Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS00290

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
58,417	-		PFLU_RS00285	0.37	-1.2
58,452	+		PFLU_RS00285	0.42	-0.2
58,452	+		PFLU_RS00285	0.42	+2.9
58,453	-		PFLU_RS00285	0.42	-0.3
58,453	-		PFLU_RS00285	0.42	-0.9
58,453	-		PFLU_RS00285	0.42	-1.4
58,453	-		PFLU_RS00285	0.42	+1.2
58,453	-		PFLU_RS00285	0.42	+3.2
58,453	-		PFLU_RS00285	0.42	+3.4
58,453	-		PFLU_RS00285	0.42	-1.1
58,453	-		PFLU_RS00285	0.42	-0.1
58,454	+		PFLU_RS00285	0.42	-0.8
58,454	+		PFLU_RS00285	0.42	+2.5
58,454	+		PFLU_RS00285	0.42	+1.8
58,454	+		PFLU_RS00285	0.42	+0.3
58,454	+		PFLU_RS00285	0.42	+2.5
58,454	+		PFLU_RS00285	0.42	+2.9
58,454	+		PFLU_RS00285	0.42	+2.8
58,454	+		PFLU_RS00285	0.42	+0.4
58,454	+		PFLU_RS00285	0.42	-1.1
58,454	+		PFLU_RS00285	0.42	-0.5
58,454	+		PFLU_RS00285	0.42	+1.4
58,454	+		PFLU_RS00285	0.42	+2.0
58,454	+		PFLU_RS00285	0.42	+0.4
58,454	+		PFLU_RS00285	0.42	+0.9
58,454	+		PFLU_RS00285	0.42	-1.5
58,454	+		PFLU_RS00285	0.42	+1.8
58,454	+		PFLU_RS00285	0.42	-0.2
58,454	+		PFLU_RS00285	0.42	+1.5
58,455	-		PFLU_RS00285	0.42	-2.4
58,455	-		PFLU_RS00285	0.42	+3.0
58,455	-		PFLU_RS00285	0.42	+0.3
58,455	-		PFLU_RS00285	0.42	+2.2
58,455	-		PFLU_RS00285	0.42	-1.0
58,455	-		PFLU_RS00285	0.42	+2.3
58,455	-		PFLU_RS00285	0.42	-0.6
58,455	-		PFLU_RS00285	0.42	-0.0
58,455	-		PFLU_RS00285	0.42	+1.0
58,455	-		PFLU_RS00285	0.42	-0.5
58,455	-		PFLU_RS00285	0.42	+1.2
58,455	-		PFLU_RS00285	0.42	-1.5
58,455	-		PFLU_RS00285	0.42	+3.6
58,455	-		PFLU_RS00285	0.42	+3.9
58,455	-		PFLU_RS00285	0.42	-0.9
58,465	+		PFLU_RS00285	0.44	-0.1
58,465	+		PFLU_RS00285	0.44	+0.5
58,465	+		PFLU_RS00285	0.44	+1.7
58,466	-		PFLU_RS00285	0.44	+1.4
58,466	-		PFLU_RS00285	0.44	+4.6
58,466	-		PFLU_RS00285	0.44	+2.0
58,493	+		PFLU_RS00285	0.48	-1.4
58,493	+		PFLU_RS00285	0.48	-0.1
58,493	+		PFLU_RS00285	0.48	+1.4
58,493	+		PFLU_RS00285	0.48	+1.4
58,493	+		PFLU_RS00285	0.48	-0.5
58,493	+		PFLU_RS00285	0.48	+1.4
58,493	+		PFLU_RS00285	0.48	+1.0
58,494	-		PFLU_RS00285	0.48	-0.4
58,494	-		PFLU_RS00285	0.48	+1.8
58,494	-		PFLU_RS00285	0.48	-1.5
58,494	-		PFLU_RS00285	0.48	+1.6
58,661	+		PFLU_RS00285	0.74	-1.3
58,661	+		PFLU_RS00285	0.74	+0.1
58,661	+		PFLU_RS00285	0.74	-1.4
58,662	-		PFLU_RS00285	0.74	+1.3
58,662	-		PFLU_RS00285	0.74	+3.5
58,662	-		PFLU_RS00285	0.74	+2.5
58,662	-		PFLU_RS00285	0.74	+0.2
58,662	-		PFLU_RS00285	0.74	+1.5
58,662	-		PFLU_RS00285	0.74	-1.1
58,662	-		PFLU_RS00285	0.74	+0.2
58,851	-				+0.6
58,851	-				+1.7
58,851	-				-0.9
58,851	-				+0.6
58,851	-				-1.1
58,856	+				-0.7
58,857	-				-0.1
58,857	-				-1.5
58,867	+				+0.2
58,868	-				+0.6
58,872	+				+1.1
58,872	+				+2.4
58,872	+				+3.1
58,872	+				+1.4
58,872	+				+1.4
58,872	+				+0.4
58,872	+				+2.8
58,872	+				+0.8
58,872	+				+0.8
58,872	+				-0.6
58,873	-				-0.4
58,873	-				-1.9
58,873	-				+0.4
58,873	-				+0.2
58,873	-				+1.2
58,873	-				-1.3
58,873	-				+4.8
58,873	-				+0.1
58,873	-				-0.5
58,873	-				+1.5
58,873	-				-1.7
58,873	-				+3.2
58,881	+				+1.6
58,881	+				-0.2
58,881	+				-0.3
58,881	+				+1.8
58,882	-				+0.5
58,882	-				-0.4
58,884	-				-2.3
58,884	-				-1.7
58,909	+				+2.3
58,913	+				+1.6
58,914	-				-1.6
58,914	-				-0.9
58,937	+				-0.9
58,937	+				-0.8
58,937	+				+0.8
58,938	-				-2.2
58,939	+				+1.1
58,939	+				-1.1
58,940	-				-1.9
58,940	-				-0.6
58,940	-				-0.8
58,940	-				-3.3
58,952	+				+1.6
58,952	+				-1.9
58,952	+				-1.1
58,953	-				-1.3
58,953	-				+1.1
58,953	-				-1.4
58,957	-				-1.6
58,982	-				+2.1
58,982	-				-0.6
59,018	+				+0.4
59,018	+				+2.2
59,018	+				-1.5
59,018	+				-1.1
59,024	+				-2.4
59,025	-				-0.4
59,052	+				-0.3
59,052	+				-1.1
59,052	+				-0.6
59,052	+				-2.0
59,052	+				-1.1
59,052	+				+2.2
59,052	+				+0.8
59,052	+				-1.9
59,053	-				-0.6
59,053	-				-0.7
59,053	-				+1.9
59,053	-				-0.8
59,053	-				+2.2
59,053	-				+0.1
59,053	-				+0.7
59,053	-				+0.9
59,054	+				-1.1
59,055	-				-2.0
59,055	-				+1.1
59,066	+				-1.5
59,074	+				+2.8
59,074	+				+2.0
59,074	+				+2.3
59,075	-				-0.4
59,096	+				-0.8
59,096	+				-1.2
59,096	+				+3.0
59,096	+				-0.4
59,096	+				-1.9
59,096	+				+0.5
59,097	-				-1.9
59,097	-				-0.4
59,097	-				+1.6
59,097	-				-0.1
59,097	-				-0.4
59,120	+				+1.3
59,120	+				-1.9
59,120	+				-0.8
59,120	+				+1.4
59,120	+				-2.1
59,120	+				-0.2
59,120	+				-0.4
59,120	+				+1.4
59,120	+				-0.0
59,120	+				-1.8
59,120	+				-2.5
59,120	+				+0.7
59,121	-				+0.8
59,121	-				-0.8
59,121	-				-1.5
59,121	-				-1.5
59,121	-				+1.4
59,121	-				+1.9
59,121	-				-2.5
59,121	-				+0.6
59,121	-				+0.4
59,121	-				-1.3
59,121	-				+0.7
59,121	-				-0.6
59,121	-				+1.6
59,121	-				-1.1
59,121	-				+1.8
59,127	+				-1.8
59,127	+				-0.9
59,127	+				-1.9
59,128	-				+2.4
59,128	-				-0.9
59,128	-				-1.1
59,128	-				+0.8
59,128	-				-1.0
59,158	+				-0.1
59,181	+				-0.4
59,277	-				-1.1
59,277	-				+1.9
59,277	-				-2.2
59,525	+		PFLU_RS00290	0.29	+1.4
59,525	+		PFLU_RS00290	0.29	-1.6
59,525	+		PFLU_RS00290	0.29	-0.5
59,525	+		PFLU_RS00290	0.29	-1.5
59,526	-		PFLU_RS00290	0.29	-1.9
59,526	-		PFLU_RS00290	0.29	-0.1
59,526	-		PFLU_RS00290	0.29	+2.4
59,526	-		PFLU_RS00290	0.29	-1.2
59,526	-		PFLU_RS00290	0.29	-1.3
59,526	-		PFLU_RS00290	0.29	+0.3
59,526	-		PFLU_RS00290	0.29	-2.0
59,526	-		PFLU_RS00290	0.29	+1.6
59,529	+		PFLU_RS00290	0.30	+0.3
59,529	+		PFLU_RS00290	0.30	-0.6
59,529	+		PFLU_RS00290	0.30	+0.9
59,529	+		PFLU_RS00290	0.30	+1.5
59,530	-		PFLU_RS00290	0.30	+0.9
59,530	-		PFLU_RS00290	0.30	-0.9
59,530	-		PFLU_RS00290	0.30	-2.1
59,530	-		PFLU_RS00290	0.30	-0.6
59,530	-		PFLU_RS00290	0.30	+1.8
59,530	-		PFLU_RS00290	0.30	-2.8
59,530	-		PFLU_RS00290	0.30	-1.2
59,530	-		PFLU_RS00290	0.30	+1.9
59,530	-		PFLU_RS00290	0.30	+0.1
59,530	-		PFLU_RS00290	0.30	-0.7
59,530	-		PFLU_RS00290	0.30	+0.5
59,530	-		PFLU_RS00290	0.30	+1.1
59,589	+		PFLU_RS00290	0.35	+1.4
59,589	+		PFLU_RS00290	0.35	+0.5
59,589	+		PFLU_RS00290	0.35	-2.0
59,589	+		PFLU_RS00290	0.35	-1.3
59,589	+		PFLU_RS00290	0.35	-2.5
59,589	+		PFLU_RS00290	0.35	-0.1
59,589	+		PFLU_RS00290	0.35	-0.7
59,589	+		PFLU_RS00290	0.35	-0.2
59,590	-		PFLU_RS00290	0.35	+1.2
59,590	-		PFLU_RS00290	0.35	-0.6
59,590	-		PFLU_RS00290	0.35	-1.6
59,590	-		PFLU_RS00290	0.35	-1.2
59,595	+		PFLU_RS00290	0.35	-0.6
59,595	+		PFLU_RS00290	0.35	+1.8
59,595	+		PFLU_RS00290	0.35	-1.6
59,595	+		PFLU_RS00290	0.35	-2.8
59,595	+		PFLU_RS00290	0.35	+0.8
59,596	-		PFLU_RS00290	0.35	-0.8
59,596	-		PFLU_RS00290	0.35	+1.7
59,596	-		PFLU_RS00290	0.35	+1.9
59,596	-		PFLU_RS00290	0.35	+2.8
59,596	-		PFLU_RS00290	0.35	-0.3
59,596	-		PFLU_RS00290	0.35	-1.1
59,679	+		PFLU_RS00290	0.43	-1.1
59,679	+		PFLU_RS00290	0.43	-1.5
59,679	+		PFLU_RS00290	0.43	+2.4
59,679	+		PFLU_RS00290	0.43	-0.7
59,679	+		PFLU_RS00290	0.43	-1.8
59,680	-		PFLU_RS00290	0.43	-1.8
59,680	-		PFLU_RS00290	0.43	-0.6
59,680	-		PFLU_RS00290	0.43	+0.4
59,680	-		PFLU_RS00290	0.43	+0.4
59,680	-		PFLU_RS00290	0.43	+2.0
59,680	-		PFLU_RS00290	0.43	+1.8
59,680	-		PFLU_RS00290	0.43	+3.2
59,680	-		PFLU_RS00290	0.43	+1.8
59,853	+		PFLU_RS00290	0.58	-1.1
59,853	+		PFLU_RS00290	0.58	-1.4
59,853	+		PFLU_RS00290	0.58	-0.9
59,854	-		PFLU_RS00290	0.58	+2.1
59,854	-		PFLU_RS00290	0.58	-1.4
59,854	-		PFLU_RS00290	0.58	+1.4
59,854	-		PFLU_RS00290	0.58	-1.7
59,854	-		PFLU_RS00290	0.58	-0.6
59,854	-		PFLU_RS00290	0.58	-2.0
59,854	-		PFLU_RS00290	0.58	+0.6
59,854	-		PFLU_RS00290	0.58	-0.1
59,934	+		PFLU_RS00290	0.65	-0.7
59,993	+		PFLU_RS00290	0.71	+2.1
59,994	-		PFLU_RS00290	0.71	+0.6
60,039	+		PFLU_RS00290	0.75	+0.3
60,039	+		PFLU_RS00290	0.75	-0.5
60,039	+		PFLU_RS00290	0.75	+1.0
60,040	-		PFLU_RS00290	0.75	+2.2
60,040	-		PFLU_RS00290	0.75	-2.5
60,040	-		PFLU_RS00290	0.75	-0.7
60,040	-		PFLU_RS00290	0.75	+2.5
60,160	-		PFLU_RS00290	0.85	-1.4
60,229	+				-1.3
60,230	-				-1.6
60,237	+				+0.5
60,237	+				+1.1
60,237	+				+1.5
60,237	+				-0.8
60,238	-				-1.1
60,238	-				-0.4
60,285	-				+2.2
60,326	+				+1.7
60,326	+				+1.9
60,326	+				+0.6
60,327	-				+2.8
60,327	-				+0.3
60,327	-				-1.7
60,327	-				+0.3
60,341	-				+1.8
60,490	+				-2.1
60,490	+				-0.8
60,490	+				+0.8
60,490	+				-1.4
60,490	+				+1.9
60,490	+				+1.3
60,490	+				-0.8
60,490	+				-1.8
60,490	+				-0.4
60,491	-				+1.9
60,491	-				+2.6
60,491	-				+1.0
60,491	-				+1.8
60,491	-				-2.8
60,491	-				+0.3
60,491	-				-1.5
60,491	-				+2.0
60,821	-		PFLU_RS00295	0.28	-0.8
60,821	-		PFLU_RS00295	0.28	-2.7
60,821	-		PFLU_RS00295	0.28	-1.9
60,837	+		PFLU_RS00295	0.29	+0.9
60,837	+		PFLU_RS00295	0.29	-1.2
60,837	+		PFLU_RS00295	0.29	-1.7
60,838	-		PFLU_RS00295	0.29	-0.9
60,838	-		PFLU_RS00295	0.29	-0.2
60,838	-		PFLU_RS00295	0.29	+1.8
60,838	-		PFLU_RS00295	0.29	+0.7
60,838	-		PFLU_RS00295	0.29	+2.1
60,841	+		PFLU_RS00295	0.29	-2.1
60,841	+		PFLU_RS00295	0.29	-1.9
60,841	+		PFLU_RS00295	0.29	+0.5
60,841	+		PFLU_RS00295	0.29	-1.4
60,842	-		PFLU_RS00295	0.29	+2.8
60,842	-		PFLU_RS00295	0.29	-1.8
60,842	-		PFLU_RS00295	0.29	-2.8
60,842	-		PFLU_RS00295	0.29	-1.7
60,842	-		PFLU_RS00295	0.29	+0.1
60,842	-		PFLU_RS00295	0.29	-1.4
61,159	+		PFLU_RS00295	0.49	+0.8
61,159	+		PFLU_RS00295	0.49	-0.8
61,159	+		PFLU_RS00295	0.49	-2.0
61,159	+		PFLU_RS00295	0.49	+2.5
61,159	+		PFLU_RS00295	0.49	+2.7
61,159	+		PFLU_RS00295	0.49	+1.1
61,159	+		PFLU_RS00295	0.49	+3.8
61,159	+		PFLU_RS00295	0.49	+0.4
61,159	+		PFLU_RS00295	0.49	+1.4
61,159	+		PFLU_RS00295	0.49	-2.2
61,159	+		PFLU_RS00295	0.49	+0.7
61,159	+		PFLU_RS00295	0.49	+0.1
61,159	+		PFLU_RS00295	0.49	+2.1
61,159	+		PFLU_RS00295	0.49	-0.3
61,159	+		PFLU_RS00295	0.49	+0.3
61,159	+		PFLU_RS00295	0.49	+1.4
61,159	+		PFLU_RS00295	0.49	-2.2
61,159	+		PFLU_RS00295	0.49	+0.3
61,159	+		PFLU_RS00295	0.49	-0.0
61,159	+		PFLU_RS00295	0.49	+1.5
61,160	-		PFLU_RS00295	0.49	+1.7
61,160	-		PFLU_RS00295	0.49	-2.0
61,160	-		PFLU_RS00295	0.49	+0.6
61,160	-		PFLU_RS00295	0.49	+1.4
61,160	-		PFLU_RS00295	0.49	+2.2
61,160	-		PFLU_RS00295	0.49	+1.2
61,160	-		PFLU_RS00295	0.49	+0.2
61,160	-		PFLU_RS00295	0.49	+2.4
61,160	-		PFLU_RS00295	0.49	+0.2
61,160	-		PFLU_RS00295	0.49	+2.2
61,160	-		PFLU_RS00295	0.49	+0.3
61,160	-		PFLU_RS00295	0.49	+1.1
61,160	-		PFLU_RS00295	0.49	+0.1
61,160	-		PFLU_RS00295	0.49	-2.8
61,160	-		PFLU_RS00295	0.49	+0.7
61,160	-		PFLU_RS00295	0.49	-2.4
61,160	-		PFLU_RS00295	0.49	+0.7
61,160	-		PFLU_RS00295	0.49	+1.1
61,160	-		PFLU_RS00295	0.49	-1.1
61,234	+		PFLU_RS00295	0.54	+0.5
61,234	+		PFLU_RS00295	0.54	+1.4
61,235	-		PFLU_RS00295	0.54	+0.7
61,249	+		PFLU_RS00295	0.55	+2.3
61,249	+		PFLU_RS00295	0.55	+0.2
61,250	-		PFLU_RS00295	0.55	-2.0
61,299	+		PFLU_RS00295	0.58	-0.6
61,299	+		PFLU_RS00295	0.58	-0.8
61,299	+		PFLU_RS00295	0.58	-0.2
61,299	+		PFLU_RS00295	0.58	+0.7
61,299	+		PFLU_RS00295	0.58	+1.4
61,299	+		PFLU_RS00295	0.58	+1.5
61,299	+		PFLU_RS00295	0.58	-2.4
61,299	+		PFLU_RS00295	0.58	-0.2
61,299	+		PFLU_RS00295	0.58	-0.1
61,299	+		PFLU_RS00295	0.58	-1.9
61,299	+		PFLU_RS00295	0.58	+0.3
61,299	+		PFLU_RS00295	0.58	-0.2
61,299	+		PFLU_RS00295	0.58	-0.9
61,299	+		PFLU_RS00295	0.58	+0.2
61,299	+		PFLU_RS00295	0.58	+3.0
61,299	+		PFLU_RS00295	0.58	+3.1
61,299	+		PFLU_RS00295	0.58	+1.8
61,299	+		PFLU_RS00295	0.58	-1.5
61,299	+		PFLU_RS00295	0.58	-0.0
61,299	+		PFLU_RS00295	0.58	-1.1
61,299	+		PFLU_RS00295	0.58	+1.7
61,299	+		PFLU_RS00295	0.58	-0.6
61,299	+		PFLU_RS00295	0.58	-0.6
61,300	-		PFLU_RS00295	0.58	-0.8
61,300	-		PFLU_RS00295	0.58	-1.7
61,300	-		PFLU_RS00295	0.58	+0.9
61,300	-		PFLU_RS00295	0.58	-1.2
61,300	-		PFLU_RS00295	0.58	-1.8
61,300	-		PFLU_RS00295	0.58	+2.3
61,300	-		PFLU_RS00295	0.58	+1.4
61,300	-		PFLU_RS00295	0.58	+0.8
61,300	-		PFLU_RS00295	0.58	+1.5
61,300	-		PFLU_RS00295	0.58	-3.6
61,300	-		PFLU_RS00295	0.58	+1.7
61,300	-		PFLU_RS00295	0.58	+3.3