Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22290

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
5,011,911	+				-0.1
5,011,912	-				+1.2
5,011,912	-				-1.9
5,011,912	-				-2.5
5,011,925	-				+0.7
5,011,935	+				+2.9
5,011,935	+				-0.2
5,011,935	+				+0.7
5,011,935	+				+0.1
5,011,935	+				+1.2
5,011,935	+				-1.9
5,011,936	-				+0.2
5,011,936	-				+0.5
5,011,978	+				-0.6
5,011,978	+				-2.2
5,011,979	-				+2.7
5,011,979	-				-1.0
5,011,979	-				-1.5
5,011,979	-				+0.1
5,012,035	+				-0.3
5,012,036	-				+1.2
5,012,036	-				+1.6
5,012,053	+				-2.0
5,012,053	+				+1.9
5,012,053	+				-2.1
5,012,054	-				-2.6
5,012,054	-				+1.5
5,012,055	+				+1.3
5,012,055	+				+1.8
5,012,055	+				+2.3
5,012,055	+				-2.1
5,012,055	+				-2.3
5,012,055	+				+1.8
5,012,056	-				+1.2
5,012,056	-				+0.4
5,012,056	-				+1.2
5,012,056	-				-0.3
5,012,056	-				-1.6
5,012,056	-				-0.3
5,012,056	-				-1.5
5,012,056	-				-2.1
5,012,056	-				+1.7
5,012,056	-				-2.1
5,012,148	-				-1.2
5,012,188	+				-0.3
5,012,188	+				+1.6
5,012,188	+				-1.4
5,012,189	-				-0.5
5,012,189	-				+1.3
5,012,189	-				+1.1
5,012,191	+				-1.3
5,012,191	+				+2.2
5,012,191	+				+1.6
5,012,191	+				-0.7
5,012,191	+				-0.2
5,012,191	+				+1.3
5,012,191	+				+1.0
5,012,192	-				-1.3
5,012,192	-				-1.6
5,012,192	-				-1.9
5,012,192	-				+2.2
5,012,200	+				-1.3
5,012,219	+				-0.0
5,012,219	+				+0.6
5,012,219	+				+0.2
5,012,219	+				-2.4
5,012,229	+				-0.5
5,012,229	+				-3.0
5,012,229	+				-0.3
5,012,230	-				+0.6
5,012,230	-				+0.7
5,012,241	-				-0.3
5,012,241	-				-1.9
5,012,241	-				-1.6
5,012,241	-				-0.6
5,012,248	+				-1.1
5,012,287	-				-2.4
5,012,410	-		PFLU_RS22285	0.29	+4.3
5,012,410	-		PFLU_RS22285	0.29	+0.2
5,012,523	+		PFLU_RS22285	0.49	-0.5
5,012,523	+		PFLU_RS22285	0.49	-0.3
5,012,523	+		PFLU_RS22285	0.49	+1.7
5,012,523	+		PFLU_RS22285	0.49	-2.7
5,012,523	+		PFLU_RS22285	0.49	-1.3
5,012,523	+		PFLU_RS22285	0.49	-1.3
5,012,524	-		PFLU_RS22285	0.49	-1.3
5,012,524	-		PFLU_RS22285	0.49	-1.3
5,012,524	-		PFLU_RS22285	0.49	-2.2
5,012,524	-		PFLU_RS22285	0.49	-2.3
5,012,524	-		PFLU_RS22285	0.49	+2.1
5,012,534	+		PFLU_RS22285	0.51	-0.4
5,012,614	-		PFLU_RS22285	0.65	-1.0
5,012,667	+		PFLU_RS22285	0.74	-0.6
5,012,667	+		PFLU_RS22285	0.74	-2.0
5,012,667	+		PFLU_RS22285	0.74	+1.4
5,012,668	-		PFLU_RS22285	0.74	+0.6
5,012,668	-		PFLU_RS22285	0.74	-2.8
5,012,686	+		PFLU_RS22285	0.77	+2.0
5,012,686	+		PFLU_RS22285	0.77	+1.4
5,012,686	+		PFLU_RS22285	0.77	+0.1
5,012,686	+		PFLU_RS22285	0.77	-0.1
5,012,686	+		PFLU_RS22285	0.77	+1.6
5,012,686	+		PFLU_RS22285	0.77	+0.0
5,012,686	+		PFLU_RS22285	0.77	-0.5
5,012,686	+		PFLU_RS22285	0.77	+2.6
5,012,686	+		PFLU_RS22285	0.77	-1.4
5,012,686	+		PFLU_RS22285	0.77	-0.3
5,012,686	+		PFLU_RS22285	0.77	-0.5
5,012,686	+		PFLU_RS22285	0.77	-2.4
5,012,687	-		PFLU_RS22285	0.77	-1.5
5,012,687	-		PFLU_RS22285	0.77	+0.5
5,012,687	-		PFLU_RS22285	0.77	-1.4
5,012,687	-		PFLU_RS22285	0.77	+2.5
5,012,687	-		PFLU_RS22285	0.77	-1.3
5,012,687	-		PFLU_RS22285	0.77	+2.6
5,012,687	-		PFLU_RS22285	0.77	-1.7
5,012,687	-		PFLU_RS22285	0.77	+1.4
5,012,687	-		PFLU_RS22285	0.77	+0.9
5,012,687	-		PFLU_RS22285	0.77	-0.8
5,012,687	-		PFLU_RS22285	0.77	-1.7
5,012,687	-		PFLU_RS22285	0.77	+1.4
5,012,687	-		PFLU_RS22285	0.77	-2.1
5,012,708	+		PFLU_RS22285	0.81	+1.2
5,012,708	+		PFLU_RS22285	0.81	-2.5
5,012,708	+		PFLU_RS22285	0.81	-1.7
5,012,708	+		PFLU_RS22285	0.81	-0.8
5,012,708	+		PFLU_RS22285	0.81	-1.3
5,012,709	-		PFLU_RS22285	0.81	-1.5
5,012,709	-		PFLU_RS22285	0.81	-0.7
5,012,709	-		PFLU_RS22285	0.81	-0.2
5,012,709	-		PFLU_RS22285	0.81	-0.3
5,012,734	+		PFLU_RS22285	0.86	+0.6
5,012,734	+		PFLU_RS22285	0.86	-2.2
5,012,734	+		PFLU_RS22285	0.86	-1.9
5,012,735	-		PFLU_RS22285	0.86	+1.5
5,012,735	-		PFLU_RS22285	0.86	-2.4
5,012,735	-		PFLU_RS22285	0.86	-1.6
5,012,735	-		PFLU_RS22285	0.86	-2.0
5,012,735	-		PFLU_RS22285	0.86	+1.8
5,012,750	+		PFLU_RS22285	0.88	+1.7
5,012,750	+		PFLU_RS22285	0.88	-0.1
5,012,750	+		PFLU_RS22285	0.88	+0.1
5,012,751	-		PFLU_RS22285	0.89	+1.5
5,012,751	-		PFLU_RS22285	0.89	+1.4
5,012,751	-		PFLU_RS22285	0.89	-1.8
5,012,751	-		PFLU_RS22285	0.89	-0.3
5,012,751	-		PFLU_RS22285	0.89	-2.7
5,012,751	-		PFLU_RS22285	0.89	+0.8
5,012,751	-		PFLU_RS22285	0.89	-1.1
5,013,004	+				-2.4
5,013,004	+				+0.6
5,013,016	+				+4.5
5,013,016	+				-1.7
5,013,016	+				-0.2
5,013,016	+				-1.9
5,013,016	+				-1.6
5,013,016	+				-2.2
5,013,017	-				+0.7
5,013,017	-				-3.1
5,013,017	-				-0.7
5,013,017	-				-0.1
5,013,017	-				+0.7
5,013,017	-				-0.8
5,013,017	-				-2.0
5,013,017	-				+0.5
5,013,017	-				+2.2
5,013,017	-				+1.1
5,013,119	-		PFLU_RS22290	0.12	-1.6
5,013,119	-		PFLU_RS22290	0.12	+2.4
5,013,119	-		PFLU_RS22290	0.12	-2.3
5,013,208	+		PFLU_RS22290	0.18	+0.8
5,013,209	-		PFLU_RS22290	0.18	-0.3
5,013,209	-		PFLU_RS22290	0.18	-0.6
5,013,214	+		PFLU_RS22290	0.18	+0.5
5,013,214	+		PFLU_RS22290	0.18	-1.0
5,013,214	+		PFLU_RS22290	0.18	+1.1
5,013,215	-		PFLU_RS22290	0.18	+1.8
5,013,215	-		PFLU_RS22290	0.18	-0.6
5,013,215	-		PFLU_RS22290	0.18	-1.1
5,013,215	-		PFLU_RS22290	0.18	+0.3
5,013,215	-		PFLU_RS22290	0.18	-1.7
5,013,215	-		PFLU_RS22290	0.18	+2.1
5,013,279	-		PFLU_RS22290	0.22	+1.1
5,013,313	+		PFLU_RS22290	0.24	-1.5
5,013,361	+		PFLU_RS22290	0.26	+0.7
5,013,361	+		PFLU_RS22290	0.26	+0.3
5,013,361	+		PFLU_RS22290	0.26	-1.2
5,013,408	-		PFLU_RS22290	0.29	-1.9
5,013,408	-		PFLU_RS22290	0.29	-2.1
5,013,565	+		PFLU_RS22290	0.38	-2.5
5,013,565	+		PFLU_RS22290	0.38	+1.6
5,013,565	+		PFLU_RS22290	0.38	-1.9
5,013,566	-		PFLU_RS22290	0.38	-0.7
5,013,566	-		PFLU_RS22290	0.38	+1.7
5,013,566	-		PFLU_RS22290	0.38	+1.2
5,013,660	+		PFLU_RS22290	0.44	+0.7
5,013,660	+		PFLU_RS22290	0.44	+1.0
5,013,660	+		PFLU_RS22290	0.44	-1.3
5,013,660	+		PFLU_RS22290	0.44	+0.0
5,013,661	-		PFLU_RS22290	0.44	+0.5
5,013,661	-		PFLU_RS22290	0.44	-1.1
5,013,661	-		PFLU_RS22290	0.44	+0.5
5,013,661	-		PFLU_RS22290	0.44	+0.3
5,013,742	+		PFLU_RS22290	0.48	-1.8
5,013,766	+		PFLU_RS22290	0.50	-0.1
5,013,766	+		PFLU_RS22290	0.50	+1.1
5,013,766	+		PFLU_RS22290	0.50	+2.4
5,013,767	-		PFLU_RS22290	0.50	+2.1
5,013,767	-		PFLU_RS22290	0.50	+0.3
5,013,767	-		PFLU_RS22290	0.50	-1.4
5,013,767	-		PFLU_RS22290	0.50	-1.6
5,013,784	+		PFLU_RS22290	0.51	-2.3
5,013,784	+		PFLU_RS22290	0.51	+1.0
5,013,784	+		PFLU_RS22290	0.51	+0.7
5,013,784	+		PFLU_RS22290	0.51	+0.2
5,013,784	+		PFLU_RS22290	0.51	-0.3
5,013,784	+		PFLU_RS22290	0.51	-1.6
5,013,784	+		PFLU_RS22290	0.51	-2.2
5,013,785	-		PFLU_RS22290	0.51	-2.0
5,013,785	-		PFLU_RS22290	0.51	-1.8
5,013,785	-		PFLU_RS22290	0.51	-1.0
5,013,785	-		PFLU_RS22290	0.51	-1.6
5,013,785	-		PFLU_RS22290	0.51	-1.2
5,013,785	-		PFLU_RS22290	0.51	+0.5
5,013,785	-		PFLU_RS22290	0.51	-2.4
5,013,785	-		PFLU_RS22290	0.51	+1.4
5,013,785	-		PFLU_RS22290	0.51	+0.2
5,013,785	-		PFLU_RS22290	0.51	-0.6
5,013,797	+		PFLU_RS22290	0.52	-1.9
5,013,797	+		PFLU_RS22290	0.52	+0.4
5,013,797	+		PFLU_RS22290	0.52	-0.1
5,013,798	-		PFLU_RS22290	0.52	+0.5
5,013,798	-		PFLU_RS22290	0.52	+1.4
5,013,868	+		PFLU_RS22290	0.56	-1.0
5,013,868	+		PFLU_RS22290	0.56	-1.1
5,013,868	+		PFLU_RS22290	0.56	+0.7
5,013,868	+		PFLU_RS22290	0.56	+1.8
5,013,868	+		PFLU_RS22290	0.56	+0.0
5,013,868	+		PFLU_RS22290	0.56	-1.1
5,013,868	+		PFLU_RS22290	0.56	-0.7
5,013,868	+		PFLU_RS22290	0.56	+0.1
5,013,869	-		PFLU_RS22290	0.56	-2.4
5,013,869	-		PFLU_RS22290	0.56	+1.3
5,013,869	-		PFLU_RS22290	0.56	-0.9
5,013,869	-		PFLU_RS22290	0.56	+0.1
5,013,869	-		PFLU_RS22290	0.56	+0.1
5,013,869	-		PFLU_RS22290	0.56	+0.2
5,013,869	-		PFLU_RS22290	0.56	-1.8
5,013,869	-		PFLU_RS22290	0.56	-1.6
5,013,869	-		PFLU_RS22290	0.56	+0.8
5,013,869	-		PFLU_RS22290	0.56	+1.4
5,013,994	+		PFLU_RS22290	0.63	-0.4
5,013,994	+		PFLU_RS22290	0.63	+0.3
5,013,994	+		PFLU_RS22290	0.63	-0.3
5,013,994	+		PFLU_RS22290	0.63	+0.8
5,013,994	+		PFLU_RS22290	0.63	-0.9
5,013,994	+		PFLU_RS22290	0.63	-1.4
5,013,995	-		PFLU_RS22290	0.63	-0.8
5,013,995	-		PFLU_RS22290	0.63	-0.6
5,013,995	-		PFLU_RS22290	0.63	-0.3
5,013,995	-		PFLU_RS22290	0.63	-0.8
5,013,995	-		PFLU_RS22290	0.63	-3.0
5,013,995	-		PFLU_RS22290	0.63	+1.4
5,014,005	+		PFLU_RS22290	0.64	-2.7
5,014,005	+		PFLU_RS22290	0.64	+0.9
5,014,005	+		PFLU_RS22290	0.64	-2.7
5,014,005	+		PFLU_RS22290	0.64	-2.1
5,014,005	+		PFLU_RS22290	0.64	+1.3
5,014,006	-		PFLU_RS22290	0.64	+1.3
5,014,006	-		PFLU_RS22290	0.64	-1.1
5,014,006	-		PFLU_RS22290	0.64	-2.3
5,014,006	-		PFLU_RS22290	0.64	-1.5
5,014,006	-		PFLU_RS22290	0.64	-2.3
5,014,006	-		PFLU_RS22290	0.64	-0.4
5,014,006	-		PFLU_RS22290	0.64	-0.1
5,014,012	+		PFLU_RS22290	0.64	-1.0
5,014,013	-		PFLU_RS22290	0.64	+0.1
5,014,022	+		PFLU_RS22290	0.65	-1.3
5,014,023	-		PFLU_RS22290	0.65	-1.6
5,014,023	-		PFLU_RS22290	0.65	+0.4
5,014,132	-		PFLU_RS22290	0.71	-0.8
5,014,144	+		PFLU_RS22290	0.72	-3.1
5,014,144	+		PFLU_RS22290	0.72	-0.7
5,014,144	+		PFLU_RS22290	0.72	-0.4
5,014,144	+		PFLU_RS22290	0.72	-2.2
5,014,162	+		PFLU_RS22290	0.73	-0.8
5,014,163	-		PFLU_RS22290	0.73	+2.4
5,014,213	+		PFLU_RS22290	0.76	-0.9
5,014,213	+		PFLU_RS22290	0.76	+2.6
5,014,213	+		PFLU_RS22290	0.76	+1.2
5,014,268	+		PFLU_RS22290	0.79	-2.2
5,014,268	+		PFLU_RS22290	0.79	-1.0
5,014,268	+		PFLU_RS22290	0.79	-1.6
5,014,269	-		PFLU_RS22290	0.79	+0.5
5,014,328	-		PFLU_RS22290	0.82	-2.5
5,014,328	-		PFLU_RS22290	0.82	+0.9
5,014,378	+		PFLU_RS22290	0.85	-2.3
5,014,378	+		PFLU_RS22290	0.85	+1.7
5,014,378	+		PFLU_RS22290	0.85	-0.7
5,014,378	+		PFLU_RS22290	0.85	+1.2
5,014,379	-		PFLU_RS22290	0.85	-0.3
5,014,379	-		PFLU_RS22290	0.85	+2.3
5,014,477	+				+0.6
5,014,478	-				-0.6
5,014,478	-				-0.2
5,014,478	-				+1.5
5,014,478	-				-1.7
5,014,512	+				-0.6
5,014,512	+				+2.7
5,014,512	+				+0.8
5,014,513	-				-0.3
5,014,513	-				-1.8
5,014,579	+				+0.7
5,014,673	-				-2.3
5,014,681	+				-2.4
5,014,681	+				-1.0
5,014,681	+				+1.6
5,014,682	-				+1.9
5,014,682	-				+0.5
5,014,720	+				+0.5
5,014,721	-				+2.8
5,014,721	-				-1.2
5,014,721	-				-1.2
5,014,745	+				+1.6
5,014,745	+				-1.8
5,014,745	+				+0.6
5,014,746	-				+3.1
5,014,746	-				+0.3
5,014,746	-				+0.3
5,014,746	-				-2.3
5,014,746	-				+1.6
5,014,780	-				-1.3
5,014,780	-				-2.4
5,014,783	+				+0.7
5,014,783	+				-1.4
5,014,783	+				-0.7
5,014,783	+				-0.9
5,014,783	+				+0.4
5,014,784	-				-2.0
5,014,784	-				+1.6
5,014,784	-				-0.7
5,014,784	-				-2.3
5,014,784	-				-1.2
5,014,887	+				-1.2
5,014,887	+				-1.0
5,014,905	+				+0.9
5,014,906	-				+2.2
5,014,906	-				-2.6
5,014,906	-				-1.3
5,014,921	+				+1.1
5,014,921	+				+0.6
5,014,922	-				-1.2
5,014,922	-				-0.3
5,014,922	-				-1.1
5,014,925	-				+2.0
5,014,967	+				+1.2
5,014,967	+				-1.4
5,014,967	+				-1.5
5,014,967	+				-0.2
5,014,967	+				+2.2
5,014,967	+				-1.8
5,014,967	+				-2.2
5,014,968	-				-1.2
5,014,968	-				+4.2
5,014,968	-				+3.6
5,015,002	+				-0.9
5,015,002	+				+0.4
5,015,002	+				+0.6
5,015,002	+				+1.2
5,015,003	-				+0.7
5,015,003	-				-1.3
5,015,003	-				+1.2
5,015,003	-				+0.0
5,015,003	-				-1.2
5,015,003	-				+0.5
5,015,003	-				+1.4
5,015,094	+				-0.0
5,015,094	+				+0.3
5,015,094	+				+3.5
5,015,095	-				-0.9
5,015,095	-				+0.6
5,015,095	-				+2.1
5,015,204	+		PFLU_RS22295	0.11	+1.1
5,015,204	+		PFLU_RS22295	0.11	-0.3
5,015,204	+		PFLU_RS22295	0.11	+1.7
5,015,204	+		PFLU_RS22295	0.11	-2.8
5,015,204	+		PFLU_RS22295	0.11	-0.2
5,015,204	+		PFLU_RS22295	0.11	+1.3
5,015,205	-		PFLU_RS22295	0.11	-1.5
5,015,205	-		PFLU_RS22295	0.11	-1.0
5,015,205	-		PFLU_RS22295	0.11	-0.2
5,015,205	-		PFLU_RS22295	0.11	+0.7
5,015,205	-		PFLU_RS22295	0.11	+2.4
5,015,205	-		PFLU_RS22295	0.11	+1.3
5,015,205	-		PFLU_RS22295	0.11	-0.4
5,015,205	-		PFLU_RS22295	0.11	+0.3
5,015,270	-		PFLU_RS22295	0.15	+0.9
5,015,371	+		PFLU_RS22295	0.21	+0.9
5,015,371	+		PFLU_RS22295	0.21	+0.7
5,015,371	+		PFLU_RS22295	0.21	+1.1
5,015,371	+		PFLU_RS22295	0.21	+1.6
5,015,371	+		PFLU_RS22295	0.21	-1.2
5,015,371	+		PFLU_RS22295	0.21	+0.5
5,015,372	-		PFLU_RS22295	0.21	+1.2
5,015,372	-		PFLU_RS22295	0.21	-1.7
5,015,372	-		PFLU_RS22295	0.21	+2.1
5,015,372	-		PFLU_RS22295	0.21	+0.9
5,015,396	+		PFLU_RS22295	0.23	+1.6
5,015,396	+		PFLU_RS22295	0.23	+0.5
5,015,396	+		PFLU_RS22295	0.23	+1.6
5,015,396	+		PFLU_RS22295	0.23	-1.3
5,015,396	+		PFLU_RS22295	0.23	-2.1
5,015,396	+		PFLU_RS22295	0.23	-1.3
5,015,396	+		PFLU_RS22295	0.23	+2.1
5,015,396	+		PFLU_RS22295	0.23	-0.5
5,015,396	+		PFLU_RS22295	0.23	-0.3
5,015,396	+		PFLU_RS22295	0.23	+2.0
5,015,396	+		PFLU_RS22295	0.23	+1.0
5,015,397	-		PFLU_RS22295	0.23	-0.3
5,015,397	-		PFLU_RS22295	0.23	-3.0
5,015,397	-		PFLU_RS22295	0.23	-0.6
5,015,397	-		PFLU_RS22295	0.23	-1.7
5,015,397	-		PFLU_RS22295	0.23	-0.7
5,015,397	-		PFLU_RS22295	0.23	-0.1
5,015,397	-		PFLU_RS22295	0.23	-1.2
5,015,397	-		PFLU_RS22295	0.23	-1.3
5,015,397	-		PFLU_RS22295	0.23	+1.8
5,015,397	-		PFLU_RS22295	0.23	-1.7
5,015,397	-		PFLU_RS22295	0.23	+0.5
5,015,397	-		PFLU_RS22295	0.23	+2.9
5,015,576	+		PFLU_RS22295	0.34	-1.5
5,015,576	+		PFLU_RS22295	0.34	-2.3
5,015,576	+		PFLU_RS22295	0.34	+1.7
5,015,576	+		PFLU_RS22295	0.34	+0.4
5,015,576	+		PFLU_RS22295	0.34	-1.5
5,015,576	+		PFLU_RS22295	0.34	+0.3
5,015,576	+		PFLU_RS22295	0.34	+0.5
5,015,576	+		PFLU_RS22295	0.34	+1.8
5,015,576	+		PFLU_RS22295	0.34	-0.3
5,015,577	-		PFLU_RS22295	0.34	+1.6
5,015,577	-		PFLU_RS22295	0.34	-1.2
5,015,577	-		PFLU_RS22295	0.34	+1.3
5,015,577	-		PFLU_RS22295	0.34	+3.0
5,015,577	-		PFLU_RS22295	0.34	-0.7
5,015,577	-		PFLU_RS22295	0.34	-0.2
5,015,577	-		PFLU_RS22295	0.34	-1.6
5,015,577	-		PFLU_RS22295	0.34	-0.6
5,015,577	-		PFLU_RS22295	0.34	-2.1
5,015,577	-		PFLU_RS22295	0.34	-0.3
5,015,577	-		PFLU_RS22295	0.34	+1.9
5,015,577	-		PFLU_RS22295	0.34	+0.1
5,015,577	-		PFLU_RS22295	0.34	+1.8
5,015,577	-		PFLU_RS22295	0.34	-0.1
5,015,577	-		PFLU_RS22295	0.34	+3.2