Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17725

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
4,023,845	+				+0.3
4,023,845	+				+0.2
4,023,845	+				+0.0
4,023,845	+				+0.6
4,023,845	+				+3.8
4,023,845	+				+1.3
4,023,846	-				+1.2
4,023,846	-				+1.1
4,023,846	-				+1.3
4,023,846	-				-2.7
4,023,846	-				-0.6
4,023,867	-				-2.1
4,023,906	+				-1.2
4,023,907	-				+0.9
4,023,907	-				+0.5
4,023,907	-				-0.7
4,023,907	-				+1.1
4,023,907	-				-2.2
4,023,907	-				+1.8
4,023,907	-				+1.3
4,023,907	-				+0.5
4,023,907	-				-0.6
4,023,907	-				+1.4
4,023,907	-				-0.2
4,023,942	+				-2.3
4,023,943	-				-0.5
4,023,943	-				-3.2
4,023,949	+				+1.0
4,023,949	+				-1.1
4,024,092	+		PFLU_RS17720	0.12	+0.2
4,024,092	+		PFLU_RS17720	0.12	-1.7
4,024,092	+		PFLU_RS17720	0.12	+0.4
4,024,092	+		PFLU_RS17720	0.12	-2.9
4,024,092	+		PFLU_RS17720	0.12	-1.2
4,024,092	+		PFLU_RS17720	0.12	+4.2
4,024,092	+		PFLU_RS17720	0.12	-1.2
4,024,092	+		PFLU_RS17720	0.12	+2.6
4,024,092	+		PFLU_RS17720	0.12	-1.1
4,024,093	-		PFLU_RS17720	0.12	+2.4
4,024,093	-		PFLU_RS17720	0.12	-0.7
4,024,093	-		PFLU_RS17720	0.12	+1.5
4,024,093	-		PFLU_RS17720	0.12	+0.2
4,024,093	-		PFLU_RS17720	0.12	-2.8
4,024,093	-		PFLU_RS17720	0.12	+1.5
4,024,093	-		PFLU_RS17720	0.12	+0.5
4,024,093	-		PFLU_RS17720	0.12	-1.1
4,024,093	-		PFLU_RS17720	0.12	-0.2
4,024,093	-		PFLU_RS17720	0.12	+1.3
4,024,093	-		PFLU_RS17720	0.12	+0.4
4,024,093	-		PFLU_RS17720	0.12	+0.1
4,024,093	-		PFLU_RS17720	0.12	+1.1
4,024,093	-		PFLU_RS17720	0.12	+0.1
4,024,149	+		PFLU_RS17720	0.18	-0.7
4,024,149	+		PFLU_RS17720	0.18	+2.8
4,024,149	+		PFLU_RS17720	0.18	+0.5
4,024,149	+		PFLU_RS17720	0.18	-0.7
4,024,149	+		PFLU_RS17720	0.18	-1.5
4,024,149	+		PFLU_RS17720	0.18	-1.5
4,024,149	+		PFLU_RS17720	0.18	-2.0
4,024,149	+		PFLU_RS17720	0.18	-1.5
4,024,149	+		PFLU_RS17720	0.18	-2.0
4,024,150	-		PFLU_RS17720	0.19	-0.5
4,024,150	-		PFLU_RS17720	0.19	+0.8
4,024,150	-		PFLU_RS17720	0.19	-0.4
4,024,150	-		PFLU_RS17720	0.19	-0.1
4,024,150	-		PFLU_RS17720	0.19	-1.7
4,024,150	-		PFLU_RS17720	0.19	+2.7
4,024,150	-		PFLU_RS17720	0.19	-0.1
4,024,152	+		PFLU_RS17720	0.19	+0.6
4,024,152	+		PFLU_RS17720	0.19	+0.1
4,024,152	+		PFLU_RS17720	0.19	+0.4
4,024,153	-		PFLU_RS17720	0.19	+0.1
4,024,158	+		PFLU_RS17720	0.19	-2.3
4,024,159	-		PFLU_RS17720	0.20	-0.6
4,024,257	+		PFLU_RS17720	0.31	+1.2
4,024,257	+		PFLU_RS17720	0.31	-1.9
4,024,258	-		PFLU_RS17720	0.31	-1.4
4,024,258	-		PFLU_RS17720	0.31	-2.6
4,024,269	+		PFLU_RS17720	0.32	-0.9
4,024,269	+		PFLU_RS17720	0.32	+0.1
4,024,270	-		PFLU_RS17720	0.32	+0.9
4,024,297	+		PFLU_RS17720	0.35	-1.0
4,024,297	+		PFLU_RS17720	0.35	+0.0
4,024,297	+		PFLU_RS17720	0.35	+2.9
4,024,298	-		PFLU_RS17720	0.35	+1.7
4,024,298	-		PFLU_RS17720	0.35	-1.7
4,024,298	-		PFLU_RS17720	0.35	-2.4
4,024,298	-		PFLU_RS17720	0.35	-0.6
4,024,375	-		PFLU_RS17720	0.44	+2.5
4,024,375	-		PFLU_RS17720	0.44	+0.5
4,024,375	-		PFLU_RS17720	0.44	-2.2
4,024,395	+		PFLU_RS17720	0.46	+0.9
4,024,396	-		PFLU_RS17720	0.46	+1.3
4,024,455	+		PFLU_RS17720	0.53	-0.1
4,024,455	+		PFLU_RS17720	0.53	-0.1
4,024,456	-		PFLU_RS17720	0.53	+2.1
4,024,456	-		PFLU_RS17720	0.53	+1.7
4,024,456	-		PFLU_RS17720	0.53	-2.5
4,024,456	-		PFLU_RS17720	0.53	+3.4
4,024,456	-		PFLU_RS17720	0.53	+0.3
4,024,456	-		PFLU_RS17720	0.53	+0.1
4,024,468	+		PFLU_RS17720	0.54	-2.5
4,024,468	+		PFLU_RS17720	0.54	-0.3
4,024,468	+		PFLU_RS17720	0.54	+2.0
4,024,468	+		PFLU_RS17720	0.54	-2.2
4,024,469	-		PFLU_RS17720	0.54	+1.6
4,024,517	+		PFLU_RS17720	0.60	+0.5
4,024,517	+		PFLU_RS17720	0.60	-2.8
4,024,518	-		PFLU_RS17720	0.60	-1.0
4,024,518	-		PFLU_RS17720	0.60	+1.4
4,024,518	-		PFLU_RS17720	0.60	-0.5
4,024,518	-		PFLU_RS17720	0.60	+0.8
4,024,518	-		PFLU_RS17720	0.60	+1.2
4,024,539	+		PFLU_RS17720	0.62	+0.4
4,024,539	+		PFLU_RS17720	0.62	+0.8
4,024,539	+		PFLU_RS17720	0.62	+0.1
4,024,539	+		PFLU_RS17720	0.62	-0.3
4,024,539	+		PFLU_RS17720	0.62	+0.0
4,024,539	+		PFLU_RS17720	0.62	-1.6
4,024,540	-		PFLU_RS17720	0.62	-3.1
4,024,540	-		PFLU_RS17720	0.62	+1.9
4,024,540	-		PFLU_RS17720	0.62	+1.4
4,024,540	-		PFLU_RS17720	0.62	-2.5
4,024,540	-		PFLU_RS17720	0.62	-0.7
4,024,540	-		PFLU_RS17720	0.62	-1.7
4,024,612	-		PFLU_RS17720	0.70	+0.8
4,024,635	+		PFLU_RS17720	0.73	-0.9
4,024,635	+		PFLU_RS17720	0.73	-1.1
4,024,636	-		PFLU_RS17720	0.73	+0.0
4,024,636	-		PFLU_RS17720	0.73	-1.5
4,024,636	-		PFLU_RS17720	0.73	+0.8
4,024,638	+		PFLU_RS17720	0.73	-1.2
4,024,807	-				+0.8
4,024,831	+				-0.9
4,024,831	+				+0.3
4,024,831	+				-2.1
4,024,831	+				+1.3
4,024,831	+				+1.6
4,024,831	+				+0.9
4,024,831	+				-1.2
4,024,831	+				-1.3
4,024,831	+				+0.1
4,024,831	+				-0.3
4,024,832	-				+0.7
4,024,832	-				-2.7
4,024,832	-				+1.3
4,024,832	-				+2.6
4,024,832	-				-1.5
4,024,832	-				-2.1
4,024,832	-				-2.6
4,024,832	-				+3.1
4,024,835	+				-1.7
4,024,835	+				-1.6
4,024,907	+		PFLU_RS17725	0.15	+0.7
4,024,932	-		PFLU_RS17725	0.19	-1.5
4,024,955	+		PFLU_RS17725	0.23	-2.3
4,024,955	+		PFLU_RS17725	0.23	-3.2
4,024,956	-		PFLU_RS17725	0.23	-0.6
4,024,970	+		PFLU_RS17725	0.26	-0.1
4,024,970	+		PFLU_RS17725	0.26	-0.3
4,024,970	+		PFLU_RS17725	0.26	+1.1
4,024,970	+		PFLU_RS17725	0.26	+0.9
4,024,971	-		PFLU_RS17725	0.26	-1.6
4,024,971	-		PFLU_RS17725	0.26	-0.6
4,024,971	-		PFLU_RS17725	0.26	-1.1
4,024,971	-		PFLU_RS17725	0.26	-2.5
4,024,971	-		PFLU_RS17725	0.26	-0.6
4,024,971	-		PFLU_RS17725	0.26	-2.5
4,024,971	-		PFLU_RS17725	0.26	-0.5
4,025,084	+		PFLU_RS17725	0.45	-1.1
4,025,084	+		PFLU_RS17725	0.45	-0.2
4,025,084	+		PFLU_RS17725	0.45	-2.5
4,025,085	-		PFLU_RS17725	0.45	-0.8
4,025,159	+		PFLU_RS17725	0.58	-0.2
4,025,159	+		PFLU_RS17725	0.58	-1.4
4,025,159	+		PFLU_RS17725	0.58	+1.1
4,025,159	+		PFLU_RS17725	0.58	+0.5
4,025,159	+		PFLU_RS17725	0.58	+0.0
4,025,160	-		PFLU_RS17725	0.58	-1.1
4,025,160	-		PFLU_RS17725	0.58	+1.6
4,025,160	-		PFLU_RS17725	0.58	+2.3
4,025,160	-		PFLU_RS17725	0.58	-0.7
4,025,160	-		PFLU_RS17725	0.58	-0.4
4,025,160	-		PFLU_RS17725	0.58	-0.4
4,025,160	-		PFLU_RS17725	0.58	+0.3
4,025,160	-		PFLU_RS17725	0.58	+2.0
4,025,160	-		PFLU_RS17725	0.58	+0.9
4,025,160	-		PFLU_RS17725	0.58	-1.9
4,025,518	+				+1.7
4,025,518	+				-1.5
4,025,518	+				-1.4
4,025,518	+				+0.3
4,025,518	+				-1.7
4,025,518	+				-1.5
4,025,518	+				-0.2
4,025,518	+				+1.0
4,025,518	+				-0.8
4,025,519	-				-0.4
4,025,519	-				-0.0
4,025,519	-				-0.7
4,025,519	-				+0.8
4,025,519	-				-2.1
4,025,519	-				-0.7
4,025,520	+				-0.0
4,025,520	+				-0.9
4,025,520	+				-1.5
4,025,521	-				-2.3
4,025,521	-				-1.4
4,025,521	-				+1.0
4,025,521	-				-2.5
4,025,570	+				+0.6
4,025,571	-				+0.2
4,025,571	-				-1.1
4,025,575	-				+0.4
4,025,575	-				-0.4
4,025,594	+				-1.6
4,025,595	-				+1.5
4,025,595	-				+0.5
4,025,595	-				-1.1
4,025,621	+				+0.5
4,025,621	+				+0.2
4,025,622	-				+0.1
4,025,622	-				+2.5
4,025,622	-				-2.7
4,025,622	-				-0.4
4,025,793	+		PFLU_RS17730	0.17	-1.4
4,025,793	+		PFLU_RS17730	0.17	-1.9
4,025,794	-		PFLU_RS17730	0.18	-1.4
4,025,794	-		PFLU_RS17730	0.18	-1.0
4,025,794	-		PFLU_RS17730	0.18	+1.6
4,025,794	-		PFLU_RS17730	0.18	+0.6
4,025,794	-		PFLU_RS17730	0.18	-0.1
4,025,796	+		PFLU_RS17730	0.18	+0.2
4,025,796	+		PFLU_RS17730	0.18	+3.3
4,025,797	-		PFLU_RS17730	0.18	-1.1
4,025,797	-		PFLU_RS17730	0.18	-0.6
4,025,797	-		PFLU_RS17730	0.18	-1.1
4,025,797	-		PFLU_RS17730	0.18	+0.4
4,025,797	-		PFLU_RS17730	0.18	-0.5
4,025,797	-		PFLU_RS17730	0.18	-0.4
4,025,797	-		PFLU_RS17730	0.18	-0.7
4,025,962	-		PFLU_RS17730	0.37	-1.2
4,026,174	-		PFLU_RS17730	0.63	-0.5
4,026,195	+		PFLU_RS17730	0.65	-0.6
4,026,196	-		PFLU_RS17730	0.65	+1.1
4,026,225	+		PFLU_RS17730	0.69	+2.4
4,026,225	+		PFLU_RS17730	0.69	-1.6
4,026,254	+		PFLU_RS17730	0.72	-1.1
4,026,254	+		PFLU_RS17730	0.72	-0.8
4,026,254	+		PFLU_RS17730	0.72	-0.7
4,026,254	+		PFLU_RS17730	0.72	-1.4
4,026,254	+		PFLU_RS17730	0.72	+1.5
4,026,254	+		PFLU_RS17730	0.72	-1.2
4,026,254	+		PFLU_RS17730	0.72	+1.7
4,026,254	+		PFLU_RS17730	0.72	+1.1
4,026,254	+		PFLU_RS17730	0.72	+1.3
4,026,254	+		PFLU_RS17730	0.72	+0.5
4,026,254	+		PFLU_RS17730	0.72	-0.2
4,026,254	+		PFLU_RS17730	0.72	+0.4
4,026,254	+		PFLU_RS17730	0.72	+1.0
4,026,255	-		PFLU_RS17730	0.72	+0.8
4,026,255	-		PFLU_RS17730	0.72	-1.9
4,026,255	-		PFLU_RS17730	0.72	+0.6
4,026,255	-		PFLU_RS17730	0.72	-0.4
4,026,255	-		PFLU_RS17730	0.72	+2.9
4,026,255	-		PFLU_RS17730	0.72	+0.8
4,026,255	-		PFLU_RS17730	0.72	+0.5
4,026,255	-		PFLU_RS17730	0.72	-2.0
4,026,311	+		PFLU_RS17730	0.79	+0.2
4,026,311	+		PFLU_RS17730	0.79	-0.7
4,026,312	-		PFLU_RS17730	0.79	-0.4
4,026,312	-		PFLU_RS17730	0.79	-1.2
4,026,366	+		PFLU_RS17730	0.85	+1.9
4,026,366	+		PFLU_RS17730	0.85	-0.4
4,026,366	+		PFLU_RS17730	0.85	+0.6
4,026,366	+		PFLU_RS17730	0.85	+1.8
4,026,366	+		PFLU_RS17730	0.85	+0.7
4,026,366	+		PFLU_RS17730	0.85	-2.2
4,026,366	+		PFLU_RS17730	0.85	-2.6
4,026,366	+		PFLU_RS17730	0.85	-2.1
4,026,366	+		PFLU_RS17730	0.85	+1.2
4,026,366	+		PFLU_RS17730	0.85	+2.8
4,026,367	-		PFLU_RS17730	0.86	-0.5
4,026,367	-		PFLU_RS17730	0.86	-0.8
4,026,367	-		PFLU_RS17730	0.86	-1.1
4,026,367	-		PFLU_RS17730	0.86	-0.2
4,026,367	-		PFLU_RS17730	0.86	+1.4
4,026,367	-		PFLU_RS17730	0.86	+2.7
4,026,367	-		PFLU_RS17730	0.86	-0.2
4,026,367	-		PFLU_RS17730	0.86	+2.5
4,026,367	-		PFLU_RS17730	0.86	+1.0
4,026,367	-		PFLU_RS17730	0.86	+0.5