Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27390

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
6,090,520	+				-0.9
6,090,520	+				-1.4
6,090,520	+				+0.4
6,090,520	+				-2.4
6,090,521	-				+0.8
6,090,521	-				-2.5
6,090,521	-				-1.0
6,090,521	-				-1.5
6,090,572	+				-2.8
6,090,573	-				+0.3
6,090,573	-				-0.6
6,090,578	+				-3.1
6,090,579	-				-0.9
6,090,579	-				+0.5
6,090,579	-				-1.5
6,090,580	+				-2.1
6,090,580	+				-1.7
6,090,580	+				-2.5
6,090,581	-				+0.0
6,090,623	+				-0.3
6,090,623	+				+1.0
6,090,623	+				-1.9
6,090,623	+				-1.1
6,090,623	+				-0.7
6,090,623	+				+0.4
6,090,623	+				+2.8
6,090,623	+				-0.7
6,090,624	-				-2.1
6,090,624	-				-0.7
6,090,624	-				-3.0
6,090,624	-				-1.4
6,090,624	-				+1.0
6,090,624	-				+1.0
6,090,624	-				-0.5
6,090,624	-				-2.6
6,090,645	+				-1.7
6,090,645	+				-0.5
6,090,645	+				+0.6
6,090,645	+				+0.8
6,090,645	+				-2.8
6,090,646	-				+1.7
6,090,646	-				+0.6
6,090,646	-				+1.1
6,090,646	-				+1.3
6,090,646	-				+2.4
6,090,646	-				+2.5
6,090,657	-				+0.5
6,090,657	-				-0.1
6,090,657	-				+0.5
6,090,726	+				+1.4
6,090,726	+				+1.4
6,090,726	+				+2.5
6,090,802	+		PFLU_RS27385	0.14	-1.2
6,090,802	+		PFLU_RS27385	0.14	+1.9
6,090,802	+		PFLU_RS27385	0.14	-0.1
6,090,802	+		PFLU_RS27385	0.14	-0.6
6,090,802	+		PFLU_RS27385	0.14	+0.6
6,090,802	+		PFLU_RS27385	0.14	+0.3
6,090,802	+		PFLU_RS27385	0.14	-0.2
6,090,802	+		PFLU_RS27385	0.14	-1.6
6,090,802	-		PFLU_RS27385	0.14	-0.5
6,090,803	-		PFLU_RS27385	0.14	+1.1
6,090,803	-		PFLU_RS27385	0.14	+2.4
6,090,803	-		PFLU_RS27385	0.14	+1.5
6,090,803	-		PFLU_RS27385	0.14	-0.8
6,090,803	-		PFLU_RS27385	0.14	-1.4
6,090,836	-		PFLU_RS27385	0.18	+1.4
6,090,897	+		PFLU_RS27385	0.25	+2.5
6,090,897	+		PFLU_RS27385	0.25	+3.0
6,090,897	+		PFLU_RS27385	0.25	-0.4
6,090,898	-		PFLU_RS27385	0.25	+0.4
6,090,898	-		PFLU_RS27385	0.25	+2.1
6,090,898	-		PFLU_RS27385	0.25	-0.2
6,090,898	-		PFLU_RS27385	0.25	+0.2
6,090,899	+		PFLU_RS27385	0.25	+0.6
6,090,900	-		PFLU_RS27385	0.26	+3.4
6,090,900	-		PFLU_RS27385	0.26	-0.4
6,090,900	-		PFLU_RS27385	0.26	+4.1
6,090,905	+		PFLU_RS27385	0.26	+1.2
6,090,905	+		PFLU_RS27385	0.26	+2.3
6,090,906	-		PFLU_RS27385	0.26	-0.4
6,090,906	-		PFLU_RS27385	0.26	+2.5
6,090,917	-		PFLU_RS27385	0.28	+1.9
6,090,917	-		PFLU_RS27385	0.28	+2.2
6,090,917	-		PFLU_RS27385	0.28	+0.1
6,090,917	-		PFLU_RS27385	0.28	+2.9
6,090,996	+		PFLU_RS27385	0.37	-0.7
6,090,996	+		PFLU_RS27385	0.37	-1.9
6,090,997	-		PFLU_RS27385	0.37	-2.4
6,091,082	+		PFLU_RS27385	0.48	+0.4
6,091,082	+		PFLU_RS27385	0.48	-0.5
6,091,082	+		PFLU_RS27385	0.48	+4.9
6,091,082	+		PFLU_RS27385	0.48	+2.4
6,091,443	+				+0.1
6,091,443	+				-0.4
6,091,444	-				+2.4
6,091,444	-				+0.7
6,092,199	+				+1.3
6,092,199	+				+0.8
6,092,199	+				-1.5
6,092,200	-				-0.8
6,092,221	+				+0.4
6,092,221	+				-3.1
6,092,221	+				-2.0
6,092,221	+				+3.5
6,092,221	+				+1.4
6,092,221	+				-0.6
6,092,221	+				-0.7
6,092,221	+				+2.1
6,092,221	+				-0.8
6,092,221	+				-1.3
6,092,221	+				-2.2
6,092,221	+				+1.8
6,092,221	+				+2.3
6,092,221	+				-0.4
6,092,221	+				-2.0
6,092,221	+				+1.1
6,092,221	+				-2.1
6,092,221	+				+1.5
6,092,221	+				+3.0
6,092,221	+				-1.7
6,092,221	+				-0.2
6,092,221	+				-2.0
6,092,221	+				+1.1
6,092,221	+				+2.3
6,092,221	+				+0.8
6,092,221	+				-0.6
6,092,221	+				+0.2
6,092,221	+				+0.1
6,092,221	+				+3.0
6,092,221	+				+1.3
6,092,221	+				+1.3
6,092,221	+				+1.1
6,092,221	+				+2.0
6,092,221	+				-1.1
6,092,221	+				+4.4
6,092,221	+				+0.9
6,092,221	+				+0.1
6,092,221	+				+1.1
6,092,221	+				-0.9
6,092,221	+				-2.0
6,092,221	+				+2.4
6,092,221	+				+0.6
6,092,221	+				+0.6
6,092,221	+				-1.7
6,092,221	+				+0.2
6,092,221	+				+0.6
6,092,221	+				-0.8
6,092,221	+				+2.1
6,092,221	+				-2.3
6,092,221	+				-0.2
6,092,221	+				-1.1
6,092,221	+				+0.8
6,092,221	+				-0.0
6,092,222	-				-1.9
6,092,222	-				-0.8
6,092,222	-				-1.7
6,092,222	-				+3.6
6,092,222	-				-0.3
6,092,222	-				+1.4
6,092,222	-				+3.9
6,092,222	-				-1.7
6,092,222	-				+2.4
6,092,222	-				-2.1
6,092,222	-				+1.9
6,092,222	-				-1.7
6,092,222	-				-0.8
6,092,222	-				+3.4
6,092,222	-				+1.0
6,092,222	-				+0.7
6,092,222	-				-1.9
6,092,222	-				-0.4
6,092,222	-				-2.3
6,092,222	-				+1.3
6,092,222	-				-0.5
6,092,222	-				-1.9
6,092,222	-				+2.1
6,092,222	-				-1.6
6,092,222	-				-2.0
6,092,222	-				+0.5
6,092,222	-				+1.1
6,092,222	-				+2.2
6,092,222	-				-1.8
6,092,222	-				+2.5
6,092,222	-				+2.7
6,092,222	-				+1.5
6,092,222	-				-0.2
6,092,222	-				+0.5
6,092,222	-				+1.5
6,092,222	-				-1.1
6,092,222	-				+2.3
6,092,222	-				+0.3
6,092,222	-				+1.7
6,092,223	+				-1.4
6,092,223	+				+1.2
6,092,223	+				+0.7
6,092,223	+				-2.4
6,092,223	+				+1.7
6,092,223	+				-1.1
6,092,223	+				+0.1
6,092,223	+				-1.2
6,092,223	+				-1.6
6,092,223	+				-0.3
6,092,223	+				-2.3
6,092,224	-				-0.6
6,092,224	-				+1.8
6,092,224	-				-1.6
6,092,224	-				+0.1
6,092,224	-				-2.1
6,092,224	-				-1.5
6,092,224	-				+1.2
6,092,224	-				+1.3
6,092,224	-				+2.9
6,092,224	-				-0.3
6,092,224	-				+1.5
6,092,224	-				-0.4
6,092,224	-				-1.9
6,092,266	+				+0.8
6,092,266	+				-1.5
6,092,266	+				-0.9
6,092,266	+				+2.7
6,092,269	+				-0.8
6,092,269	+				-2.2
6,092,269	+				-2.1
6,092,269	+				+3.6
6,092,269	+				-1.7
6,092,270	-				+0.3
6,092,270	-				-0.8
6,092,270	-				-2.0
6,092,414	+		PFLU_RS27395	0.13	+0.5
6,092,414	+		PFLU_RS27395	0.13	-0.7
6,092,415	-		PFLU_RS27395	0.13	-1.5
6,092,418	+		PFLU_RS27395	0.13	+0.9
6,092,418	+		PFLU_RS27395	0.13	+2.4
6,092,418	+		PFLU_RS27395	0.13	-1.5
6,092,418	+		PFLU_RS27395	0.13	-2.6
6,092,418	+		PFLU_RS27395	0.13	-0.8
6,092,418	+		PFLU_RS27395	0.13	-1.1
6,092,418	+		PFLU_RS27395	0.13	+0.8
6,092,418	+		PFLU_RS27395	0.13	-1.8
6,092,418	+		PFLU_RS27395	0.13	+0.3
6,092,419	-		PFLU_RS27395	0.13	-0.5
6,092,419	-		PFLU_RS27395	0.13	+0.8
6,092,419	-		PFLU_RS27395	0.13	+0.1
6,092,419	-		PFLU_RS27395	0.13	+3.2
6,092,419	-		PFLU_RS27395	0.13	+0.1
6,092,419	-		PFLU_RS27395	0.13	+0.1
6,092,419	-		PFLU_RS27395	0.13	+3.6
6,092,419	-		PFLU_RS27395	0.13	-2.2
6,092,522	+		PFLU_RS27395	0.22	+1.6
6,092,522	+		PFLU_RS27395	0.22	-1.4
6,092,522	+		PFLU_RS27395	0.22	-1.5
6,092,522	+		PFLU_RS27395	0.22	-0.2
6,092,523	-		PFLU_RS27395	0.22	-1.6
6,092,523	-		PFLU_RS27395	0.22	+0.5
6,092,523	-		PFLU_RS27395	0.22	+1.6
6,092,523	-		PFLU_RS27395	0.22	+1.4
6,092,523	-		PFLU_RS27395	0.22	+0.5
6,092,523	-		PFLU_RS27395	0.22	+0.8
6,092,523	-		PFLU_RS27395	0.22	+0.2
6,092,523	-		PFLU_RS27395	0.22	+0.4
6,092,560	+		PFLU_RS27395	0.26	+1.6
6,092,560	+		PFLU_RS27395	0.26	+1.3
6,092,560	+		PFLU_RS27395	0.26	-0.3
6,092,560	+		PFLU_RS27395	0.26	+0.9
6,092,560	+		PFLU_RS27395	0.26	-2.6
6,092,560	+		PFLU_RS27395	0.26	+2.5
6,092,561	-		PFLU_RS27395	0.26	-2.2
6,092,561	-		PFLU_RS27395	0.26	+2.8
6,092,561	-		PFLU_RS27395	0.26	+2.4
6,092,561	-		PFLU_RS27395	0.26	-0.5
6,092,561	-		PFLU_RS27395	0.26	+2.3
6,092,561	-		PFLU_RS27395	0.26	-1.8
6,092,597	+		PFLU_RS27395	0.29	+1.6
6,092,694	-		PFLU_RS27395	0.37	+5.1
6,092,729	-		PFLU_RS27395	0.40	-0.2
6,092,729	-		PFLU_RS27395	0.40	-1.7
6,092,812	+		PFLU_RS27395	0.48	+1.4
6,092,813	-		PFLU_RS27395	0.48	-1.3
6,092,813	-		PFLU_RS27395	0.48	-0.8
6,092,920	+		PFLU_RS27395	0.57	+4.2
6,092,920	+		PFLU_RS27395	0.57	-0.8
6,092,920	+		PFLU_RS27395	0.57	-1.9
6,092,921	-		PFLU_RS27395	0.57	-1.9
6,092,921	-		PFLU_RS27395	0.57	-2.1
6,092,921	-		PFLU_RS27395	0.57	+3.0
6,092,921	-		PFLU_RS27395	0.57	+0.5
6,092,921	-		PFLU_RS27395	0.57	-1.6
6,093,091	+		PFLU_RS27395	0.72	-1.2
6,093,091	+		PFLU_RS27395	0.72	-3.0
6,093,091	+		PFLU_RS27395	0.72	-1.4
6,093,091	+		PFLU_RS27395	0.72	-1.4
6,093,169	+		PFLU_RS27395	0.79	+0.6