Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13550

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
3,067,378	+				-0.6
3,067,378	+				-0.4
3,067,378	+				+1.8
3,067,378	+				-0.3
3,067,378	+				-0.5
3,067,378	+				-1.5
3,067,378	+				-1.6
3,067,378	+				-1.3
3,067,378	+				-0.4
3,067,378	+				-0.3
3,067,378	+				+0.3
3,067,378	+				-0.2
3,067,378	+				+0.0
3,067,378	+				+1.6
3,067,379	-				-1.9
3,067,379	-				+1.8
3,067,379	-				-0.3
3,067,379	-				-2.1
3,067,379	-				+0.2
3,067,379	-				+1.5
3,067,379	-				+0.2
3,067,379	-				-1.6
3,067,379	-				-2.0
3,067,379	-				+3.2
3,067,379	-				-0.2
3,067,379	-				-1.1
3,067,379	-				-1.8
3,067,379	-				+3.7
3,067,379	-				-3.0
3,067,379	-				-0.6
3,067,432	+				-0.5
3,067,433	-				-0.8
3,067,507	+				+1.9
3,067,507	+				-2.0
3,067,516	+				+1.1
3,067,517	-				+0.6
3,067,517	-				+2.9
3,067,517	-				-1.1
3,067,517	-				+0.7
3,067,534	+				-0.8
3,067,534	+				+1.2
3,067,534	+				-0.7
3,067,535	-				-1.2
3,067,535	-				-0.9
3,067,593	+		PFLU_RS13545	0.15	-1.7
3,067,593	+		PFLU_RS13545	0.15	-0.3
3,067,593	+		PFLU_RS13545	0.15	-1.4
3,067,593	+		PFLU_RS13545	0.15	-1.4
3,067,593	+		PFLU_RS13545	0.15	-0.3
3,067,593	+		PFLU_RS13545	0.15	-2.6
3,067,593	+		PFLU_RS13545	0.15	+1.0
3,067,593	+		PFLU_RS13545	0.15	+1.0
3,067,594	-		PFLU_RS13545	0.16	+1.8
3,067,594	-		PFLU_RS13545	0.16	+1.3
3,067,594	-		PFLU_RS13545	0.16	+2.4
3,067,594	-		PFLU_RS13545	0.16	+2.2
3,067,594	-		PFLU_RS13545	0.16	-2.1
3,067,594	-		PFLU_RS13545	0.16	+3.6
3,067,594	-		PFLU_RS13545	0.16	+4.2
3,067,594	-		PFLU_RS13545	0.16	+3.3
3,067,594	-		PFLU_RS13545	0.16	+2.3
3,067,594	-		PFLU_RS13545	0.16	-0.3
3,067,714	+		PFLU_RS13545	0.37	+0.0
3,067,715	-		PFLU_RS13545	0.37	-1.8
3,067,715	-		PFLU_RS13545	0.37	+0.2
3,067,715	-		PFLU_RS13545	0.37	+0.4
3,067,715	-		PFLU_RS13545	0.37	-2.3
3,067,963	+		PFLU_RS13545	0.81	+0.1
3,067,964	-		PFLU_RS13545	0.81	-0.4
3,067,964	-		PFLU_RS13545	0.81	-1.8
3,068,008	+		PFLU_RS13545	0.89	+1.1
3,068,009	-		PFLU_RS13545	0.89	+1.4
3,068,075	+				+0.9
3,068,076	-				+1.1
3,068,082	+				-1.9
3,068,083	-				+0.2
3,068,113	-				-0.5
3,068,145	+				-1.0
3,068,145	+				+0.1
3,068,146	-				-2.9
3,068,281	+				+0.8
3,068,281	+				+0.5
3,068,281	+				-1.3
3,068,282	-				-2.7
3,068,330	+				+0.8
3,068,330	+				-1.8
3,068,330	+				+2.0
3,068,330	+				-2.3
3,068,330	+				-1.2
3,068,330	+				-0.3
3,068,331	-				+0.0
3,068,331	-				+0.6
3,068,331	-				-1.0
3,068,331	-				-0.1
3,068,331	-				-2.1
3,068,331	-				+1.3
3,068,331	-				+0.2
3,068,331	-				-1.7
3,068,332	+				+0.7
3,068,332	+				-1.2
3,068,332	+				+1.2
3,068,332	+				+0.7
3,068,332	+				-1.4
3,068,332	+				+0.4
3,068,332	+				+0.7
3,068,332	+				+0.7
3,068,333	-				-0.1
3,068,333	-				-2.2
3,068,333	-				+0.4
3,068,333	-				-0.0
3,068,333	-				-2.9
3,068,333	-				-1.2
3,068,333	-				-1.8
3,068,333	-				+1.2
3,068,333	-				-2.3
3,068,888	+		PFLU_RS13550	0.63	-0.8
3,068,888	+		PFLU_RS13550	0.63	-0.0
3,068,889	-		PFLU_RS13550	0.64	-2.1
3,068,889	-		PFLU_RS13550	0.64	+0.1
3,068,889	-		PFLU_RS13550	0.64	-0.7
3,069,050	+		PFLU_RS13550	0.83	+1.8
3,069,050	+		PFLU_RS13550	0.83	+0.8
3,069,050	+		PFLU_RS13550	0.83	-0.1
3,069,050	+		PFLU_RS13550	0.83	-1.6
3,069,050	+		PFLU_RS13550	0.83	+1.1
3,069,050	+		PFLU_RS13550	0.83	+1.5
3,069,050	+		PFLU_RS13550	0.83	+0.6
3,069,050	+		PFLU_RS13550	0.83	+2.3
3,069,050	+		PFLU_RS13550	0.83	-1.0
3,069,050	+		PFLU_RS13550	0.83	+1.6
3,069,051	-		PFLU_RS13550	0.84	-3.0
3,069,051	-		PFLU_RS13550	0.84	+1.8
3,069,051	-		PFLU_RS13550	0.84	-0.9
3,069,051	-		PFLU_RS13550	0.84	+0.2
3,069,051	-		PFLU_RS13550	0.84	+0.7
3,069,051	-		PFLU_RS13550	0.84	+0.1
3,069,051	-		PFLU_RS13550	0.84	-1.8
3,069,051	-		PFLU_RS13550	0.84	-1.2
3,069,051	-		PFLU_RS13550	0.84	+1.6
3,069,064	+		PFLU_RS13550	0.85	-1.8
3,069,064	+		PFLU_RS13550	0.85	+1.4
3,069,064	+		PFLU_RS13550	0.85	-2.1
3,069,065	-		PFLU_RS13550	0.85	-2.3
3,069,086	+		PFLU_RS13550	0.88	+1.1
3,069,086	+		PFLU_RS13550	0.88	-1.9
3,069,086	+		PFLU_RS13550	0.88	-0.4
3,069,086	+		PFLU_RS13550	0.88	-0.9
3,069,086	+		PFLU_RS13550	0.88	-1.7
3,069,086	+		PFLU_RS13550	0.88	-0.8
3,069,087	-		PFLU_RS13550	0.88	+1.8
3,069,087	-		PFLU_RS13550	0.88	-2.3
3,069,087	-		PFLU_RS13550	0.88	-1.9
3,069,087	-		PFLU_RS13550	0.88	+0.1
3,069,087	-		PFLU_RS13550	0.88	-1.4
3,069,109	+				+0.8
3,069,109	+				-2.3
3,069,110	-				+1.9
3,069,110	-				-0.3
3,069,110	-				-1.9
3,069,110	-				+1.3
3,069,151	+				+1.3
3,069,152	-				-1.9
3,069,152	-				-1.7
3,069,152	-				+1.0
3,069,158	-				-1.3
3,069,158	-				+0.5
3,069,207	+				+2.5
3,069,207	+				+0.9
3,069,315	+		PFLU_RS13555	0.15	-0.3
3,069,316	-		PFLU_RS13555	0.15	+0.3
3,069,379	+		PFLU_RS13555	0.23	+1.5
3,069,379	+		PFLU_RS13555	0.23	-0.8
3,069,380	-		PFLU_RS13555	0.23	+1.4
3,069,380	-		PFLU_RS13555	0.23	-1.6
3,069,380	-		PFLU_RS13555	0.23	-1.2
3,069,469	+		PFLU_RS13555	0.33	-0.1
3,069,469	+		PFLU_RS13555	0.33	-1.8
3,069,469	+		PFLU_RS13555	0.33	+0.0
3,069,469	+		PFLU_RS13555	0.33	+1.7
3,069,469	+		PFLU_RS13555	0.33	-1.7
3,069,470	-		PFLU_RS13555	0.34	+1.5
3,069,470	-		PFLU_RS13555	0.34	+1.7
3,069,470	-		PFLU_RS13555	0.34	-2.7
3,069,501	+		PFLU_RS13555	0.37	-0.9
3,069,501	+		PFLU_RS13555	0.37	+0.1
3,069,577	+		PFLU_RS13555	0.46	-2.4
3,069,577	+		PFLU_RS13555	0.46	+1.6
3,069,577	+		PFLU_RS13555	0.46	+0.3
3,069,577	+		PFLU_RS13555	0.46	-1.9
3,069,578	-		PFLU_RS13555	0.47	+1.0
3,069,578	-		PFLU_RS13555	0.47	-2.5
3,069,578	-		PFLU_RS13555	0.47	+2.4
3,069,578	-		PFLU_RS13555	0.47	+1.5
3,069,578	-		PFLU_RS13555	0.47	-1.6
3,069,578	-		PFLU_RS13555	0.47	-0.1
3,069,578	-		PFLU_RS13555	0.47	-1.1
3,069,578	-		PFLU_RS13555	0.47	-1.8
3,069,578	-		PFLU_RS13555	0.47	-1.6
3,069,604	+		PFLU_RS13555	0.50	+4.5
3,069,694	+		PFLU_RS13555	0.60	+0.3
3,069,694	+		PFLU_RS13555	0.60	-2.5
3,069,694	+		PFLU_RS13555	0.60	-2.7
3,069,694	+		PFLU_RS13555	0.60	-1.2
3,069,694	+		PFLU_RS13555	0.60	-1.5
3,069,694	+		PFLU_RS13555	0.60	-0.8
3,069,694	+		PFLU_RS13555	0.60	-1.4
3,069,694	+		PFLU_RS13555	0.60	-1.2
3,069,694	+		PFLU_RS13555	0.60	-0.8
3,069,694	+		PFLU_RS13555	0.60	-2.9
3,069,694	+		PFLU_RS13555	0.60	+1.1
3,069,694	+		PFLU_RS13555	0.60	-1.4
3,069,695	-		PFLU_RS13555	0.61	-2.2
3,069,695	-		PFLU_RS13555	0.61	+0.3
3,069,695	-		PFLU_RS13555	0.61	+1.5
3,069,695	-		PFLU_RS13555	0.61	+2.5
3,069,695	-		PFLU_RS13555	0.61	-1.3
3,069,695	-		PFLU_RS13555	0.61	-0.3
3,069,796	+		PFLU_RS13555	0.73	+0.2
3,069,796	+		PFLU_RS13555	0.73	+0.2
3,069,796	+		PFLU_RS13555	0.73	-2.6
3,069,796	+		PFLU_RS13555	0.73	+3.8
3,069,796	+		PFLU_RS13555	0.73	-1.6
3,069,796	+		PFLU_RS13555	0.73	+0.1
3,069,796	+		PFLU_RS13555	0.73	-1.3
3,069,796	+		PFLU_RS13555	0.73	+2.7
3,069,796	+		PFLU_RS13555	0.73	-0.5
3,069,796	+		PFLU_RS13555	0.73	-1.2
3,069,797	-		PFLU_RS13555	0.73	+0.9
3,069,797	-		PFLU_RS13555	0.73	-0.6
3,069,797	-		PFLU_RS13555	0.73	-1.7
3,069,797	-		PFLU_RS13555	0.73	+0.1
3,069,797	-		PFLU_RS13555	0.73	-0.2
3,069,797	-		PFLU_RS13555	0.73	+0.9
3,069,797	-		PFLU_RS13555	0.73	-1.6
3,069,797	-		PFLU_RS13555	0.73	-1.3
3,069,797	-		PFLU_RS13555	0.73	+2.3
3,069,797	-		PFLU_RS13555	0.73	+0.1
3,069,797	-		PFLU_RS13555	0.73	-1.1
3,069,797	-		PFLU_RS13555	0.73	+3.2
3,069,797	-		PFLU_RS13555	0.73	+2.1
3,069,797	-		PFLU_RS13555	0.73	-2.0
3,069,797	-		PFLU_RS13555	0.73	-3.1
3,069,797	-		PFLU_RS13555	0.73	-0.7
3,069,797	-		PFLU_RS13555	0.73	-1.9
3,069,857	-		PFLU_RS13555	0.80	-0.9
3,069,961	+				+1.0
3,069,962	-				+0.3
3,069,976	+				-0.8
3,069,976	+				+2.5
3,069,977	-				-1.2
3,069,977	-				-0.1
3,070,176	+		PFLU_RS13560	0.24	-0.9
3,070,177	-		PFLU_RS13560	0.24	-3.1
3,070,177	-		PFLU_RS13560	0.24	-0.6