,157	-				+0.8
5,825,157	-				-0.0
5,825,157	-				+3.0
5,825,157	-				+1.7
5,825,178	+				-1.6
5,825,178	+				+2.0
5,825,178	+				+0.8
5,825,233	+				+1.9
5,825,233	+				-1.9
5,825,233	+				+2.3
5,825,233	+				+2.6
5,825,234	-				+0.3
5,825,234	-				+1.7
5,825,234	-				-0.9
5,825,243	+				-0.9
5,825,267	+				-0.7
5,825,278	-				+1.4
5,825,278	-				-0.7
5,825,297	-				+1.2
5,825,312	+				-1.7
5,825,313	-				+0.2
5,825,313	-				+1.6
5,825,319	+				-2.4
5,825,319	+				-1.5
5,825,319	+				+1.0
5,825,319	+				+0.5
5,825,320	-				+1.0
5,825,320	-				-0.4
5,825,320	-				-0.6
5,825,320	-				-1.9
5,825,320	-				+0.8
5,825,320	-				-0.2
5,825,320	-				+2.3
5,825,320	-				+0.6
5,825,320	-				-1.8
5,825,320	-				+0.1
5,825,320	-				+0.1
5,825,320	-				-2.0
5,825,335	+				+2.0
5,825,335	+				-0.7
5,825,336	-				+3.1
5,825,336	-				-1.1
5,825,339	+				+2.1
5,825,339	+				+1.3
5,825,339	+				-1.1
5,825,339	+				-0.3
5,825,339	+				-0.2
5,825,339	+				+1.4
5,825,340	-				+2.2
5,825,340	-				+1.5
5,825,340	-				+0.1
5,825,364	+				+1.7
5,825,364	+				+1.5
5,825,364	+				+3.1
5,825,364	+				+0.2
5,825,365	-				+2.0
5,825,365	-				+1.8
5,825,384	+				+2.6
5,825,384	+				+0.3
5,825,385	-				-1.3
5,825,387	+				+2.7
5,825,388	-				-0.5
5,825,409	-				-1.8
5,825,422	-				-2.7
5,825,422	-				-1.0
5,825,426	-				-1.3
5,825,426	-				+1.5
5,825,445	-				-0.6
5,825,449	+				+2.8
5,825,503	+		PFLU_RS26075	0.12	-1.8
5,825,517	+		PFLU_RS26075	0.16	-0.5
5,825,517	+		PFLU_RS26075	0.16	+1.2
5,825,517	+		PFLU_RS26075	0.16	-1.1
5,825,517	+		PFLU_RS26075	0.16	-2.4
5,825,517	+		PFLU_RS26075	0.16	-2.0
5,825,518	-		PFLU_RS26075	0.17	-0.5
5,825,518	-		PFLU_RS26075	0.17	+0.2
5,825,666	+		PFLU_RS26075	0.60	-1.2
5,825,667	-		PFLU_RS26075	0.60	+1.4
5,825,667	-		PFLU_RS26075	0.60	+1.0
5,825,667	-		PFLU_RS26075	0.60	+2.6
5,825,728	-		PFLU_RS26075	0.78	+0.3
5,825,741	+		PFLU_RS26075	0.82	+0.2
5,825,742	-		PFLU_RS26075	0.82	-0.2
5,825,808	-		PFLU_RS26080	0.16	-1.6
5,825,916	+		PFLU_RS26080	0.44	+0.8
5,825,916	+		PFLU_RS26080	0.44	+1.1
5,825,916	+		PFLU_RS26080	0.44	+2.3
5,825,917	-		PFLU_RS26080	0.44	-3.0
5,825,917	-		PFLU_RS26080	0.44	-1.5
5,825,917	-		PFLU_RS26080	0.44	-0.1
5,825,947	+		PFLU_RS26080	0.52	-1.7
5,825,975	+		PFLU_RS26080	0.59	+0.5
5,825,975	+		PFLU_RS26080	0.59	+1.3
5,825,975	+		PFLU_RS26080	0.59	+1.9
5,825,975	+		PFLU_RS26080	0.59	-1.2
5,825,976	-		PFLU_RS26080	0.59	-1.0
5,825,976	-		PFLU_RS26080	0.59	+1.1
5,825,976	-		PFLU_RS26080	0.59	+1.1
5,825,976	-		PFLU_RS26080	0.59	-0.9
5,825,976	-		PFLU_RS26080	0.59	-0.4
5,825,976	-		PFLU_RS26080	0.59	-1.2
5,826,079	+		PFLU_RS26080	0.86	-1.5
5,826,079	+		PFLU_RS26080	0.86	-0.9
5,826,080	-		PFLU_RS26080	0.86	+1.3
5,826,080	-		PFLU_RS26080	0.86	+2.2
5,826,080	-		PFLU_RS26080	0.86	-0.6
5,826,080	-		PFLU_RS26080	0.86	+0.4
5,826,080	-		PFLU_RS26080	0.86	+0.4
5,826,103	+				-0.8
5,826,103	+				+1.1
5,826,103	+				+0.8
5,826,103	+				-2.6
5,826,103	+				-1.4
5,826,104	-				+1.2
5,826,122	+				-1.2
5,826,122	+				-1.0
5,826,122	+				+1.7
5,826,122	+				+0.8
5,826,122	+				-1.7
5,826,122	+				-0.8
5,826,122	+				+2.8
5,826,122	+				+3.7
5,826,122	+				-1.2
5,826,122	+				-1.6
5,826,122	+				-2.5
5,826,122	+				+1.0
5,826,123	-				+1.2
5,826,123	-				-2.1
5,826,123	-				+0.9
5,826,123	-				+1.8
5,826,123	-				+1.0
5,826,123	-				+0.7
5,826,123	-				+0.1
5,826,123	-				+0.0
5,826,123	-				+0.3
5,826,123	-				-1.5
5,826,123	-				+1.1
5,826,123	-				-0.7
5,826,123	-				-1.0
5,826,123	-				+1.2
5,826,123	-				+0.1
5,826,123	-				-2.2
5,826,123	-				-1.6
5,826,123	-				+1.6
5,826,123	-				+1.9
5,826,132	+				-1.8
5,826,132	+				-0.1
5,826,132	+				+3.0
5,826,133	-				+3.2
5,826,135	+				-1.3
5,826,135	+				-1.4
5,826,135	+				-0.7
5,826,135	+				+1.4
5,826,136	-				-0.8
5,826,136	-				+2.7
5,826,136	-				-0.7
5,826,136	-				+0.5
5,826,144	+				-1.5
5,826,144	+				-0.6
5,826,144	+				-0.6
5,826,144	+				-2.3
5,826,144	+				-0.9
5,826,144	+				-0.3
5,826,144	+				+4.1
5,826,144	+				+0.8
5,826,144	+				-1.9
5,826,144	+				-2.0
5,826,144	+				-0.0
5,826,145	-				+0.6
5,826,145	-				+0.6
5,826,145	-				-1.1
5,826,145	-				+3.0
5,826,145	-				+1.1
5,826,145	-				-1.9
5,826,146	+				+2.5
5,826,146	+				-0.6
5,826,146	+				+0.3
5,826,146	+				-0.5
5,826,146	+				+3.9
5,826,146	+				+0.1
5,826,146	+				+2.1
5,826,146	+				-0.1
5,826,146	+				+1.2
5,826,146	+				-1.4
5,826,146	+				-0.0
5,826,146	+				-1.4
5,826,146	+				+1.8
5,826,146	+				-2.0
5,826,146	+				+1.3
5,826,147	-				-1.1
5,826,147	-				-1.1
5,826,147	-				+0.3
5,826,147	-				-0.2
5,826,147	-				-1.2
5,826,147	-				-0.2
5,826,147	-				-0.5
5,826,147	-				-1.7
5,826,147	-				-1.7
5,826,147	-				-2.0
5,826,147	-				+1.5
5,826,147	-				-0.9
5,826,147	-				+2.1
5,826,147	-				+1.0
5,826,147	-				+0.4
5,826,147	-				+2.0
5,826,147	-				-0.4
5,826,147	-				+2.2
5,826,147	-				+0.5
5,826,147	-				-0.3
5,826,147	-				-1.1
5,826,147	-				-0.6
5,826,147	-				-0.1
5,826,147	-				-1.0
5,826,147	-				+1.2
5,826,147	-				-1.8
5,826,147	-				+0.3
5,826,147	-				-2.1
5,826,147	-				+2.4
5,826,147	-				-2.0
5,826,172	+				-1.5
5,826,406	+		PFLU_RS26085	0.14	-0.3
5,826,406	+		PFLU_RS26085	0.14	-0.7
5,826,406	+		PFLU_RS26085	0.14	+1.7
5,826,406	+		PFLU_RS26085	0.14	-0.4
5,826,406	+		PFLU_RS26085	0.14	-0.4
5,826,406	+		PFLU_RS26085	0.14	+2.2
5,826,406	+		PFLU_RS26085	0.14	+0.2
5,826,406	+		PFLU_RS26085	0.14	+1.4
5,826,406	+		PFLU_RS26085	0.14	+1.0
5,826,407	-		PFLU_RS26085	0.15	+0.3
5,826,407	-		PFLU_RS26085	0.15	+1.3
5,826,407	-		PFLU_RS26085	0.15	+0.4
5,826,407	-		PFLU_RS26085	0.15	+1.0
5,826,407	-		PFLU_RS26085	0.15	+3.1
5,826,407	-		PFLU_RS26085	0.15	-1.8
5,826,410	-		PFLU_RS26085	0.15	-1.7
5,826,438	+		PFLU_RS26085	0.17	+1.6
5,826,438	+		PFLU_RS26085	0.17	-1.0
5,826,438	+		PFLU_RS26085	0.17	+0.5
5,826,439	-		PFLU_RS26085	0.17	-2.7
5,826,439	-		PFLU_RS26085	0.17	-1.4
5,826,439	-		PFLU_RS26085	0.17	-1.9
5,826,439	-		PFLU_RS26085	0.17	+0.3
5,826,468	+		PFLU_RS26085	0.19	+0.7
5,826,468	+		PFLU_RS26085	0.19	+1.8
5,826,468	+		PFLU_RS26085	0.19	+1.0
5,826,468	+		PFLU_RS26085	0.19	+0.2
5,826,469	-		PFLU_RS26085	0.19	-2.1
5,826,469	-		PFLU_RS26085	0.19	+1.6
5,826,469	-		PFLU_RS26085	0.19	-1.3
5,826,469	-		PFLU_RS26085	0.19	-1.1
5,826,611	+		PFLU_RS26085	0.28	-0.0
5,826,611	+		PFLU_RS26085	0.28	-0.5
5,826,611	+		PFLU_RS26085	0.28	+0.9
5,826,611	+		PFLU_RS26085	0.28	-0.9
5,826,612	-		PFLU_RS26085	0.28	+1.3
5,826,785	+		PFLU_RS26085	0.39	+1.7
5,826,840	+		PFLU_RS26085	0.43	-1.2
5,826,841	-		PFLU_RS26085	0.43	+0.1
5,826,922	-		PFLU_RS26085	0.48	-0.5
5,826,945	+		PFLU_RS26085	0.50	-1.1
5,826,986	+		PFLU_RS26085	0.52	-2.0
5,826,986	+		PFLU_RS26085	0.52	+0.3
5,826,986	+		PFLU_RS26085	0.52	-0.8
5,826,986	+		PFLU_RS26085	0.52	-1.2
5,826,986	+		PFLU_RS26085	0.52	+0.7
5,826,987	-		PFLU_RS26085	0.53	-0.2
5,826,987	-		PFLU_RS26085	0.53	-0.6
5,826,998	+		PFLU_RS26085	0.53	+1.0
5,826,998	+		PFLU_RS26085	0.53	-0.9
5,826,999	-		PFLU_RS26085	0.53	+1.3
5,826,999	-		PFLU_RS26085	0.53	-0.3
5,827,000	+		PFLU_RS26085	0.53	-1.1
5,827,001	-		PFLU_RS26085	0.53	-0.4
5,827,001	-		PFLU_RS26085	0.53	-2.6
5,827,037	+		PFLU_RS26085	0.56	-1.0
5,827,037	+		PFLU_RS26085	0.56	-2.4
5,827,037	+		PFLU_RS26085	0.56	-0.6
5,827,037	+		PFLU_RS26085	0.56	-1.6
5,827,037	+		PFLU_RS26085	0.56	+2.0
5,827,038	-		PFLU_RS26085	0.56	+1.8
5,827,076	-		PFLU_RS26085	0.58	+0.1
5,827,076	-		PFLU_RS26085	0.58	-2.5
5,827,127	+		PFLU_RS26085	0.62	-1.5
5,827,127	+		PFLU_RS26085	0.62	+0.4
5,827,127	+		PFLU_RS26085	0.62	+1.2
5,827,128	-		PFLU_RS26085	0.62	+2.6