Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21715

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
4,890,298	+				+3.9
4,890,298	+				+3.8
4,890,299	-				+3.9
4,890,299	-				+3.5
4,890,306	+		PFLU_RS21705	0.10	+3.9
4,890,306	+		PFLU_RS21705	0.10	+4.6
4,890,321	+		PFLU_RS21705	0.16	+4.3
4,890,321	+		PFLU_RS21705	0.16	+4.4
4,890,321	+		PFLU_RS21705	0.16	+3.4
4,890,321	+		PFLU_RS21705	0.16	+4.4
4,890,321	+		PFLU_RS21705	0.16	+4.6
4,890,321	+		PFLU_RS21705	0.16	+5.4
4,890,321	+		PFLU_RS21705	0.16	+4.1
4,890,321	+		PFLU_RS21705	0.16	+2.2
4,890,321	+		PFLU_RS21705	0.16	+4.0
4,890,321	+		PFLU_RS21705	0.16	+4.5
4,890,321	+		PFLU_RS21705	0.16	+1.3
4,890,321	+		PFLU_RS21705	0.16	+3.8
4,890,321	+		PFLU_RS21705	0.16	+4.4
4,890,322	-		PFLU_RS21705	0.16	+3.2
4,890,322	-		PFLU_RS21705	0.16	+3.5
4,890,322	-		PFLU_RS21705	0.16	+1.3
4,890,322	-		PFLU_RS21705	0.16	+3.7
4,890,322	-		PFLU_RS21705	0.16	+4.0
4,890,322	-		PFLU_RS21705	0.16	+4.0
4,890,322	-		PFLU_RS21705	0.16	+3.5
4,890,322	-		PFLU_RS21705	0.16	+2.6
4,890,322	-		PFLU_RS21705	0.16	+3.9
4,890,322	-		PFLU_RS21705	0.16	+3.5
4,890,322	-		PFLU_RS21705	0.16	+4.4
4,890,322	-		PFLU_RS21705	0.16	+4.1
4,890,553	+				+4.4
4,890,553	+				+3.9
4,890,553	+				+4.7
4,890,554	-				+3.7
4,890,554	-				+3.4
4,890,555	+				+3.4
4,890,555	+				+4.3
4,890,556	-				+3.4
4,890,556	-				+4.1
4,890,569	+				+5.0
4,890,569	+				+4.4
4,890,569	+				+4.0
4,890,569	+				+4.6
4,890,570	-				+4.0
4,890,668	+		PFLU_RS21710	0.16	+4.8
4,890,668	+		PFLU_RS21710	0.16	+2.9
4,890,668	+		PFLU_RS21710	0.16	+4.4
4,890,668	+		PFLU_RS21710	0.16	+3.2
4,890,668	+		PFLU_RS21710	0.16	+3.4
4,890,668	+		PFLU_RS21710	0.16	+4.1
4,890,669	-		PFLU_RS21710	0.16	+4.2
4,890,669	-		PFLU_RS21710	0.16	+3.6
4,890,669	-		PFLU_RS21710	0.16	+3.8
4,890,669	-		PFLU_RS21710	0.16	+3.7
4,890,722	+		PFLU_RS21710	0.23	+4.5
4,890,722	+		PFLU_RS21710	0.23	+4.2
4,890,946	+		PFLU_RS21710	0.53	+4.2
4,890,947	-		PFLU_RS21710	0.53	+3.9
4,890,947	-		PFLU_RS21710	0.53	+4.1
4,890,947	-		PFLU_RS21710	0.53	+3.2
4,890,947	-		PFLU_RS21710	0.53	+4.8
4,891,180	+		PFLU_RS21710	0.84	+4.0
4,891,181	-		PFLU_RS21710	0.85	+4.0
4,891,214	+		PFLU_RS21710	0.89	+3.3
4,891,215	-		PFLU_RS21710	0.89	+4.1
4,891,215	-		PFLU_RS21710	0.89	+2.6
4,891,215	-		PFLU_RS21710	0.89	+4.3
4,891,215	-		PFLU_RS21710	0.89	+4.9
4,891,284	+				+4.2
4,891,284	+				+2.7
4,891,285	-				+4.3
4,891,296	+				+3.8
4,891,296	+				+2.9
4,891,296	+				+2.8
4,891,296	+				+2.6
4,891,296	+				+0.7
4,891,296	+				+4.1
4,891,296	+				+3.9
4,891,296	+				+2.3
4,891,296	+				+3.7
4,891,296	+				+2.5
4,891,296	+				+2.9
4,891,296	+				+2.8
4,891,297	-				+4.0
4,891,297	-				+4.2
4,891,297	-				+5.7
4,891,297	-				+4.6
4,891,297	-				+2.9
4,891,297	-				+4.7
4,891,303	+				+3.6
4,891,303	+				+4.7
4,891,303	+				+4.4
4,891,303	+				+2.9
4,891,303	+				+4.2
4,891,304	-				+3.6
4,891,304	-				+3.9
4,891,304	-				+4.6
4,891,304	-				+3.9
4,891,706	+				+2.3
4,891,707	-				+2.6
4,891,732	+				+3.8
4,891,732	+				+3.9
4,892,103	-		PFLU_RS21720	0.79	+1.8
4,892,202	+				+4.1
4,892,202	+				+3.5
4,892,202	+				+2.7
4,892,202	+				+3.6
4,892,202	+				+3.8
4,892,202	+				+3.7
4,892,202	+				+3.3
4,892,202	+				+3.9
4,892,202	+				+3.4
4,892,202	+				+3.3
4,892,202	+				+3.2
4,892,202	+				+3.9
4,892,202	+				+2.3
4,892,202	+				+3.6
4,892,202	+				+3.2
4,892,202	+				+4.1
4,892,202	+				+2.0
4,892,202	+				+3.8
4,892,202	+				+3.7
4,892,202	+				+3.3
4,892,202	+				+3.5
4,892,202	+				+3.6
4,892,202	+				+4.2
4,892,202	+				+3.8
4,892,202	+				+4.1
4,892,202	+				+3.4
4,892,202	+				+4.3
4,892,202	+				+3.8
4,892,202	+				+3.9
4,892,202	+				+4.2
4,892,202	+				+4.0
4,892,202	+				+4.3
4,892,202	+				+2.2
4,892,202	+				+3.6
4,892,202	+				+4.3
4,892,202	+				+3.6
4,892,202	+				+3.0
4,892,202	+				+3.5
4,892,202	+				+1.8
4,892,202	+				+2.9
4,892,202	+				+3.8
4,892,202	+				+4.4
4,892,203	-				+3.2
4,892,203	-				+3.2
4,892,203	-				+3.5
4,892,203	-				+4.1
4,892,203	-				+3.9
4,892,203	-				+2.5
4,892,203	-				+4.7
4,892,203	-				+3.8
4,892,203	-				+3.3
4,892,203	-				+3.5
4,892,203	-				+3.9
4,892,203	-				+3.9
4,892,203	-				+3.3
4,892,203	-				+3.6
4,892,203	-				+3.2
4,892,203	-				+3.0
4,892,203	-				+3.8
4,892,203	-				+4.6
4,892,203	-				+2.9
4,892,203	-				+3.3
4,892,203	-				+0.9
4,892,203	-				+3.4
4,892,203	-				+3.4
4,892,203	-				+3.8
4,892,203	-				+3.5
4,892,203	-				+3.2
4,892,203	-				+2.5
4,892,203	-				+2.3
4,892,203	-				+3.7
4,892,203	-				+3.3
4,892,203	-				+2.7
4,892,203	-				+3.6
4,892,203	-				+3.6
4,892,203	-				+3.9
4,892,203	-				+3.6
4,892,203	-				+3.1
4,892,203	-				+4.2
4,892,203	-				+2.0
4,892,203	-				+2.7
4,892,203	-				+4.4
4,892,203	-				+4.0
4,892,230	+				+3.7
4,892,230	+				+3.4
4,892,230	+				+3.8
4,892,230	+				+1.7
4,892,230	+				+3.8
4,892,230	+				+4.1
4,892,230	+				+3.6
4,892,230	+				+3.6
4,892,230	+				+3.1
4,892,230	+				+3.8
4,892,230	+				+3.8
4,892,230	+				+4.4
4,892,231	-				+0.5
4,892,231	-				+0.4
4,892,231	-				+0.1
4,892,231	-				-0.2
4,892,231	-				+2.2
4,892,231	-				-1.2
4,892,231	-				+3.0
4,892,231	-				+0.3
4,892,231	-				-2.5
4,892,231	-				+0.9
4,892,231	-				+2.5
4,892,231	-				-2.1
4,892,231	-				+0.3
4,892,231	-				+4.1
4,892,231	-				-1.4
4,892,231	-				-0.9
4,892,231	-				-2.7
4,892,234	+				+3.1
4,892,234	+				+4.7
4,892,234	+				+4.0
4,892,234	+				+4.8
4,892,234	+				+4.8
4,892,234	+				+4.9
4,892,234	+				+3.7
4,892,235	-				-0.8
4,892,235	-				-1.4
4,892,235	-				+1.2
4,892,235	-				+0.8
4,892,235	-				+2.4
4,892,694	+		PFLU_RS21725	0.45	+4.2
4,892,694	+		PFLU_RS21725	0.45	+3.6
4,892,695	-		PFLU_RS21725	0.45	+3.7
4,892,695	-		PFLU_RS21725	0.45	+3.6
4,892,695	-		PFLU_RS21725	0.45	+3.5
4,892,695	-		PFLU_RS21725	0.45	+4.0
4,892,695	-		PFLU_RS21725	0.45	+3.7
4,892,695	-		PFLU_RS21725	0.45	+4.8