Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21850

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
4,919,649	+		PFLU_RS21845	0.21	+3.4
4,919,650	-		PFLU_RS21845	0.21	+3.6
4,919,733	+		PFLU_RS21845	0.28	+3.4
4,919,734	-		PFLU_RS21845	0.28	+4.1
4,919,810	+		PFLU_RS21845	0.35	+4.1
4,919,811	-		PFLU_RS21845	0.35	+4.5
4,919,811	-		PFLU_RS21845	0.35	+4.3
4,919,811	-		PFLU_RS21845	0.35	+3.8
4,919,811	-		PFLU_RS21845	0.35	+4.3
4,919,811	-		PFLU_RS21845	0.35	+3.6
4,919,811	-		PFLU_RS21845	0.35	+4.5
4,919,811	-		PFLU_RS21845	0.35	+3.7
4,919,811	-		PFLU_RS21845	0.35	+3.4
4,920,022	-		PFLU_RS21845	0.54	+4.2
4,920,116	+		PFLU_RS21845	0.63	+2.7
4,920,117	-		PFLU_RS21845	0.63	+3.9
4,920,117	-		PFLU_RS21845	0.63	+4.4
4,920,132	+		PFLU_RS21845	0.64	+4.0
4,920,133	-		PFLU_RS21845	0.64	+3.2
4,920,133	-		PFLU_RS21845	0.64	+3.1
4,920,184	-		PFLU_RS21845	0.69	+4.2
4,920,184	-		PFLU_RS21845	0.69	+3.1
4,920,201	+		PFLU_RS21845	0.71	+3.5
4,920,202	-		PFLU_RS21845	0.71	+3.2
4,920,202	-		PFLU_RS21845	0.71	+4.4
4,920,301	+		PFLU_RS21845	0.80	+3.9
4,920,378	+		PFLU_RS21845	0.87	+4.5
4,920,536	+				+4.7
4,920,536	+				+4.1
4,920,536	+				+3.5
4,920,536	+				+4.6
4,920,536	+				+4.9
4,920,537	-				+0.6
4,920,537	-				+0.1
4,920,537	-				-0.7
4,920,537	-				+0.8
4,920,537	-				+2.6
4,920,537	-				+0.3
4,920,556	-				+3.5
4,920,609	+		PFLU_RS21850	0.11	+4.1
4,920,617	+		PFLU_RS21850	0.12	+2.9
4,920,617	+		PFLU_RS21850	0.12	+3.7
4,920,618	-		PFLU_RS21850	0.12	+4.1
4,920,618	-		PFLU_RS21850	0.12	+4.3
4,920,621	+		PFLU_RS21850	0.12	+4.7
4,920,621	+		PFLU_RS21850	0.12	+3.4
4,920,621	+		PFLU_RS21850	0.12	+3.7
4,920,622	-		PFLU_RS21850	0.12	+3.8
4,920,622	-		PFLU_RS21850	0.12	+2.6
4,920,657	+		PFLU_RS21850	0.18	+3.7
4,920,657	+		PFLU_RS21850	0.18	+3.7
4,920,658	-		PFLU_RS21850	0.18	+3.0
4,920,658	-		PFLU_RS21850	0.18	+3.1
4,920,723	+		PFLU_RS21850	0.27	+3.8
4,920,769	+		PFLU_RS21850	0.34	+3.0
4,920,770	-		PFLU_RS21850	0.34	+3.7
4,920,772	+		PFLU_RS21850	0.34	+3.8
4,920,772	+		PFLU_RS21850	0.34	+4.0
4,920,772	+		PFLU_RS21850	0.34	+3.8
4,920,772	+		PFLU_RS21850	0.34	+3.9
4,920,772	+		PFLU_RS21850	0.34	+4.3
4,920,772	+		PFLU_RS21850	0.34	+4.6
4,920,772	+		PFLU_RS21850	0.34	+4.2
4,920,772	+		PFLU_RS21850	0.34	+4.8
4,920,772	+		PFLU_RS21850	0.34	+3.3
4,920,772	+		PFLU_RS21850	0.34	+3.7
4,920,772	+		PFLU_RS21850	0.34	+3.6
4,920,772	+		PFLU_RS21850	0.34	+3.5
4,920,772	+		PFLU_RS21850	0.34	+3.8
4,920,772	+		PFLU_RS21850	0.34	+3.8
4,920,772	+		PFLU_RS21850	0.34	+3.5
4,920,772	+		PFLU_RS21850	0.34	+2.9
4,920,772	+		PFLU_RS21850	0.34	+3.5
4,920,772	+		PFLU_RS21850	0.34	+3.3
4,920,772	+		PFLU_RS21850	0.34	+2.5
4,920,772	+		PFLU_RS21850	0.34	+3.6
4,920,772	+		PFLU_RS21850	0.34	+3.6
4,920,772	+		PFLU_RS21850	0.34	+3.7
4,920,772	+		PFLU_RS21850	0.34	+3.5
4,920,772	+		PFLU_RS21850	0.34	+3.7
4,920,772	+		PFLU_RS21850	0.34	+2.9
4,920,773	-		PFLU_RS21850	0.34	+3.5
4,920,773	-		PFLU_RS21850	0.34	+3.2
4,920,773	-		PFLU_RS21850	0.34	+3.3
4,920,773	-		PFLU_RS21850	0.34	+4.0
4,920,773	-		PFLU_RS21850	0.34	+3.4
4,920,773	-		PFLU_RS21850	0.34	+3.5
4,920,773	-		PFLU_RS21850	0.34	+3.0
4,920,773	-		PFLU_RS21850	0.34	+3.5
4,920,773	-		PFLU_RS21850	0.34	+4.0
4,920,773	-		PFLU_RS21850	0.34	+3.1
4,920,773	-		PFLU_RS21850	0.34	+2.9
4,920,773	-		PFLU_RS21850	0.34	+3.8
4,920,773	-		PFLU_RS21850	0.34	+3.5
4,920,860	+		PFLU_RS21850	0.47	+4.3
4,920,860	+		PFLU_RS21850	0.47	+3.8
4,920,861	-		PFLU_RS21850	0.47	+1.3
4,920,861	-		PFLU_RS21850	0.47	+3.9
4,921,055	+		PFLU_RS21850	0.75	+4.2
4,921,056	-		PFLU_RS21850	0.75	+3.9
4,921,056	-		PFLU_RS21850	0.75	+3.4
4,921,056	-		PFLU_RS21850	0.75	+2.9
4,921,082	+		PFLU_RS21850	0.79	+3.8
4,921,082	+		PFLU_RS21850	0.79	+3.4
4,921,082	+		PFLU_RS21850	0.79	+3.2
4,921,082	+		PFLU_RS21850	0.79	+4.4
4,921,083	-		PFLU_RS21850	0.79	+4.1
4,921,083	-		PFLU_RS21850	0.79	+4.2
4,921,139	+		PFLU_RS21850	0.87	+4.3
4,921,139	+		PFLU_RS21850	0.87	+4.2
4,921,139	+		PFLU_RS21850	0.87	+3.6
4,921,139	+		PFLU_RS21850	0.87	+4.0
4,921,139	+		PFLU_RS21850	0.87	+3.2
4,921,139	+		PFLU_RS21850	0.87	+2.2
4,921,139	+		PFLU_RS21850	0.87	+2.1
4,921,139	+		PFLU_RS21850	0.87	+4.3
4,921,140	-		PFLU_RS21850	0.87	+3.3
4,921,142	+		PFLU_RS21850	0.87	+4.7
4,921,142	+		PFLU_RS21850	0.87	+4.8
4,921,142	+		PFLU_RS21850	0.87	+3.3
4,921,143	-		PFLU_RS21850	0.87	+4.6
4,921,143	-		PFLU_RS21850	0.87	+3.8
4,921,143	-		PFLU_RS21850	0.87	+3.7
4,921,221	-				+3.6
4,921,221	-				+3.7
4,921,221	-				+4.6
4,921,221	-				+2.8
4,921,221	-				+2.4
4,921,221	-				+2.0
4,921,237	+				+3.6
4,921,238	-				+2.7
4,921,238	-				+2.3
4,921,238	-				+4.2
4,921,283	+				+3.6
4,921,283	+				+3.5
4,921,284	-				+1.5
4,921,298	-				+4.0
4,921,349	+				+2.8
4,921,349	+				+3.7
4,921,350	-				+3.9
4,921,350	-				+4.0
4,921,362	+		PFLU_RS21855	0.10	+4.3
4,921,362	+		PFLU_RS21855	0.10	+4.3
4,921,504	-		PFLU_RS21855	0.28	+4.4
4,921,713	+		PFLU_RS21855	0.55	+2.0
4,921,713	+		PFLU_RS21855	0.55	+4.9
4,921,713	+		PFLU_RS21855	0.55	+3.6
4,921,714	-		PFLU_RS21855	0.55	+3.6
4,921,727	+		PFLU_RS21855	0.57	+4.7
4,921,727	+		PFLU_RS21855	0.57	+2.9
4,921,727	+		PFLU_RS21855	0.57	+3.0
4,921,728	-		PFLU_RS21855	0.57	+3.8
4,921,728	-		PFLU_RS21855	0.57	+3.5
4,921,728	-		PFLU_RS21855	0.57	+3.2
4,921,734	+		PFLU_RS21855	0.58	+3.6
4,921,734	+		PFLU_RS21855	0.58	+4.1
4,921,734	+		PFLU_RS21855	0.58	+2.7
4,921,734	+		PFLU_RS21855	0.58	+3.1
4,921,734	+		PFLU_RS21855	0.58	+3.8
4,921,735	-		PFLU_RS21855	0.58	+4.3
4,921,735	-		PFLU_RS21855	0.58	+3.7
4,921,735	-		PFLU_RS21855	0.58	+3.5
4,921,735	-		PFLU_RS21855	0.58	+3.3
4,921,735	-		PFLU_RS21855	0.58	+3.8
4,921,735	-		PFLU_RS21855	0.58	+3.6
4,921,735	-		PFLU_RS21855	0.58	+2.8
4,921,931	+		PFLU_RS21855	0.83	+1.7
4,921,931	+		PFLU_RS21855	0.83	+5.3
4,921,932	-		PFLU_RS21855	0.83	+3.9
4,921,932	-		PFLU_RS21855	0.83	+3.9
4,921,932	-		PFLU_RS21855	0.83	+4.4
4,921,932	-		PFLU_RS21855	0.83	+3.6
4,921,981	+		PFLU_RS21855	0.89	+3.8
4,921,981	+		PFLU_RS21855	0.89	+2.7
4,921,981	+		PFLU_RS21855	0.89	+3.2
4,921,981	+		PFLU_RS21855	0.89	+3.7
4,921,981	+		PFLU_RS21855	0.89	+3.9
4,921,981	+		PFLU_RS21855	0.89	+4.6
4,921,982	-		PFLU_RS21855	0.89	+3.5
4,921,982	-		PFLU_RS21855	0.89	+4.2
4,921,982	-		PFLU_RS21855	0.89	+4.1
4,921,982	-		PFLU_RS21855	0.89	+3.6
4,921,982	-		PFLU_RS21855	0.89	+3.9
4,922,054	-				+4.1
4,922,054	-				+4.5
4,922,054	-				+3.9
4,922,054	-				+3.8
4,922,113	+				+2.3
4,922,113	+				+2.0
4,922,113	+				+2.6
4,922,113	+				+3.2
4,922,114	-				-0.9
4,922,114	-				+2.9
4,922,114	-				+0.3
4,922,114	-				+1.8
4,922,114	-				-1.0
4,922,114	-				+2.4
4,922,117	+				+2.4
4,922,117	+				+3.1
4,922,118	-				-1.6
4,922,118	-				-1.7