Experiment: KB with Sinomenine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0540 and Psyr_0541 are separated by 48 nucleotides Psyr_0541 and Psyr_0542 are separated by 204 nucleotides
Psyr_0540: Psyr_0540 - oxidoreductase, FAD-binding protein, at 610,174 to 611,349
_0540
Psyr_0541: Psyr_0541 - Small multidrug resistance protein, at 611,398 to 611,730
_0541
Psyr_0542: Psyr_0542 - Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal, at 611,935 to 613,080
_0542
Position (kb) 611
612 Strain fitness (log2 ratio) -2
-1
0
1 at 611.338 kb on - strand at 611.382 kb on - strand at 611.382 kb on - strand at 611.382 kb on - strand at 611.382 kb on - strand at 611.382 kb on - strand at 611.382 kb on - strand at 611.383 kb on + strand at 611.383 kb on + strand at 611.384 kb on - strand at 611.384 kb on - strand at 611.384 kb on - strand at 611.384 kb on - strand at 611.495 kb on + strand, within Psyr_0541 at 611.552 kb on + strand, within Psyr_0541 at 611.552 kb on + strand, within Psyr_0541 at 611.552 kb on + strand, within Psyr_0541 at 611.552 kb on + strand, within Psyr_0541 at 611.553 kb on - strand, within Psyr_0541 at 611.717 kb on + strand at 611.717 kb on + strand at 611.717 kb on + strand at 611.718 kb on - strand at 611.721 kb on - strand at 611.721 kb on - strand at 611.721 kb on - strand at 611.762 kb on + strand at 611.762 kb on + strand at 611.762 kb on + strand at 611.805 kb on + strand at 611.815 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Sinomenine 10 mM remove 611,338 - +0.1 611,382 - +0.5 611,382 - +0.6 611,382 - -0.3 611,382 - +1.1 611,382 - -0.0 611,382 - -1.7 611,383 + -0.9 611,383 + -1.3 611,384 - +0.4 611,384 - +0.6 611,384 - +0.2 611,384 - +0.5 611,495 + Psyr_0541 0.29 -0.5 611,552 + Psyr_0541 0.46 +0.1 611,552 + Psyr_0541 0.46 -2.1 611,552 + Psyr_0541 0.46 -1.1 611,552 + Psyr_0541 0.46 -0.3 611,553 - Psyr_0541 0.47 -0.4 611,717 + +0.2 611,717 + -0.3 611,717 + +1.4 611,718 - -0.2 611,721 - +0.8 611,721 - -0.1 611,721 - -0.7 611,762 + -1.9 611,762 + +0.1 611,762 + +0.7 611,805 + +0.4 611,815 + -0.3
Or see this region's nucleotide sequence