Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09850

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
2,166,633	+		PFLU_RS09840	0.18	+1.1
2,166,633	+		PFLU_RS09840	0.18	-1.2
2,166,634	-		PFLU_RS09840	0.19	+0.4
2,166,634	-		PFLU_RS09840	0.19	+1.5
2,166,634	-		PFLU_RS09840	0.19	-0.7
2,166,634	-		PFLU_RS09840	0.19	-0.3
2,166,634	-		PFLU_RS09840	0.19	-0.7
2,166,844	+		PFLU_RS09840	0.46	+2.4
2,166,844	+		PFLU_RS09840	0.46	-1.1
2,166,844	+		PFLU_RS09840	0.46	+1.6
2,166,844	+		PFLU_RS09840	0.46	+0.6
2,166,844	+		PFLU_RS09840	0.46	+0.5
2,166,844	+		PFLU_RS09840	0.46	-1.8
2,166,844	+		PFLU_RS09840	0.46	+2.0
2,166,844	+		PFLU_RS09840	0.46	+1.0
2,166,844	+		PFLU_RS09840	0.46	-2.3
2,166,844	+		PFLU_RS09840	0.46	-1.8
2,166,844	+		PFLU_RS09840	0.46	+1.9
2,166,844	+		PFLU_RS09840	0.46	-1.7
2,166,844	+		PFLU_RS09840	0.46	-0.4
2,166,844	+		PFLU_RS09840	0.46	+1.6
2,166,844	+		PFLU_RS09840	0.46	+0.9
2,166,844	+		PFLU_RS09840	0.46	-1.1
2,166,845	-		PFLU_RS09840	0.46	-2.5
2,166,845	-		PFLU_RS09840	0.46	+2.6
2,166,845	-		PFLU_RS09840	0.46	-2.0
2,166,845	-		PFLU_RS09840	0.46	+2.2
2,166,845	-		PFLU_RS09840	0.46	-1.0
2,166,845	-		PFLU_RS09840	0.46	+0.1
2,166,846	+		PFLU_RS09840	0.47	-0.4
2,166,846	+		PFLU_RS09840	0.47	-0.7
2,166,846	+		PFLU_RS09840	0.47	-0.5
2,166,846	+		PFLU_RS09840	0.47	-2.3
2,166,846	+		PFLU_RS09840	0.47	+0.9
2,166,846	+		PFLU_RS09840	0.47	-0.5
2,166,846	+		PFLU_RS09840	0.47	-2.0
2,166,846	+		PFLU_RS09840	0.47	+0.3
2,166,847	-		PFLU_RS09840	0.47	+3.1
2,166,847	-		PFLU_RS09840	0.47	+0.8
2,166,847	-		PFLU_RS09840	0.47	-2.1
2,166,847	-		PFLU_RS09840	0.47	+0.1
2,166,847	-		PFLU_RS09840	0.47	-1.0
2,166,847	-		PFLU_RS09840	0.47	+0.6
2,166,847	-		PFLU_RS09840	0.47	-1.3
2,166,847	-		PFLU_RS09840	0.47	-2.0
2,166,847	-		PFLU_RS09840	0.47	+0.9
2,166,847	-		PFLU_RS09840	0.47	-1.8
2,166,847	-		PFLU_RS09840	0.47	+2.4
2,166,925	+		PFLU_RS09840	0.57	+1.1
2,166,925	+		PFLU_RS09840	0.57	-0.4
2,166,925	+		PFLU_RS09840	0.57	-1.8
2,166,925	+		PFLU_RS09840	0.57	+0.7
2,166,925	+		PFLU_RS09840	0.57	-0.0
2,166,925	+		PFLU_RS09840	0.57	+0.8
2,166,926	-		PFLU_RS09840	0.57	-0.9
2,166,926	-		PFLU_RS09840	0.57	+1.0
2,166,926	-		PFLU_RS09840	0.57	-1.6
2,166,926	-		PFLU_RS09840	0.57	+1.4
2,166,926	-		PFLU_RS09840	0.57	-2.8
2,166,926	-		PFLU_RS09840	0.57	-0.5
2,166,944	+		PFLU_RS09840	0.59	+0.5
2,166,961	-		PFLU_RS09840	0.62	+0.7
2,166,994	+		PFLU_RS09840	0.66	-0.9
2,166,994	+		PFLU_RS09840	0.66	+0.1
2,166,995	-		PFLU_RS09840	0.66	+1.6
2,167,054	+		PFLU_RS09840	0.74	-2.1
2,167,055	-		PFLU_RS09840	0.74	+3.0
2,167,253	-				+0.3
2,167,253	-				+1.5
2,167,253	-				-0.6
2,167,256	-				-1.0
2,167,256	-				+1.8
2,167,256	-				-1.8
2,167,256	-				+1.1
2,167,256	-				+0.4
2,167,256	-				-0.1
2,167,319	+				-0.5
2,167,319	+				+0.7
2,167,320	-				-1.4
2,167,320	-				-0.6
2,167,320	-				+2.0
2,167,320	-				+2.0
2,167,320	-				+2.0
2,167,325	+				+1.5
2,167,325	+				+1.9
2,167,325	+				-0.3
2,167,325	+				+0.8
2,167,326	-				+0.1
2,167,326	-				+0.3
2,167,326	-				-0.4
2,167,326	-				-0.3
2,167,326	-				+0.1
2,167,360	+				-1.3
2,167,360	+				-3.0
2,167,360	+				+2.1
2,167,360	+				-1.0
2,167,360	+				+3.1
2,167,360	+				-2.5
2,167,360	+				+0.7
2,167,360	+				-2.8
2,167,360	+				+0.7
2,167,360	+				-0.6
2,167,360	+				-1.2
2,167,360	+				+0.2
2,167,360	+				+1.0
2,167,361	-				+1.2
2,167,361	-				-1.1
2,167,361	-				+0.9
2,167,361	-				-1.7
2,167,361	-				-1.3
2,167,361	-				+0.1
2,167,361	-				-0.3
2,167,361	-				-1.2
2,167,361	-				+0.6
2,167,361	-				-1.5
2,167,361	-				-2.1
2,167,361	-				-2.9
2,167,386	+		PFLU_RS09845	0.17	+0.2
2,167,472	+		PFLU_RS09845	0.52	-1.1
2,167,472	+		PFLU_RS09845	0.52	-0.1
2,167,472	+		PFLU_RS09845	0.52	-1.1
2,167,473	-		PFLU_RS09845	0.52	-0.4
2,167,786	+		PFLU_RS09850	0.14	+0.1
2,167,786	+		PFLU_RS09850	0.14	-0.3
2,167,787	-		PFLU_RS09850	0.14	-0.5
2,167,852	+		PFLU_RS09850	0.18	+2.5
2,168,109	+		PFLU_RS09850	0.37	+0.4
2,168,110	-		PFLU_RS09850	0.37	-1.9
2,168,200	+		PFLU_RS09850	0.44	-2.0
2,168,200	+		PFLU_RS09850	0.44	-0.3
2,168,201	-		PFLU_RS09850	0.44	+0.1
2,168,201	-		PFLU_RS09850	0.44	+0.2
2,168,201	-		PFLU_RS09850	0.44	-1.1
2,168,407	+		PFLU_RS09850	0.59	+0.1
2,168,408	-		PFLU_RS09850	0.59	+0.8
2,168,431	+		PFLU_RS09850	0.60	-1.3
2,168,431	+		PFLU_RS09850	0.60	-0.1
2,168,431	+		PFLU_RS09850	0.60	+1.3
2,168,432	-		PFLU_RS09850	0.61	-1.7
2,168,432	-		PFLU_RS09850	0.61	+1.4
2,168,432	-		PFLU_RS09850	0.61	+3.4
2,168,432	-		PFLU_RS09850	0.61	-2.2
2,168,432	-		PFLU_RS09850	0.61	-1.4
2,168,432	-		PFLU_RS09850	0.61	-1.2
2,168,432	-		PFLU_RS09850	0.61	-0.3
2,168,432	-		PFLU_RS09850	0.61	+2.2
2,168,432	-		PFLU_RS09850	0.61	+1.2
2,168,432	-		PFLU_RS09850	0.61	-1.9
2,168,435	+		PFLU_RS09850	0.61	-1.9
2,168,435	+		PFLU_RS09850	0.61	+1.2
2,168,435	+		PFLU_RS09850	0.61	+1.5
2,168,435	+		PFLU_RS09850	0.61	+0.3
2,168,435	+		PFLU_RS09850	0.61	-1.9
2,168,435	+		PFLU_RS09850	0.61	-0.7
2,168,435	+		PFLU_RS09850	0.61	-1.5
2,168,435	+		PFLU_RS09850	0.61	-1.6
2,168,435	+		PFLU_RS09850	0.61	+0.6
2,168,435	+		PFLU_RS09850	0.61	+2.5
2,168,435	+		PFLU_RS09850	0.61	-1.0
2,168,435	+		PFLU_RS09850	0.61	+3.6
2,168,435	+		PFLU_RS09850	0.61	-0.2
2,168,435	+		PFLU_RS09850	0.61	+0.8
2,168,435	+		PFLU_RS09850	0.61	+1.7
2,168,435	+		PFLU_RS09850	0.61	+1.6
2,168,435	+		PFLU_RS09850	0.61	+0.2
2,168,435	+		PFLU_RS09850	0.61	-0.1
2,168,436	-		PFLU_RS09850	0.61	+2.2
2,168,436	-		PFLU_RS09850	0.61	-1.9
2,168,436	-		PFLU_RS09850	0.61	-1.5
2,168,436	-		PFLU_RS09850	0.61	+1.3
2,168,436	-		PFLU_RS09850	0.61	-1.4
2,168,436	-		PFLU_RS09850	0.61	-1.4
2,168,436	-		PFLU_RS09850	0.61	-2.8
2,168,436	-		PFLU_RS09850	0.61	-0.9
2,168,436	-		PFLU_RS09850	0.61	+1.6
2,168,436	-		PFLU_RS09850	0.61	+1.8
2,168,436	-		PFLU_RS09850	0.61	-1.9
2,168,436	-		PFLU_RS09850	0.61	+0.1
2,168,436	-		PFLU_RS09850	0.61	+0.2
2,168,436	-		PFLU_RS09850	0.61	+0.4
2,168,436	-		PFLU_RS09850	0.61	+1.5
2,168,436	-		PFLU_RS09850	0.61	-0.5
2,168,437	+		PFLU_RS09850	0.61	-1.4
2,168,437	+		PFLU_RS09850	0.61	+1.1
2,168,437	+		PFLU_RS09850	0.61	-0.5
2,168,437	+		PFLU_RS09850	0.61	+0.4
2,168,437	+		PFLU_RS09850	0.61	+0.2
2,168,438	-		PFLU_RS09850	0.61	-1.6
2,168,438	-		PFLU_RS09850	0.61	-1.4
2,168,438	-		PFLU_RS09850	0.61	-2.4
2,168,438	-		PFLU_RS09850	0.61	-2.2
2,168,438	-		PFLU_RS09850	0.61	+0.1
2,168,438	-		PFLU_RS09850	0.61	+1.9
2,168,438	-		PFLU_RS09850	0.61	-2.6
2,168,531	+		PFLU_RS09850	0.68	+2.3
2,168,531	+		PFLU_RS09850	0.68	+1.9
2,168,531	+		PFLU_RS09850	0.68	+1.0
2,168,531	+		PFLU_RS09850	0.68	-1.9
2,168,532	-		PFLU_RS09850	0.68	-0.3
2,168,532	-		PFLU_RS09850	0.68	+2.4
2,168,532	-		PFLU_RS09850	0.68	-1.5
2,168,532	-		PFLU_RS09850	0.68	-1.1
2,168,532	-		PFLU_RS09850	0.68	-2.4
2,168,725	+		PFLU_RS09850	0.82	+2.2
2,168,725	+		PFLU_RS09850	0.82	-0.2
2,168,749	+		PFLU_RS09850	0.84	-1.1
2,168,750	-		PFLU_RS09850	0.84	+0.8
2,168,750	-		PFLU_RS09850	0.84	+1.0
2,168,750	-		PFLU_RS09850	0.84	-1.4
2,168,752	+		PFLU_RS09850	0.84	+0.4
2,168,752	+		PFLU_RS09850	0.84	-1.6
2,168,752	+		PFLU_RS09850	0.84	-0.9
2,168,752	+		PFLU_RS09850	0.84	-1.4
2,168,752	+		PFLU_RS09850	0.84	+1.4
2,168,752	+		PFLU_RS09850	0.84	-0.6
2,168,753	-		PFLU_RS09850	0.84	+3.4
2,168,753	-		PFLU_RS09850	0.84	+0.1
2,168,753	-		PFLU_RS09850	0.84	-1.9
2,168,753	-		PFLU_RS09850	0.84	+2.4
2,168,753	-		PFLU_RS09850	0.84	-0.5
2,168,753	-		PFLU_RS09850	0.84	+1.7
2,168,989	-				+0.9
2,169,261	+		PFLU_RS09855	0.33	+1.4
2,169,262	-		PFLU_RS09855	0.33	+1.8
2,169,262	-		PFLU_RS09855	0.33	-2.3
2,169,262	-		PFLU_RS09855	0.33	-1.6
2,169,262	-		PFLU_RS09855	0.33	-0.3
2,169,262	-		PFLU_RS09855	0.33	-2.7
2,169,262	-		PFLU_RS09855	0.33	-0.4
2,169,262	-		PFLU_RS09855	0.33	+1.8
2,169,263	+		PFLU_RS09855	0.34	-2.0
2,169,340	-		PFLU_RS09855	0.42	-1.8
2,169,354	-		PFLU_RS09855	0.44	+0.1
2,169,354	-		PFLU_RS09855	0.44	-1.3
2,169,416	+		PFLU_RS09855	0.51	-0.8
2,169,417	-		PFLU_RS09855	0.51	-2.2
2,169,417	-		PFLU_RS09855	0.51	-0.9
2,169,417	-		PFLU_RS09855	0.51	-1.4
2,169,417	-		PFLU_RS09855	0.51	+0.3
2,169,478	+		PFLU_RS09855	0.58	+2.9
2,169,478	+		PFLU_RS09855	0.58	-0.3
2,169,479	-		PFLU_RS09855	0.58	-2.5
2,169,479	-		PFLU_RS09855	0.58	-0.5
2,169,479	-		PFLU_RS09855	0.58	-0.3
2,169,479	-		PFLU_RS09855	0.58	+0.8
2,169,479	-		PFLU_RS09855	0.58	-1.3
2,169,493	-		PFLU_RS09855	0.60	-1.1
2,169,493	-		PFLU_RS09855	0.60	+1.3
2,169,558	+		PFLU_RS09855	0.67	+1.9
2,169,558	+		PFLU_RS09855	0.67	+1.7
2,169,558	+		PFLU_RS09855	0.67	-3.0
2,169,558	+		PFLU_RS09855	0.67	+0.5
2,169,615	+		PFLU_RS09855	0.74	+0.6
2,169,615	+		PFLU_RS09855	0.74	-2.1
2,169,616	-		PFLU_RS09855	0.74	+1.6
2,169,616	-		PFLU_RS09855	0.74	-2.3
2,169,639	+		PFLU_RS09855	0.77	+1.2
2,169,639	+		PFLU_RS09855	0.77	-1.4
2,169,640	-		PFLU_RS09855	0.77	+1.0
2,169,711	+		PFLU_RS09855	0.85	+0.3
2,169,711	+		PFLU_RS09855	0.85	-1.8
2,169,711	+		PFLU_RS09855	0.85	+0.2
2,169,711	+		PFLU_RS09855	0.85	-1.9
2,169,711	+		PFLU_RS09855	0.85	-0.3
2,169,712	-		PFLU_RS09855	0.85	+1.1
2,169,712	-		PFLU_RS09855	0.85	-2.3
2,169,712	-		PFLU_RS09855	0.85	+2.3
2,169,712	-		PFLU_RS09855	0.85	+1.1
2,169,712	-		PFLU_RS09855	0.85	-1.0
2,169,712	-		PFLU_RS09855	0.85	+2.2
2,169,712	-		PFLU_RS09855	0.85	+0.2
2,169,712	-		PFLU_RS09855	0.85	-0.3
2,169,712	-		PFLU_RS09855	0.85	+2.5
2,169,712	-		PFLU_RS09855	0.85	-2.6
2,169,769	+				-1.2
2,169,823	+				+0.7
2,169,823	+				+0.1
2,169,823	+				+2.9
2,169,899	+				+0.1
2,169,899	+				-2.1
2,169,899	+				+0.5
2,169,899	+				+0.6
2,169,899	+				-0.7
2,169,900	-				+0.4
2,169,902	+				-1.4
2,169,902	+				-2.6
2,169,902	+				-0.5
2,169,903	-				-1.5
2,169,903	-				-0.2
2,169,903	-				-0.3
2,169,903	-				-1.2
2,169,941	+		PFLU_RS09860	0.10	-1.5
2,169,941	+		PFLU_RS09860	0.10	-1.5