Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06810

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
1,524,838	+		PFLU_RS06805	0.69	-1.7
1,524,838	+		PFLU_RS06805	0.69	-1.4
1,524,839	-		PFLU_RS06805	0.69	-0.2
1,524,839	-		PFLU_RS06805	0.69	-1.6
1,524,839	-		PFLU_RS06805	0.69	-2.5
1,524,839	-		PFLU_RS06805	0.69	-2.6
1,524,994	+		PFLU_RS06805	0.74	-0.3
1,524,994	+		PFLU_RS06805	0.74	-2.9
1,524,994	+		PFLU_RS06805	0.74	-1.9
1,524,994	+		PFLU_RS06805	0.74	-1.7
1,524,994	+		PFLU_RS06805	0.74	-1.3
1,524,994	+		PFLU_RS06805	0.74	-2.3
1,524,994	+		PFLU_RS06805	0.74	-0.7
1,524,994	+		PFLU_RS06805	0.74	-0.8
1,524,995	-		PFLU_RS06805	0.74	-1.1
1,524,995	-		PFLU_RS06805	0.74	+0.2
1,524,995	-		PFLU_RS06805	0.74	-3.3
1,524,995	-		PFLU_RS06805	0.74	-2.0
1,524,995	-		PFLU_RS06805	0.74	-1.1
1,524,995	-		PFLU_RS06805	0.74	-2.3
1,524,995	-		PFLU_RS06805	0.74	+0.3
1,524,995	-		PFLU_RS06805	0.74	-1.5
1,525,262	+		PFLU_RS06805	0.82	-1.0
1,525,262	+		PFLU_RS06805	0.82	-2.4
1,525,262	+		PFLU_RS06805	0.82	-1.0
1,525,262	+		PFLU_RS06805	0.82	-1.8
1,525,262	+		PFLU_RS06805	0.82	-1.7
1,525,262	+		PFLU_RS06805	0.82	-0.0
1,525,262	+		PFLU_RS06805	0.82	+3.2
1,525,262	+		PFLU_RS06805	0.82	-2.3
1,525,263	-		PFLU_RS06805	0.82	-0.0
1,525,263	-		PFLU_RS06805	0.82	-2.3
1,525,263	-		PFLU_RS06805	0.82	-1.1
1,525,263	-		PFLU_RS06805	0.82	-2.6
1,525,263	-		PFLU_RS06805	0.82	-2.6
1,525,263	-		PFLU_RS06805	0.82	-0.5
1,525,263	-		PFLU_RS06805	0.82	-1.0
1,525,263	-		PFLU_RS06805	0.82	-0.8
1,525,263	-		PFLU_RS06805	0.82	-1.7
1,525,263	-		PFLU_RS06805	0.82	-1.6
1,525,263	-		PFLU_RS06805	0.82	-3.5
1,525,273	+		PFLU_RS06805	0.83	-3.1
1,525,273	+		PFLU_RS06805	0.83	-1.3
1,525,274	-		PFLU_RS06805	0.83	-2.3
1,525,274	-		PFLU_RS06805	0.83	-1.4
1,525,348	+		PFLU_RS06805	0.85	-1.2
1,525,348	+		PFLU_RS06805	0.85	-2.0
1,525,348	+		PFLU_RS06805	0.85	-1.6
1,525,348	+		PFLU_RS06805	0.85	-0.5
1,525,348	+		PFLU_RS06805	0.85	-1.7
1,525,348	+		PFLU_RS06805	0.85	-1.0
1,525,348	+		PFLU_RS06805	0.85	-2.7
1,525,348	+		PFLU_RS06805	0.85	-1.9
1,525,348	+		PFLU_RS06805	0.85	-0.6
1,525,348	+		PFLU_RS06805	0.85	-1.7
1,525,348	+		PFLU_RS06805	0.85	-2.2
1,525,348	+		PFLU_RS06805	0.85	-0.1
1,525,348	+		PFLU_RS06805	0.85	-2.9
1,525,349	-		PFLU_RS06805	0.85	-0.9
1,525,349	-		PFLU_RS06805	0.85	+0.3
1,525,349	-		PFLU_RS06805	0.85	-2.2
1,525,349	-		PFLU_RS06805	0.85	-1.9
1,525,349	-		PFLU_RS06805	0.85	-1.8
1,525,349	-		PFLU_RS06805	0.85	-1.1
1,525,349	-		PFLU_RS06805	0.85	-2.2
1,525,349	-		PFLU_RS06805	0.85	-1.7
1,525,349	-		PFLU_RS06805	0.85	-2.9
1,525,349	-		PFLU_RS06805	0.85	-0.1
1,525,349	-		PFLU_RS06805	0.85	-3.0
1,525,349	-		PFLU_RS06805	0.85	-0.9
1,525,349	-		PFLU_RS06805	0.85	+1.6
1,525,349	-		PFLU_RS06805	0.85	-1.9
1,525,349	-		PFLU_RS06805	0.85	+0.1
1,525,349	-		PFLU_RS06805	0.85	-0.4
1,525,571	+				-1.7
1,525,571	+				-1.5
1,525,571	+				-2.7
1,525,571	+				-1.5
1,525,571	+				-1.6
1,525,571	+				-3.0
1,525,571	+				-1.8
1,525,572	-				-2.0
1,525,572	-				-1.5
1,525,572	-				-1.6
1,525,572	-				-2.4
1,525,572	-				-1.9
1,525,572	-				-1.9
1,525,588	+				-2.3
1,525,588	+				-0.4
1,525,588	+				-0.4
1,525,588	+				-1.1
1,525,588	+				-3.2
1,525,588	+				-2.1
1,525,588	+				-2.0
1,525,588	+				-1.5
1,525,588	+				-1.9
1,525,589	-				-1.8
1,525,589	-				-1.3
1,525,589	-				-1.4
1,525,589	-				-1.1
1,525,589	-				-1.1
1,525,589	-				-1.3
1,525,589	-				-2.3
1,525,589	-				-0.9
1,525,589	-				-2.5
1,525,589	-				-2.7
1,525,589	-				-2.8
1,525,673	-				-0.9
1,525,673	-				-1.3
1,525,776	+				-0.8
1,525,776	+				-2.0
1,525,777	-				+0.4
1,525,777	-				-0.5
1,525,822	+				-1.1
1,525,822	+				-1.7
1,525,822	+				-0.9
1,525,918	+				-0.7
1,525,918	+				-1.8
1,525,919	-				-1.3
1,525,919	-				-2.0
1,525,919	-				-1.7
1,525,919	-				-0.5
1,526,380	+		PFLU_RS06810	0.49	-1.3
1,526,380	+		PFLU_RS06810	0.49	-1.9
1,526,380	+		PFLU_RS06810	0.49	-2.1
1,526,380	+		PFLU_RS06810	0.49	-2.2
1,526,381	-		PFLU_RS06810	0.49	-1.4
1,526,381	-		PFLU_RS06810	0.49	-2.0
1,526,381	-		PFLU_RS06810	0.49	-1.7
1,526,381	-		PFLU_RS06810	0.49	-1.3
1,526,381	-		PFLU_RS06810	0.49	-1.6
1,526,381	-		PFLU_RS06810	0.49	-0.2
1,526,501	-		PFLU_RS06810	0.59	-1.7
1,526,501	-		PFLU_RS06810	0.59	-0.5
1,526,569	+		PFLU_RS06810	0.65	-1.3
1,526,569	+		PFLU_RS06810	0.65	-1.6
1,526,569	+		PFLU_RS06810	0.65	+0.8
1,526,570	-		PFLU_RS06810	0.65	-2.9
1,526,570	-		PFLU_RS06810	0.65	-0.6
1,526,570	-		PFLU_RS06810	0.65	-2.2
1,526,570	-		PFLU_RS06810	0.65	-1.3
1,526,570	-		PFLU_RS06810	0.65	-0.2
1,526,570	-		PFLU_RS06810	0.65	-1.4
1,526,611	+		PFLU_RS06810	0.69	-1.2
1,526,611	+		PFLU_RS06810	0.69	-1.7
1,526,611	+		PFLU_RS06810	0.69	-2.7
1,526,612	-		PFLU_RS06810	0.69	-1.2
1,526,674	+		PFLU_RS06810	0.74	+0.1
1,526,674	+		PFLU_RS06810	0.74	-1.5
1,526,675	-		PFLU_RS06810	0.75	-1.5
1,526,675	-		PFLU_RS06810	0.75	-2.5
1,526,675	-		PFLU_RS06810	0.75	-2.2
1,526,675	-		PFLU_RS06810	0.75	-0.4
1,526,675	-		PFLU_RS06810	0.75	-1.5
1,526,696	-		PFLU_RS06810	0.76	-1.6
1,526,788	+		PFLU_RS06810	0.84	-2.1
1,526,788	+		PFLU_RS06810	0.84	-2.1
1,526,825	+		PFLU_RS06810	0.88	-1.4
1,526,843	+		PFLU_RS06810	0.89	-0.5
1,526,843	+		PFLU_RS06810	0.89	-2.1
1,526,843	+		PFLU_RS06810	0.89	-2.3
1,526,897	+				-0.5
1,526,898	-				-2.4
1,526,898	-				-1.1
1,526,957	+				-0.9
1,526,957	+				-2.5
1,526,957	+				-2.1
1,526,957	+				-0.7
1,526,957	+				-2.1
1,526,957	+				+0.8
1,526,957	+				-0.9
1,526,957	+				-0.9
1,526,958	-				-1.3
1,526,958	-				-0.9
1,526,958	-				-0.0
1,526,958	-				-0.2
1,526,958	-				+0.8
1,526,958	-				-0.1
1,527,039	+				+1.0
1,527,040	-				-1.4
1,527,040	-				+1.1
1,527,043	+				-1.6
1,527,043	+				-1.4
1,527,043	+				-0.9
1,527,043	+				-0.9
1,527,044	-				+2.5
1,527,044	-				+2.4
1,527,044	-				+0.7
1,527,044	-				-2.4
1,527,044	-				+2.2
1,527,044	-				+2.6
1,527,044	-				-1.6
1,527,044	-				+0.7
1,527,044	-				+0.5
1,527,044	-				-2.5
1,527,052	-				+3.2
1,527,059	-				+3.0
1,527,060	+				+0.3
1,527,060	+				-2.8
1,527,061	-				+0.6
1,527,061	-				+2.3
1,527,064	+				-1.7
1,527,064	+				+0.8
1,527,065	-				-0.1
1,527,065	-				+1.9
1,527,065	-				+3.3
1,527,065	-				+1.2
1,527,142	+				-0.5
1,527,143	-				+0.1
1,527,177	+				+1.0
1,527,178	-				+1.5
1,527,178	-				-0.4
1,527,178	-				-1.2
1,527,193	+				-2.9
1,527,193	+				+0.5
1,527,194	-				-1.7
1,527,199	+				-0.8
1,527,199	+				+1.8
1,527,199	+				-0.3
1,527,199	+				-1.0
1,527,200	-				+1.6
1,527,202	+				-0.8
1,527,202	+				-1.5
1,527,202	+				+0.8
1,527,203	-				+0.2
1,527,203	-				-0.9
1,527,203	-				+0.4
1,527,246	+				-0.0
1,527,246	+				+0.2
1,527,246	+				-0.6
1,527,247	-				-0.1
1,527,247	-				-2.4
1,527,247	-				+1.1
1,527,247	-				-0.1
1,527,247	-				-1.7
1,527,247	-				+2.3
1,527,247	-				-2.1
1,527,325	+		PFLU_RS06815	0.11	+1.3
1,527,325	+		PFLU_RS06815	0.11	+1.7
1,527,325	+		PFLU_RS06815	0.11	+0.6
1,527,325	+		PFLU_RS06815	0.11	+1.8
1,527,325	+		PFLU_RS06815	0.11	+2.7
1,527,325	+		PFLU_RS06815	0.11	+3.0
1,527,325	+		PFLU_RS06815	0.11	+1.1
1,527,325	+		PFLU_RS06815	0.11	-1.5
1,527,325	+		PFLU_RS06815	0.11	+1.6
1,527,326	-		PFLU_RS06815	0.12	-2.6
1,527,326	-		PFLU_RS06815	0.12	-0.8
1,527,326	-		PFLU_RS06815	0.12	-2.4
1,527,326	-		PFLU_RS06815	0.12	+1.1
1,527,326	-		PFLU_RS06815	0.12	+0.1
1,527,326	-		PFLU_RS06815	0.12	+1.5
1,527,326	-		PFLU_RS06815	0.12	+0.5
1,527,326	-		PFLU_RS06815	0.12	+0.1
1,527,326	-		PFLU_RS06815	0.12	+1.5
1,527,326	-		PFLU_RS06815	0.12	-1.2
1,527,326	-		PFLU_RS06815	0.12	-1.2
1,527,397	+		PFLU_RS06815	0.23	-2.2
1,527,397	+		PFLU_RS06815	0.23	-1.2
1,527,397	+		PFLU_RS06815	0.23	+0.3
1,527,397	+		PFLU_RS06815	0.23	+0.3
1,527,397	+		PFLU_RS06815	0.23	+1.5
1,527,397	+		PFLU_RS06815	0.23	+0.2
1,527,397	+		PFLU_RS06815	0.23	-0.3
1,527,397	+		PFLU_RS06815	0.23	+0.2
1,527,397	+		PFLU_RS06815	0.23	+2.0
1,527,397	+		PFLU_RS06815	0.23	-1.7
1,527,397	+		PFLU_RS06815	0.23	-2.8
1,527,398	-		PFLU_RS06815	0.23	-1.9
1,527,398	-		PFLU_RS06815	0.23	-0.3
1,527,398	-		PFLU_RS06815	0.23	-0.7
1,527,414	+		PFLU_RS06815	0.25	-0.3
1,527,414	+		PFLU_RS06815	0.25	+0.9
1,527,445	-		PFLU_RS06815	0.30	+0.4
1,527,597	+		PFLU_RS06815	0.54	-0.9
1,527,597	+		PFLU_RS06815	0.54	-0.1
1,527,597	+		PFLU_RS06815	0.54	+2.0
1,527,597	+		PFLU_RS06815	0.54	+0.1
1,527,597	+		PFLU_RS06815	0.54	+1.6
1,527,597	+		PFLU_RS06815	0.54	-0.3
1,527,597	+		PFLU_RS06815	0.54	-0.9
1,527,597	+		PFLU_RS06815	0.54	-0.7
1,527,597	+		PFLU_RS06815	0.54	-0.9
1,527,597	+		PFLU_RS06815	0.54	-2.3
1,527,598	-		PFLU_RS06815	0.55	+0.6
1,527,598	-		PFLU_RS06815	0.55	-2.9
1,527,598	-		PFLU_RS06815	0.55	-0.6
1,527,598	-		PFLU_RS06815	0.55	-1.8
1,527,598	-		PFLU_RS06815	0.55	-0.8
1,527,598	-		PFLU_RS06815	0.55	+1.8
1,527,598	-		PFLU_RS06815	0.55	-0.5
1,527,598	-		PFLU_RS06815	0.55	-1.4
1,527,598	-		PFLU_RS06815	0.55	+1.7
1,527,760	+		PFLU_RS06815	0.80	-0.6
1,527,760	+		PFLU_RS06815	0.80	-0.3
1,527,760	+		PFLU_RS06815	0.80	-0.2
1,527,760	+		PFLU_RS06815	0.80	+2.4
1,527,760	+		PFLU_RS06815	0.80	-1.8
1,527,761	-		PFLU_RS06815	0.80	+1.1
1,527,761	-		PFLU_RS06815	0.80	-0.3
1,527,761	-		PFLU_RS06815	0.80	-0.7
1,527,761	-		PFLU_RS06815	0.80	-1.5
1,527,812	+		PFLU_RS06815	0.88	+1.3
1,527,813	-		PFLU_RS06815	0.88	-0.4
1,527,813	-		PFLU_RS06815	0.88	-0.5
1,527,813	-		PFLU_RS06815	0.88	-1.3
1,527,813	-		PFLU_RS06815	0.88	+1.1
1,527,898	-				-0.1
1,527,922	+				+2.9
1,527,922	+				-2.3
1,527,923	-				-0.7