Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09320

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
2,060,925	-				+3.0
2,060,960	+				+0.0
2,060,960	+				+1.4
2,060,960	+				-0.6
2,060,961	-				-1.3
2,060,974	+				-1.2
2,060,975	-				-0.4
2,060,975	-				-1.9
2,061,015	+				-0.8
2,061,019	+				-2.9
2,061,019	+				+2.0
2,061,020	-				+0.1
2,061,020	-				-0.9
2,061,020	-				+0.9
2,061,059	-				+2.1
2,061,059	-				+0.1
2,061,059	-				-1.7
2,061,059	-				-1.0
2,061,059	-				+1.1
2,061,087	+				-0.2
2,061,087	+				+0.8
2,061,088	-				+2.3
2,061,102	+				-2.2
2,061,102	+				-1.0
2,061,102	+				+1.6
2,061,102	+				+0.7
2,061,235	-				-0.6
2,061,268	-				+0.7
2,061,268	-				+1.7
2,061,304	+				-0.1
2,061,339	+				-1.6
2,061,339	+				-1.4
2,061,339	+				+1.5
2,061,340	-				+0.8
2,061,340	-				-2.9
2,061,342	+				+2.8
2,061,342	+				-2.7
2,061,342	+				+1.8
2,061,342	+				-0.5
2,061,343	-				+1.7
2,061,343	-				+1.9
2,061,343	-				-1.2
2,061,343	-				-1.7
2,061,345	+				+3.6
2,061,345	+				+2.2
2,061,345	+				+0.9
2,061,345	+				+0.1
2,061,345	+				-2.3
2,061,346	-				-1.2
2,061,346	-				-1.4
2,061,346	-				-2.5
2,061,346	-				+0.4
2,061,346	-				+1.7
2,061,346	-				-1.3
2,061,370	+				-2.3
2,061,370	+				+1.6
2,061,370	+				+1.4
2,061,370	+				-1.9
2,061,370	+				-1.9
2,061,370	+				+1.2
2,061,370	+				+0.2
2,061,370	+				+0.0
2,061,371	-				-0.7
2,061,371	-				-1.9
2,061,371	-				-0.0
2,061,371	-				-2.0
2,061,371	-				+2.3
2,061,371	-				+1.9
2,061,371	-				-1.4
2,061,371	-				+0.3
2,061,371	-				-1.4
2,061,371	-				+0.1
2,061,371	-				+3.4
2,061,371	-				-0.8
2,061,371	-				-0.0
2,061,371	-				-1.1
2,061,371	-				-2.2
2,061,371	-				-0.2
2,061,371	-				-3.1
2,061,371	-				+1.6
2,061,371	-				-0.6
2,061,371	-				+2.0
2,061,418	+		PFLU_RS09315	0.15	-1.1
2,061,418	+		PFLU_RS09315	0.15	+0.5
2,061,418	+		PFLU_RS09315	0.15	-1.1
2,061,487	-		PFLU_RS09315	0.41	-0.0
2,061,495	+		PFLU_RS09315	0.44	+1.1
2,061,509	+		PFLU_RS09315	0.50	-0.3
2,061,510	-		PFLU_RS09315	0.50	-0.5
2,061,510	-		PFLU_RS09315	0.50	-1.2
2,061,515	+		PFLU_RS09315	0.52	-0.7
2,061,515	+		PFLU_RS09315	0.52	-0.1
2,061,516	-		PFLU_RS09315	0.52	-1.6
2,061,544	+		PFLU_RS09315	0.63	+1.4
2,061,608	+		PFLU_RS09315	0.87	+0.1
2,061,637	+				-2.6
2,061,638	-				-0.2
2,061,644	+				+0.9
2,061,644	+				-0.6
2,061,644	+				-2.6
2,061,644	+				+2.6
2,061,644	+				-1.7
2,061,644	+				-1.2
2,061,644	+				+0.1
2,061,644	+				+1.4
2,061,644	+				+2.4
2,061,644	+				-0.4
2,061,644	+				-2.3
2,061,644	+				+0.4
2,061,644	+				-2.8
2,061,644	+				-1.0
2,061,644	+				+0.6
2,061,644	+				+1.6
2,061,644	+				+0.3
2,061,645	-				-0.9
2,061,645	-				-0.6
2,061,645	-				+1.2
2,061,645	-				-0.5
2,061,645	-				+0.1
2,061,645	-				-0.4
2,061,645	-				-1.9
2,061,645	-				+1.1
2,061,645	-				-1.8
2,061,645	-				+0.6
2,061,645	-				-0.6
2,061,645	-				+0.8
2,061,645	-				-0.7
2,061,645	-				-1.3
2,061,645	-				+0.3
2,061,650	+				-1.3
2,061,650	+				+2.0
2,061,650	+				-0.6
2,061,650	+				-0.7
2,061,650	+				-2.7
2,061,650	+				+0.9
2,061,650	+				+1.5
2,061,650	+				+0.5
2,061,650	+				-0.9
2,061,650	+				-2.2
2,061,650	+				-3.3
2,061,650	+				-1.7
2,061,651	-				+2.9
2,061,651	-				-1.7
2,061,651	-				-0.9
2,061,651	-				+1.4
2,061,651	-				+1.9
2,061,651	-				+1.8
2,061,651	-				-0.2
2,061,651	-				-1.3
2,061,660	-				-0.7
2,061,679	-				+1.5
2,061,679	-				+1.0
2,061,685	+				-0.0
2,061,685	+				-2.9
2,061,686	-				-2.0
2,061,729	+				-0.9
2,061,729	+				-0.9
2,061,730	-				-2.7
2,061,748	+				+1.5
2,061,748	+				-1.2
2,061,748	+				+0.5
2,061,748	+				-0.3
2,061,749	-				-1.3
2,061,762	-				+0.9
2,061,880	+				+0.4
2,061,880	+				-1.0
2,061,880	+				-1.7
2,061,880	+				-2.3
2,061,880	+				+1.6
2,061,880	+				+1.3
2,061,880	+				+2.0
2,061,880	+				+1.3
2,061,880	+				+4.1
2,061,880	+				-1.7
2,061,880	+				-0.5
2,061,880	+				+2.0
2,061,880	+				-2.7
2,061,880	+				-1.9
2,061,880	+				-1.4
2,061,880	+				-0.3
2,061,880	+				-2.0
2,061,880	+				-0.1
2,061,881	-				-1.5
2,061,881	-				+1.4
2,061,881	-				+2.4
2,061,881	-				-0.1
2,061,881	-				-2.2
2,061,881	-				-0.1
2,061,881	-				-0.3
2,061,881	-				-1.4
2,061,881	-				-1.8
2,061,881	-				-0.2
2,061,881	-				+0.8
2,061,881	-				+0.7
2,061,881	-				+1.2
2,061,881	-				+0.7
2,061,881	-				+0.6
2,061,881	-				-0.4
2,061,881	-				-0.8
2,061,881	-				-1.2
2,061,881	-				-1.9
2,061,881	-				-1.7
2,061,881	-				-0.4
2,061,881	-				+0.7
2,061,881	-				+2.2
2,061,881	-				+0.4
2,061,881	-				+0.6
2,061,881	-				-0.4
2,061,894	+				+1.3
2,061,894	+				+0.5
2,061,894	+				-1.7
2,061,894	+				+2.0
2,061,894	+				-1.3
2,061,894	+				+0.8
2,061,894	+				-0.9
2,061,895	-				-1.4
2,061,898	+				-2.0
2,061,898	+				-0.8
2,061,898	+				+1.1
2,061,898	+				+1.3
2,061,898	+				-0.3
2,061,898	+				+0.6
2,061,898	+				+2.4
2,061,898	+				-1.5
2,061,898	+				+0.1
2,061,898	+				+0.5
2,061,899	-				-0.1
2,061,899	-				+2.5
2,061,899	-				-1.8
2,061,899	-				-1.1
2,061,899	-				-2.5
2,061,899	-				-1.5
2,061,899	-				+2.0
2,061,899	-				-0.6
2,061,915	+				+1.7
2,061,915	+				+0.7
2,061,915	+				-2.2
2,061,915	+				+0.1
2,061,915	+				-1.9
2,061,916	-				-1.6
2,061,916	-				-1.5
2,061,922	+				-1.5
2,061,922	+				+0.6
2,061,946	+				-1.6
2,061,947	-				-1.7
2,061,953	-				-2.6
2,061,960	+				+0.8
2,061,960	+				+3.0
2,061,960	+				-0.4
2,061,960	+				+1.8
2,061,961	-				+0.9
2,061,961	-				+0.8
2,061,961	-				+1.0
2,061,961	-				+0.4
2,061,979	+				+1.6
2,061,980	-				-0.7
2,061,980	-				-2.2
2,062,079	-		PFLU_RS09320	0.13	-0.8
2,062,113	-		PFLU_RS09320	0.15	+0.3
2,062,143	+		PFLU_RS09320	0.17	-2.4
2,062,144	-		PFLU_RS09320	0.17	+3.5
2,062,144	-		PFLU_RS09320	0.17	+0.8
2,062,173	+		PFLU_RS09320	0.19	-0.7
2,062,173	+		PFLU_RS09320	0.19	-1.0
2,062,189	+		PFLU_RS09320	0.20	+2.1
2,062,189	+		PFLU_RS09320	0.20	-1.7
2,062,190	-		PFLU_RS09320	0.20	+4.2
2,062,214	+		PFLU_RS09320	0.21	+0.3
2,062,214	+		PFLU_RS09320	0.21	+0.1
2,062,214	+		PFLU_RS09320	0.21	-1.9
2,062,214	+		PFLU_RS09320	0.21	-1.6
2,062,214	+		PFLU_RS09320	0.21	+0.9
2,062,214	+		PFLU_RS09320	0.21	-1.3
2,062,214	+		PFLU_RS09320	0.21	+2.5
2,062,214	+		PFLU_RS09320	0.21	-2.4
2,062,214	+		PFLU_RS09320	0.21	+0.8
2,062,214	+		PFLU_RS09320	0.21	-0.8
2,062,215	-		PFLU_RS09320	0.22	-1.2
2,062,215	-		PFLU_RS09320	0.22	-0.6
2,062,215	-		PFLU_RS09320	0.22	+0.6
2,062,215	-		PFLU_RS09320	0.22	-1.4
2,062,215	-		PFLU_RS09320	0.22	+2.2
2,062,215	-		PFLU_RS09320	0.22	+0.2
2,062,215	-		PFLU_RS09320	0.22	+5.3
2,062,215	-		PFLU_RS09320	0.22	+2.5
2,062,215	-		PFLU_RS09320	0.22	+0.5
2,062,215	-		PFLU_RS09320	0.22	+2.0
2,062,235	+		PFLU_RS09320	0.23	+1.9
2,062,236	-		PFLU_RS09320	0.23	+1.3
2,062,236	-		PFLU_RS09320	0.23	-1.6
2,062,252	+		PFLU_RS09320	0.24	-1.2
2,062,252	+		PFLU_RS09320	0.24	+1.1
2,062,386	+		PFLU_RS09320	0.33	+2.1
2,062,386	+		PFLU_RS09320	0.33	-1.1
2,062,386	+		PFLU_RS09320	0.33	-0.2
2,062,386	+		PFLU_RS09320	0.33	-0.7
2,062,387	-		PFLU_RS09320	0.33	+0.7
2,062,387	-		PFLU_RS09320	0.33	+0.6
2,062,387	-		PFLU_RS09320	0.33	+1.7
2,062,387	-		PFLU_RS09320	0.33	+1.2
2,062,387	-		PFLU_RS09320	0.33	-0.3
2,062,387	-		PFLU_RS09320	0.33	-2.0
2,062,387	-		PFLU_RS09320	0.33	-1.5
2,062,387	-		PFLU_RS09320	0.33	-2.4
2,062,387	-		PFLU_RS09320	0.33	+1.0
2,062,401	-		PFLU_RS09320	0.34	+0.4
2,062,507	+		PFLU_RS09320	0.40	-2.5
2,062,508	-		PFLU_RS09320	0.40	-2.9
2,062,508	-		PFLU_RS09320	0.40	+1.2
2,062,554	+		PFLU_RS09320	0.43	+1.2
2,062,554	+		PFLU_RS09320	0.43	+1.0
2,062,555	-		PFLU_RS09320	0.43	-1.5
2,062,555	-		PFLU_RS09320	0.43	+0.2
2,062,565	+		PFLU_RS09320	0.44	-0.1
2,062,566	-		PFLU_RS09320	0.44	+1.4
2,062,587	-		PFLU_RS09320	0.46	-1.6
2,062,602	-		PFLU_RS09320	0.46	+1.3
2,062,639	-		PFLU_RS09320	0.49	-0.7
2,062,710	+		PFLU_RS09320	0.53	+1.2
2,062,710	+		PFLU_RS09320	0.53	-1.5
2,062,711	-		PFLU_RS09320	0.54	-1.2
2,062,711	-		PFLU_RS09320	0.54	+0.2
2,062,711	-		PFLU_RS09320	0.54	+1.8
2,062,736	+		PFLU_RS09320	0.55	-0.7
2,062,736	+		PFLU_RS09320	0.55	-1.3
2,062,736	+		PFLU_RS09320	0.55	-1.6
2,062,736	+		PFLU_RS09320	0.55	+2.6
2,062,737	-		PFLU_RS09320	0.55	-1.5
2,062,737	-		PFLU_RS09320	0.55	-1.7
2,062,752	+		PFLU_RS09320	0.56	-1.6
2,062,753	-		PFLU_RS09320	0.56	-2.0
2,062,753	-		PFLU_RS09320	0.56	-0.7
2,062,775	+		PFLU_RS09320	0.58	-3.0
2,062,775	+		PFLU_RS09320	0.58	+2.0
2,062,775	+		PFLU_RS09320	0.58	+2.3
2,062,775	+		PFLU_RS09320	0.58	+1.7
2,062,776	-		PFLU_RS09320	0.58	-1.9
2,062,780	+		PFLU_RS09320	0.58	-1.9
2,062,780	+		PFLU_RS09320	0.58	+0.6
2,062,780	+		PFLU_RS09320	0.58	+1.7
2,062,780	+		PFLU_RS09320	0.58	-0.7
2,062,780	+		PFLU_RS09320	0.58	+0.5
2,062,780	+		PFLU_RS09320	0.58	+2.2
2,062,780	+		PFLU_RS09320	0.58	-0.7
2,062,781	-		PFLU_RS09320	0.58	-1.1
2,062,814	+		PFLU_RS09320	0.60	-0.3
2,062,843	+		PFLU_RS09320	0.62	+2.1
2,062,843	+		PFLU_RS09320	0.62	+2.8
2,062,843	+		PFLU_RS09320	0.62	-0.7
2,062,843	+		PFLU_RS09320	0.62	+1.1
2,062,843	+		PFLU_RS09320	0.62	-2.7
2,062,843	+		PFLU_RS09320	0.62	+0.6
2,062,843	+		PFLU_RS09320	0.62	+0.4
2,062,843	+		PFLU_RS09320	0.62	-2.0
2,062,843	+		PFLU_RS09320	0.62	-2.0
2,062,843	+		PFLU_RS09320	0.62	+2.9
2,062,843	+		PFLU_RS09320	0.62	+2.9
2,062,844	-		PFLU_RS09320	0.62	+2.4
2,062,844	-		PFLU_RS09320	0.62	+1.9
2,062,844	-		PFLU_RS09320	0.62	-2.5
2,062,844	-		PFLU_RS09320	0.62	+0.5
2,062,847	+		PFLU_RS09320	0.62	-1.5
2,062,847	+		PFLU_RS09320	0.62	+0.6
2,062,847	+		PFLU_RS09320	0.62	-0.7
2,062,847	+		PFLU_RS09320	0.62	+0.3
2,062,847	+		PFLU_RS09320	0.62	-0.4
2,062,847	+		PFLU_RS09320	0.62	-3.0
2,062,847	+		PFLU_RS09320	0.62	-1.1
2,062,847	+		PFLU_RS09320	0.62	+0.7
2,062,847	+		PFLU_RS09320	0.62	+2.7
2,062,847	+		PFLU_RS09320	0.62	+1.9
2,062,847	+		PFLU_RS09320	0.62	-2.2
2,062,847	+		PFLU_RS09320	0.62	+1.9
2,062,847	+		PFLU_RS09320	0.62	-2.0
2,062,847	+		PFLU_RS09320	0.62	-1.8
2,062,847	+		PFLU_RS09320	0.62	+1.2
2,062,847	+		PFLU_RS09320	0.62	+1.2
2,062,847	+		PFLU_RS09320	0.62	+0.4
2,062,847	+		PFLU_RS09320	0.62	-0.0
2,062,847	+		PFLU_RS09320	0.62	-0.8
2,062,847	+		PFLU_RS09320	0.62	-1.1
2,062,847	+		PFLU_RS09320	0.62	-0.7
2,062,847	+		PFLU_RS09320	0.62	-0.4
2,062,847	+		PFLU_RS09320	0.62	+1.5
2,062,847	+		PFLU_RS09320	0.62	-0.7
2,062,848	-		PFLU_RS09320	0.62	-2.4
2,062,848	-		PFLU_RS09320	0.62	-1.0
2,062,848	-		PFLU_RS09320	0.62	+1.1
2,062,848	-		PFLU_RS09320	0.62	-1.2
2,062,848	-		PFLU_RS09320	0.62	+3.1
2,062,848	-		PFLU_RS09320	0.62	-0.6
2,062,848	-		PFLU_RS09320	0.62	+1.7
2,062,848	-		PFLU_RS09320	0.62	+1.0
2,062,848	-		PFLU_RS09320	0.62	+0.3
2,062,848	-		PFLU_RS09320	0.62	-1.8
2,062,848	-		PFLU_RS09320	0.62	+0.4
2,062,848	-		PFLU_RS09320	0.62	+0.6
2,062,848	-		PFLU_RS09320	0.62	-1.7
2,062,848	-		PFLU_RS09320	0.62	+1.1
2,062,848	-		PFLU_RS09320	0.62	-1.0
2,062,848	-		PFLU_RS09320	0.62	+1.9
2,062,848	-		PFLU_RS09320	0.62	-0.9
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