Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28425

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
6,324,494	+		PFLU_RS28415	0.82	-0.6
6,324,494	+		PFLU_RS28415	0.82	-2.9
6,324,494	+		PFLU_RS28415	0.82	-1.3
6,324,495	-		PFLU_RS28415	0.82	+0.7
6,324,634	+				-2.3
6,324,634	+				+0.0
6,324,634	+				+0.9
6,324,634	+				-1.0
6,324,634	+				+1.5
6,324,634	+				+1.2
6,324,634	+				-2.6
6,324,634	+				-1.0
6,324,634	+				-2.2
6,324,635	-				+1.1
6,324,635	-				-2.3
6,324,635	-				+0.5
6,324,635	-				+1.1
6,324,635	-				-2.2
6,324,635	-				-0.6
6,324,635	-				+2.2
6,324,635	-				+2.7
6,324,673	+				-1.4
6,324,674	-				-2.5
6,324,703	+				-2.4
6,324,703	+				+0.2
6,324,901	+		PFLU_RS28420	0.34	-0.4
6,324,901	+		PFLU_RS28420	0.34	-1.5
6,324,901	+		PFLU_RS28420	0.34	-2.9
6,324,901	+		PFLU_RS28420	0.34	-2.5
6,324,902	-		PFLU_RS28420	0.34	-1.4
6,324,902	-		PFLU_RS28420	0.34	-2.2
6,324,902	-		PFLU_RS28420	0.34	-1.5
6,324,902	-		PFLU_RS28420	0.34	-0.8
6,324,902	-		PFLU_RS28420	0.34	-2.5
6,324,902	-		PFLU_RS28420	0.34	-2.3
6,324,902	-		PFLU_RS28420	0.34	-2.4
6,324,902	-		PFLU_RS28420	0.34	-1.3
6,324,914	+		PFLU_RS28420	0.35	-1.8
6,324,959	+		PFLU_RS28420	0.41	-1.7
6,324,959	+		PFLU_RS28420	0.41	-1.5
6,324,959	+		PFLU_RS28420	0.41	-2.2
6,324,960	-		PFLU_RS28420	0.41	-0.3
6,324,960	-		PFLU_RS28420	0.41	-1.0
6,324,960	-		PFLU_RS28420	0.41	-1.8
6,325,009	+		PFLU_RS28420	0.47	-1.2
6,325,009	+		PFLU_RS28420	0.47	-0.4
6,325,009	+		PFLU_RS28420	0.47	+0.1
6,325,009	+		PFLU_RS28420	0.47	-1.3
6,325,009	+		PFLU_RS28420	0.47	-2.2
6,325,009	+		PFLU_RS28420	0.47	-1.8
6,325,009	+		PFLU_RS28420	0.47	-2.2
6,325,009	+		PFLU_RS28420	0.47	-0.7
6,325,010	-		PFLU_RS28420	0.47	-0.6
6,325,010	-		PFLU_RS28420	0.47	-2.7
6,325,180	+		PFLU_RS28420	0.69	-0.1
6,325,181	-		PFLU_RS28420	0.69	-1.0
6,325,211	-		PFLU_RS28420	0.73	+0.6
6,325,211	-		PFLU_RS28420	0.73	-2.3
6,325,345	+		PFLU_RS28420	0.90	-2.5
6,325,345	+		PFLU_RS28420	0.90	+0.3
6,325,346	-		PFLU_RS28420	0.90	-2.2
6,325,378	+				-3.0
6,325,378	+				+0.3
6,325,378	+				-2.7
6,325,378	+				-1.9
6,325,379	-				-2.2
6,325,379	-				-2.1
6,325,379	-				-2.3
6,325,379	-				-0.8
6,325,379	-				-1.7
6,325,382	+				-2.0
6,325,382	+				-0.8
6,325,382	+				-0.6
6,325,382	+				-2.4
6,325,383	-				-1.8
6,325,383	-				-1.9
6,325,383	-				-1.5
6,325,383	-				+0.0
6,325,383	-				+0.9
6,325,717	+				-1.0
6,325,870	+		PFLU_RS28430	0.31	+1.2
6,325,870	+		PFLU_RS28430	0.31	-1.6
6,325,870	+		PFLU_RS28430	0.31	+0.8
6,325,870	+		PFLU_RS28430	0.31	+1.7
6,325,870	+		PFLU_RS28430	0.31	-2.2
6,325,870	+		PFLU_RS28430	0.31	+0.8
6,325,870	+		PFLU_RS28430	0.31	+0.0
6,325,870	+		PFLU_RS28430	0.31	-1.3
6,325,870	+		PFLU_RS28430	0.31	+0.8
6,325,870	+		PFLU_RS28430	0.31	-2.5
6,325,870	+		PFLU_RS28430	0.31	+1.8
6,325,870	+		PFLU_RS28430	0.31	-0.1
6,325,870	+		PFLU_RS28430	0.31	-0.1
6,325,870	+		PFLU_RS28430	0.31	+3.2
6,325,870	+		PFLU_RS28430	0.31	-1.6
6,325,870	+		PFLU_RS28430	0.31	+1.9
6,325,870	+		PFLU_RS28430	0.31	+0.6
6,325,870	+		PFLU_RS28430	0.31	+1.3
6,325,871	-		PFLU_RS28430	0.31	-1.5
6,325,871	-		PFLU_RS28430	0.31	-0.4
6,325,871	-		PFLU_RS28430	0.31	-0.4
6,325,871	-		PFLU_RS28430	0.31	+1.1
6,325,871	-		PFLU_RS28430	0.31	+1.1
6,325,871	-		PFLU_RS28430	0.31	-1.0
6,325,871	-		PFLU_RS28430	0.31	+0.2
6,325,871	-		PFLU_RS28430	0.31	+1.5
6,325,871	-		PFLU_RS28430	0.31	+0.3
6,325,871	-		PFLU_RS28430	0.31	-3.0
6,325,871	-		PFLU_RS28430	0.31	+0.1
6,325,871	-		PFLU_RS28430	0.31	-1.6
6,325,871	-		PFLU_RS28430	0.31	-2.1
6,325,871	-		PFLU_RS28430	0.31	+3.2
6,325,871	-		PFLU_RS28430	0.31	-2.9
6,325,871	-		PFLU_RS28430	0.31	-2.3
6,325,871	-		PFLU_RS28430	0.31	+2.4
6,325,871	-		PFLU_RS28430	0.31	+0.3
6,325,871	-		PFLU_RS28430	0.31	-0.8
6,325,871	-		PFLU_RS28430	0.31	-0.4
6,325,871	-		PFLU_RS28430	0.31	-1.4
6,325,871	-		PFLU_RS28430	0.31	-0.3
6,325,871	-		PFLU_RS28430	0.31	-1.3
6,325,871	-		PFLU_RS28430	0.31	-1.5
6,325,871	-		PFLU_RS28430	0.31	-1.4
6,325,871	-		PFLU_RS28430	0.31	+3.7
6,325,871	-		PFLU_RS28430	0.31	+0.4
6,325,871	-		PFLU_RS28430	0.31	+0.2
6,325,871	-		PFLU_RS28430	0.31	+1.1
6,325,943	+		PFLU_RS28430	0.51	+1.3
6,325,944	-		PFLU_RS28430	0.51	+0.7
6,325,944	-		PFLU_RS28430	0.51	+1.9
6,325,944	-		PFLU_RS28430	0.51	-3.1
6,325,944	-		PFLU_RS28430	0.51	+2.2
6,325,982	+		PFLU_RS28430	0.61	+1.7
6,325,982	+		PFLU_RS28430	0.61	-0.0
6,325,982	+		PFLU_RS28430	0.61	-0.7
6,325,982	+		PFLU_RS28430	0.61	-1.6
6,325,982	+		PFLU_RS28430	0.61	+2.7
6,325,982	+		PFLU_RS28430	0.61	-1.2
6,325,982	+		PFLU_RS28430	0.61	+0.2
6,325,982	+		PFLU_RS28430	0.61	-1.2
6,325,982	+		PFLU_RS28430	0.61	-1.2
6,325,982	+		PFLU_RS28430	0.61	-2.0
6,325,982	+		PFLU_RS28430	0.61	+0.9
6,325,982	+		PFLU_RS28430	0.61	-1.2
6,325,982	+		PFLU_RS28430	0.61	-0.3
6,325,982	+		PFLU_RS28430	0.61	+0.9
6,325,982	+		PFLU_RS28430	0.61	+1.0
6,325,982	+		PFLU_RS28430	0.61	-1.5
6,325,982	+		PFLU_RS28430	0.61	+0.5
6,325,982	+		PFLU_RS28430	0.61	-1.3
6,325,982	+		PFLU_RS28430	0.61	-1.4
6,325,982	+		PFLU_RS28430	0.61	-0.2
6,325,982	+		PFLU_RS28430	0.61	+3.8
6,325,982	+		PFLU_RS28430	0.61	-1.3
6,325,982	+		PFLU_RS28430	0.61	-2.7
6,325,982	+		PFLU_RS28430	0.61	+0.3
6,325,982	+		PFLU_RS28430	0.61	+1.0
6,325,982	+		PFLU_RS28430	0.61	-0.3
6,325,982	+		PFLU_RS28430	0.61	+0.8
6,325,982	+		PFLU_RS28430	0.61	+0.6
6,325,983	-		PFLU_RS28430	0.61	-0.7
6,325,983	-		PFLU_RS28430	0.61	-2.4
6,325,983	-		PFLU_RS28430	0.61	+2.7
6,325,983	-		PFLU_RS28430	0.61	-1.2
6,325,983	-		PFLU_RS28430	0.61	+0.2
6,325,983	-		PFLU_RS28430	0.61	-0.1
6,325,983	-		PFLU_RS28430	0.61	-1.2
6,325,983	-		PFLU_RS28430	0.61	+0.6
6,325,983	-		PFLU_RS28430	0.61	+2.6
6,325,983	-		PFLU_RS28430	0.61	-1.1
6,325,983	-		PFLU_RS28430	0.61	+0.7
6,325,983	-		PFLU_RS28430	0.61	-0.6
6,325,983	-		PFLU_RS28430	0.61	+1.2
6,325,983	-		PFLU_RS28430	0.61	+0.4
6,325,983	-		PFLU_RS28430	0.61	-1.8
6,325,983	-		PFLU_RS28430	0.61	-1.3
6,325,983	-		PFLU_RS28430	0.61	-0.5
6,325,983	-		PFLU_RS28430	0.61	-0.1
6,325,983	-		PFLU_RS28430	0.61	-0.5
6,325,983	-		PFLU_RS28430	0.61	+2.3
6,325,983	-		PFLU_RS28430	0.61	+0.9
6,325,983	-		PFLU_RS28430	0.61	-2.3
6,325,983	-		PFLU_RS28430	0.61	-1.2
6,325,983	-		PFLU_RS28430	0.61	+1.2
6,325,983	-		PFLU_RS28430	0.61	-1.2
6,325,983	-		PFLU_RS28430	0.61	+0.3
6,325,983	-		PFLU_RS28430	0.61	-1.7
6,325,983	-		PFLU_RS28430	0.61	+0.9
6,325,983	-		PFLU_RS28430	0.61	+1.4
6,325,983	-		PFLU_RS28430	0.61	-0.8
6,325,983	-		PFLU_RS28430	0.61	-0.1
6,325,983	-		PFLU_RS28430	0.61	+0.7
6,325,983	-		PFLU_RS28430	0.61	+1.6
6,325,986	+		PFLU_RS28430	0.62	+0.2
6,325,986	+		PFLU_RS28430	0.62	+0.2
6,325,986	+		PFLU_RS28430	0.62	+0.0
6,325,986	+		PFLU_RS28430	0.62	-2.6
6,325,986	+		PFLU_RS28430	0.62	-1.6
6,325,986	+		PFLU_RS28430	0.62	-1.0
6,325,986	+		PFLU_RS28430	0.62	+1.4
6,325,986	+		PFLU_RS28430	0.62	+1.0
6,325,986	+		PFLU_RS28430	0.62	+0.4
6,325,986	+		PFLU_RS28430	0.62	-1.9
6,325,986	+		PFLU_RS28430	0.62	+1.0
6,325,987	-		PFLU_RS28430	0.62	+0.4
6,325,987	-		PFLU_RS28430	0.62	-0.8
6,325,987	-		PFLU_RS28430	0.62	-1.4
6,325,987	-		PFLU_RS28430	0.62	+1.6
6,325,987	-		PFLU_RS28430	0.62	-0.6
6,325,987	-		PFLU_RS28430	0.62	-1.0
6,325,987	-		PFLU_RS28430	0.62	-2.0
6,325,987	-		PFLU_RS28430	0.62	+0.9
6,325,987	-		PFLU_RS28430	0.62	-0.8
6,325,987	-		PFLU_RS28430	0.62	-1.9
6,325,987	-		PFLU_RS28430	0.62	+1.3
6,325,996	+		PFLU_RS28430	0.65	-2.0
6,325,996	+		PFLU_RS28430	0.65	+0.0
6,325,996	+		PFLU_RS28430	0.65	-1.0
6,325,996	+		PFLU_RS28430	0.65	+1.1
6,325,997	-		PFLU_RS28430	0.65	-1.2
6,325,997	-		PFLU_RS28430	0.65	+1.5
6,325,997	-		PFLU_RS28430	0.65	+1.1
6,325,997	-		PFLU_RS28430	0.65	-0.3
6,325,997	-		PFLU_RS28430	0.65	-3.0
6,325,997	-		PFLU_RS28430	0.65	-2.9
6,325,997	-		PFLU_RS28430	0.65	-2.7
6,325,997	-		PFLU_RS28430	0.65	-2.4
6,325,997	-		PFLU_RS28430	0.65	+3.9
6,325,997	-		PFLU_RS28430	0.65	+2.9
6,325,997	-		PFLU_RS28430	0.65	+2.3
6,325,997	-		PFLU_RS28430	0.65	-1.5
6,325,997	-		PFLU_RS28430	0.65	+0.5
6,326,026	+		PFLU_RS28430	0.72	+1.4
6,326,112	+				+1.4
6,326,112	+				+0.1
6,326,112	+				-0.1
6,326,112	+				+1.9
6,326,112	+				+0.9
6,326,112	+				+0.4
6,326,113	-				+2.4
6,326,113	-				-2.2
6,326,113	-				+0.5
6,326,113	-				+1.9
6,326,120	+				-0.6
6,326,120	+				-2.2
6,326,120	+				-0.1
6,326,120	+				+0.5
6,326,121	-				+2.1
6,326,121	-				-2.3
6,326,121	-				-2.5
6,326,165	+				-0.1
6,326,165	+				+1.6
6,326,165	+				+2.2
6,326,165	+				-0.7
6,326,165	+				-0.2
6,326,165	+				+2.0
6,326,165	+				+0.6
6,326,165	+				+1.5
6,326,165	+				+3.7
6,326,165	+				-1.3
6,326,165	+				-0.9
6,326,165	+				-0.8
6,326,165	+				-1.4
6,326,165	+				-2.0
6,326,165	+				-1.1
6,326,165	+				-1.0
6,326,165	+				+1.3
6,326,165	+				+0.2
6,326,165	+				+1.8
6,326,165	+				+1.0
6,326,165	+				-0.7
6,326,165	+				-2.4
6,326,165	+				+0.7
6,326,165	+				-1.1
6,326,165	+				+1.9
6,326,165	+				-1.6
6,326,165	+				+1.7
6,326,165	+				+1.9
6,326,165	+				+1.4
6,326,165	+				+2.1
6,326,166	-				-2.6
6,326,166	-				-0.8
6,326,166	-				+2.2
6,326,166	-				-1.1
6,326,166	-				-1.3
6,326,166	-				-0.9
6,326,166	-				+3.0
6,326,166	-				-0.5
6,326,166	-				+1.7
6,326,166	-				-0.2
6,326,166	-				-0.5
6,326,166	-				-0.9
6,326,167	+				+2.7
6,326,168	-				-0.5
6,326,168	-				-1.6
6,326,168	-				+1.8
6,326,168	-				-2.8
6,326,168	-				-1.6
6,326,203	+				-1.3
6,326,203	+				-2.7
6,326,203	+				+1.8
6,326,203	+				-0.6
6,326,203	+				-0.6
6,326,203	+				+0.8
6,326,203	+				+0.9
6,326,203	+				-0.3
6,326,203	+				+2.5
6,326,203	+				+1.0
6,326,204	-				+0.5
6,326,204	-				-1.1
6,326,204	-				+1.2
6,326,204	-				+2.4
6,326,204	-				-1.4
6,326,204	-				+2.7
6,326,204	-				+2.1
6,326,204	-				-0.1
6,326,204	-				+1.0
6,326,242	+				+1.3
6,326,242	+				-1.6
6,326,242	+				+2.0
6,326,243	-				+1.5
6,326,274	+				+1.1
6,326,274	+				+0.8
6,326,274	+				+0.6
6,326,275	-				+2.1
6,326,579	+		PFLU_RS28435	0.52	+2.0
6,326,580	-		PFLU_RS28435	0.52	-0.4
6,326,657	+		PFLU_RS28435	0.63	-1.4
6,326,657	+		PFLU_RS28435	0.63	-0.4
6,326,657	+		PFLU_RS28435	0.63	-0.6
6,326,657	+		PFLU_RS28435	0.63	-1.3
6,326,658	-		PFLU_RS28435	0.63	+1.4
6,326,658	-		PFLU_RS28435	0.63	-2.1
6,326,658	-		PFLU_RS28435	0.63	+1.3
6,326,658	-		PFLU_RS28435	0.63	+1.2
6,326,658	-		PFLU_RS28435	0.63	-0.0
6,326,658	-		PFLU_RS28435	0.63	+2.0
6,326,658	-		PFLU_RS28435	0.63	+1.1
6,326,658	-		PFLU_RS28435	0.63	-1.3