Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12390

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
2,746,857	-		PFLU_RS12385	0.63	-2.0
2,746,990	+		PFLU_RS12385	0.71	+3.3
2,746,991	-		PFLU_RS12385	0.71	-0.8
2,747,105	+		PFLU_RS12385	0.78	+0.9
2,747,105	+		PFLU_RS12385	0.78	+2.2
2,747,105	+		PFLU_RS12385	0.78	-2.3
2,747,186	-		PFLU_RS12385	0.83	-0.3
2,747,351	+				+2.2
2,747,351	+				+0.4
2,747,351	+				+1.5
2,747,351	+				-0.0
2,747,351	+				-2.4
2,747,351	+				+2.6
2,747,351	+				+1.6
2,747,351	+				-0.8
2,747,351	+				-1.8
2,747,351	+				+0.7
2,747,352	-				-0.5
2,747,352	-				-1.6
2,747,352	-				-0.4
2,747,352	-				-1.9
2,747,352	-				-1.2
2,747,352	-				+2.7
2,747,352	-				+2.4
2,747,360	+				-2.2
2,747,361	-				-1.1
2,747,379	-				-0.2
2,747,478	-				+2.1
2,747,527	+				-0.8
2,747,528	-				+1.6
2,747,528	-				-2.6
2,747,557	+				-1.6
2,747,558	-				+0.7
2,747,558	-				-2.4
2,747,558	-				-1.7
2,747,558	-				-2.7
2,747,558	-				+1.9
2,747,562	-				-1.1
2,747,565	+				-1.9
2,747,565	+				+2.5
2,747,565	+				+0.9
2,747,565	+				+2.6
2,747,565	+				-1.7
2,747,565	+				-2.5
2,747,566	-				+0.3
2,747,566	-				+4.1
2,747,566	-				-0.0
2,747,566	-				-1.5
2,747,566	-				-0.0
2,747,616	+				+2.0
2,747,616	+				-2.6
2,747,617	-				+0.7
2,747,617	-				-0.6
2,747,617	-				-1.2
2,747,617	-				-2.3
2,747,617	-				-1.2
2,747,617	-				-2.5
2,747,617	-				+0.6
2,747,617	-				-1.0
2,747,617	-				-0.9
2,747,617	-				-0.5
2,747,630	+				+2.6
2,747,630	+				-0.7
2,747,630	+				-1.7
2,747,630	+				-1.1
2,747,630	+				+1.4
2,747,630	+				-2.1
2,747,631	-				-1.3
2,747,786	+				-1.5
2,747,819	+				+1.7
2,747,833	-		PFLU_RS12390	0.11	-2.5
2,747,910	+		PFLU_RS12390	0.17	-2.3
2,747,910	+		PFLU_RS12390	0.17	-2.1
2,747,910	+		PFLU_RS12390	0.17	+0.2
2,747,910	+		PFLU_RS12390	0.17	-2.5
2,747,910	+		PFLU_RS12390	0.17	+0.1
2,747,910	+		PFLU_RS12390	0.17	+0.4
2,747,910	+		PFLU_RS12390	0.17	-0.7
2,747,910	+		PFLU_RS12390	0.17	-2.6
2,747,910	+		PFLU_RS12390	0.17	-3.3
2,747,911	-		PFLU_RS12390	0.17	-0.1
2,747,911	-		PFLU_RS12390	0.17	-2.4
2,747,911	-		PFLU_RS12390	0.17	-1.0
2,747,911	-		PFLU_RS12390	0.17	+2.5
2,747,911	-		PFLU_RS12390	0.17	-1.7
2,748,050	+		PFLU_RS12390	0.28	-2.8
2,748,374	+		PFLU_RS12390	0.55	-1.1
2,748,374	+		PFLU_RS12390	0.55	+0.2
2,748,417	+		PFLU_RS12390	0.58	+0.6
2,748,417	+		PFLU_RS12390	0.58	+0.1
2,748,418	-		PFLU_RS12390	0.58	+1.8
2,748,418	-		PFLU_RS12390	0.58	+3.4
2,748,418	-		PFLU_RS12390	0.58	+0.4
2,748,418	-		PFLU_RS12390	0.58	+3.2
2,748,418	-		PFLU_RS12390	0.58	-1.4
2,748,555	+		PFLU_RS12390	0.70	-0.2
2,748,555	+		PFLU_RS12390	0.70	+3.7
2,748,556	-		PFLU_RS12390	0.70	+0.1
2,748,556	-		PFLU_RS12390	0.70	-0.0
2,748,556	-		PFLU_RS12390	0.70	-0.2
2,748,604	-		PFLU_RS12390	0.73	-0.0
2,748,604	-		PFLU_RS12390	0.73	+1.5
2,748,612	+		PFLU_RS12390	0.74	+1.2
2,748,613	-		PFLU_RS12390	0.74	+1.4
2,748,613	-		PFLU_RS12390	0.74	+1.4
2,748,660	+		PFLU_RS12390	0.78	+1.9
2,748,660	+		PFLU_RS12390	0.78	+0.2
2,748,661	-		PFLU_RS12390	0.78	-1.3
2,748,711	+		PFLU_RS12390	0.82	+0.6
2,748,711	+		PFLU_RS12390	0.82	-2.2
2,748,711	+		PFLU_RS12390	0.82	+0.5
2,748,711	+		PFLU_RS12390	0.82	+1.9
2,748,711	+		PFLU_RS12390	0.82	-0.4
2,748,712	-		PFLU_RS12390	0.82	-0.9
2,748,712	-		PFLU_RS12390	0.82	+0.4
2,748,712	-		PFLU_RS12390	0.82	-0.9
2,748,712	-		PFLU_RS12390	0.82	-2.0
2,748,712	-		PFLU_RS12390	0.82	+1.5
2,748,747	+		PFLU_RS12390	0.85	-1.8
2,748,748	-		PFLU_RS12390	0.85	+0.8
2,748,782	+		PFLU_RS12390	0.88	-0.7
2,748,782	+		PFLU_RS12390	0.88	-1.4
2,748,782	+		PFLU_RS12390	0.88	-2.5
2,748,783	-		PFLU_RS12390	0.88	+1.6
2,748,783	-		PFLU_RS12390	0.88	-2.9
2,748,783	-		PFLU_RS12390	0.88	-1.8
2,748,783	-		PFLU_RS12390	0.88	-1.4
2,748,783	-		PFLU_RS12390	0.88	+2.4
2,748,941	+				-2.1
2,748,941	+				-0.6
2,748,941	+				+1.4
2,748,942	-				-1.0
2,748,942	-				-1.2
2,748,942	-				+1.1
2,748,942	-				+2.1
2,748,947	+				-3.0
2,748,948	-				-1.8
2,748,948	-				+1.4
2,749,000	+		PFLU_RS12395	0.20	+1.3
2,749,000	+		PFLU_RS12395	0.20	-2.3
2,749,000	+		PFLU_RS12395	0.20	-1.4
2,749,000	+		PFLU_RS12395	0.20	-1.5
2,749,000	+		PFLU_RS12395	0.20	-1.5
2,749,000	+		PFLU_RS12395	0.20	-1.3
2,749,022	+		PFLU_RS12395	0.26	-1.2
2,749,277	+				+1.9
2,749,277	+				+1.2
2,749,278	-				+1.9
2,749,293	+				-0.5
2,749,293	+				-2.3
2,749,293	+				+1.3
2,749,293	+				-1.6
2,749,293	+				-0.4
2,749,294	-				-1.5
2,749,294	-				+1.9
2,749,294	-				-1.4
2,749,294	-				-1.1
2,749,294	-				-0.9
2,749,294	-				-2.1
2,749,294	-				+0.2
2,749,294	-				-1.5
2,749,338	+				+2.1
2,749,338	+				-0.7
2,749,352	+				+0.6
2,749,352	+				+2.1
2,749,352	+				-0.0
2,749,352	+				+0.3
2,749,352	+				-1.7
2,749,352	+				-0.4
2,749,352	+				+0.6
2,749,353	-				+0.9
2,749,353	-				-3.0
2,749,353	-				+1.4
2,749,353	-				+1.1
2,749,353	-				+0.4
2,749,353	-				-2.6
2,749,472	+		PFLU_RS12400	0.17	-1.3
2,749,472	+		PFLU_RS12400	0.17	-2.3
2,749,473	-		PFLU_RS12400	0.17	+0.3
2,749,473	-		PFLU_RS12400	0.17	+1.4
2,749,493	+		PFLU_RS12400	0.19	+3.0
2,749,493	+		PFLU_RS12400	0.19	+2.0
2,749,493	+		PFLU_RS12400	0.19	+0.2
2,749,493	+		PFLU_RS12400	0.19	-1.4
2,749,493	+		PFLU_RS12400	0.19	-2.6
2,749,493	+		PFLU_RS12400	0.19	-0.5
2,749,493	+		PFLU_RS12400	0.19	+0.3
2,749,493	+		PFLU_RS12400	0.19	-0.6
2,749,493	+		PFLU_RS12400	0.19	-2.6
2,749,493	+		PFLU_RS12400	0.19	-0.8
2,749,493	+		PFLU_RS12400	0.19	-1.9
2,749,493	+		PFLU_RS12400	0.19	+1.8
2,749,493	+		PFLU_RS12400	0.19	-0.9
2,749,493	+		PFLU_RS12400	0.19	-1.6
2,749,493	+		PFLU_RS12400	0.19	-2.6
2,749,493	+		PFLU_RS12400	0.19	+2.6
2,749,494	-		PFLU_RS12400	0.19	+0.8
2,749,494	-		PFLU_RS12400	0.19	-1.5
2,749,494	-		PFLU_RS12400	0.19	+0.3
2,749,494	-		PFLU_RS12400	0.19	+1.5
2,749,494	-		PFLU_RS12400	0.19	+3.5
2,749,494	-		PFLU_RS12400	0.19	-2.9
2,749,494	-		PFLU_RS12400	0.19	+1.3
2,749,579	+		PFLU_RS12400	0.27	+2.0
2,749,580	-		PFLU_RS12400	0.27	-1.6
2,749,640	+		PFLU_RS12400	0.33	+0.5
2,749,640	+		PFLU_RS12400	0.33	-0.1
2,749,640	+		PFLU_RS12400	0.33	+2.6
2,749,640	+		PFLU_RS12400	0.33	-2.1
2,749,640	+		PFLU_RS12400	0.33	+1.4
2,749,640	+		PFLU_RS12400	0.33	-2.6
2,749,641	-		PFLU_RS12400	0.33	+1.1
2,749,642	+		PFLU_RS12400	0.33	+2.5
2,749,642	+		PFLU_RS12400	0.33	-0.4
2,749,642	+		PFLU_RS12400	0.33	-1.6
2,749,642	+		PFLU_RS12400	0.33	+0.2
2,749,642	+		PFLU_RS12400	0.33	+1.2
2,749,642	+		PFLU_RS12400	0.33	+1.0
2,749,642	+		PFLU_RS12400	0.33	+0.7
2,749,642	+		PFLU_RS12400	0.33	+1.4
2,749,643	-		PFLU_RS12400	0.33	-0.1
2,749,643	-		PFLU_RS12400	0.33	+2.0
2,749,643	-		PFLU_RS12400	0.33	+2.3
2,749,643	-		PFLU_RS12400	0.33	-2.0
2,749,643	-		PFLU_RS12400	0.33	-0.6
2,749,643	-		PFLU_RS12400	0.33	-1.7
2,749,643	-		PFLU_RS12400	0.33	-2.2
2,749,643	-		PFLU_RS12400	0.33	-1.4
2,749,643	-		PFLU_RS12400	0.33	+1.3
2,749,643	-		PFLU_RS12400	0.33	+2.3
2,749,643	-		PFLU_RS12400	0.33	-2.0
2,749,653	+		PFLU_RS12400	0.34	+2.1
2,749,653	+		PFLU_RS12400	0.34	-2.1
2,749,653	+		PFLU_RS12400	0.34	-0.3
2,749,654	-		PFLU_RS12400	0.34	+2.0
2,749,654	-		PFLU_RS12400	0.34	-1.5
2,749,663	+		PFLU_RS12400	0.35	-0.6
2,749,745	+		PFLU_RS12400	0.43	-2.0
2,749,745	+		PFLU_RS12400	0.43	-0.7
2,749,745	+		PFLU_RS12400	0.43	+1.0
2,749,745	+		PFLU_RS12400	0.43	-1.4
2,749,745	+		PFLU_RS12400	0.43	+0.5
2,749,745	+		PFLU_RS12400	0.43	-2.6
2,749,745	+		PFLU_RS12400	0.43	+0.9
2,749,745	+		PFLU_RS12400	0.43	-1.4
2,749,745	+		PFLU_RS12400	0.43	+2.6
2,749,745	+		PFLU_RS12400	0.43	-2.0
2,749,745	+		PFLU_RS12400	0.43	-0.1
2,749,745	+		PFLU_RS12400	0.43	-0.8
2,749,745	+		PFLU_RS12400	0.43	+2.2
2,749,745	+		PFLU_RS12400	0.43	-2.1
2,749,745	+		PFLU_RS12400	0.43	-2.1
2,749,745	+		PFLU_RS12400	0.43	-1.7
2,749,746	-		PFLU_RS12400	0.43	-0.6
2,749,746	-		PFLU_RS12400	0.43	-0.8
2,749,746	-		PFLU_RS12400	0.43	-1.5
2,749,746	-		PFLU_RS12400	0.43	+0.3
2,749,746	-		PFLU_RS12400	0.43	-1.8
2,749,746	-		PFLU_RS12400	0.43	-1.7
2,749,786	+		PFLU_RS12400	0.47	+0.4
2,749,786	+		PFLU_RS12400	0.47	-1.9
2,749,786	+		PFLU_RS12400	0.47	-0.3
2,749,786	+		PFLU_RS12400	0.47	+0.1
2,749,787	-		PFLU_RS12400	0.47	-1.3
2,749,787	-		PFLU_RS12400	0.47	+2.1
2,749,787	-		PFLU_RS12400	0.47	-1.5
2,749,787	-		PFLU_RS12400	0.47	-2.2
2,749,787	-		PFLU_RS12400	0.47	-2.6
2,749,806	-		PFLU_RS12400	0.49	+1.6
2,749,806	-		PFLU_RS12400	0.49	+0.6
2,749,868	+		PFLU_RS12400	0.55	+3.4
2,749,868	+		PFLU_RS12400	0.55	+1.1
2,749,868	+		PFLU_RS12400	0.55	+0.6
2,749,868	+		PFLU_RS12400	0.55	-0.7
2,749,868	+		PFLU_RS12400	0.55	+4.1
2,749,868	+		PFLU_RS12400	0.55	-0.5
2,749,868	+		PFLU_RS12400	0.55	-2.4
2,749,868	+		PFLU_RS12400	0.55	+1.9
2,749,868	+		PFLU_RS12400	0.55	+0.9
2,749,869	-		PFLU_RS12400	0.55	-1.0
2,749,869	-		PFLU_RS12400	0.55	-1.2
2,749,869	-		PFLU_RS12400	0.55	-0.5
2,749,869	-		PFLU_RS12400	0.55	-1.0
2,749,869	-		PFLU_RS12400	0.55	-1.6
2,749,869	-		PFLU_RS12400	0.55	-0.7
2,749,869	-		PFLU_RS12400	0.55	+2.6
2,749,869	-		PFLU_RS12400	0.55	+0.9
2,749,869	-		PFLU_RS12400	0.55	-1.2
2,749,869	-		PFLU_RS12400	0.55	-1.9
2,749,869	-		PFLU_RS12400	0.55	-1.4
2,749,869	-		PFLU_RS12400	0.55	+0.4
2,749,869	-		PFLU_RS12400	0.55	-1.1
2,749,869	-		PFLU_RS12400	0.55	-0.5
2,749,870	+		PFLU_RS12400	0.55	+0.2
2,749,870	+		PFLU_RS12400	0.55	-2.0
2,749,870	+		PFLU_RS12400	0.55	-1.8
2,749,870	+		PFLU_RS12400	0.55	+1.9
2,749,870	+		PFLU_RS12400	0.55	-0.7
2,749,870	+		PFLU_RS12400	0.55	-2.5
2,749,870	+		PFLU_RS12400	0.55	-1.3
2,749,870	+		PFLU_RS12400	0.55	+2.4
2,749,870	+		PFLU_RS12400	0.55	+1.6
2,749,870	+		PFLU_RS12400	0.55	+1.7
2,749,870	+		PFLU_RS12400	0.55	-0.1
2,749,870	+		PFLU_RS12400	0.55	-2.5
2,749,870	+		PFLU_RS12400	0.55	-0.8
2,749,870	+		PFLU_RS12400	0.55	-1.7
2,749,870	+		PFLU_RS12400	0.55	-1.9
2,749,870	+		PFLU_RS12400	0.55	-1.6
2,749,870	+		PFLU_RS12400	0.55	-2.2
2,749,870	+		PFLU_RS12400	0.55	-0.5
2,749,870	+		PFLU_RS12400	0.55	+2.8
2,749,870	+		PFLU_RS12400	0.55	+1.8
2,749,870	+		PFLU_RS12400	0.55	-1.2
2,749,870	+		PFLU_RS12400	0.55	-1.8
2,749,870	+		PFLU_RS12400	0.55	-2.5
2,749,870	+		PFLU_RS12400	0.55	-1.5
2,749,870	+		PFLU_RS12400	0.55	-0.9
2,749,870	+		PFLU_RS12400	0.55	-1.3
2,749,870	+		PFLU_RS12400	0.55	+1.1
2,749,870	+		PFLU_RS12400	0.55	+2.3
2,749,870	+		PFLU_RS12400	0.55	-0.4
2,749,870	+		PFLU_RS12400	0.55	+0.1
2,749,870	+		PFLU_RS12400	0.55	-1.8
2,749,870	+		PFLU_RS12400	0.55	+3.0
2,749,870	+		PFLU_RS12400	0.55	+0.3
2,749,870	+		PFLU_RS12400	0.55	+0.0
2,749,870	+		PFLU_RS12400	0.55	-1.3
2,749,870	+		PFLU_RS12400	0.55	+0.2
2,749,870	+		PFLU_RS12400	0.55	+1.6
2,749,870	+		PFLU_RS12400	0.55	-0.8
2,749,870	+		PFLU_RS12400	0.55	+2.3
2,749,870	+		PFLU_RS12400	0.55	+1.2
2,749,870	+		PFLU_RS12400	0.55	-2.1
2,749,870	+		PFLU_RS12400	0.55	+0.7
2,749,870	+		PFLU_RS12400	0.55	+0.7
2,749,870	+		PFLU_RS12400	0.55	+1.1
2,749,870	+		PFLU_RS12400	0.55	-1.6
2,749,870	+		PFLU_RS12400	0.55	+1.2
2,749,870	+		PFLU_RS12400	0.55	+0.7
2,749,870	+		PFLU_RS12400	0.55	-1.8
2,749,870	+		PFLU_RS12400	0.55	+0.1
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2,749,871	-		PFLU_RS12400	0.55	-2.2
2,749,871	-		PFLU_RS12400	0.55	+0.7
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2,749,871	-		PFLU_RS12400	0.55	-2.7
2,749,871	-		PFLU_RS12400	0.55	+0.0
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2,749,871	-		PFLU_RS12400	0.55	+1.3
2,749,871	-		PFLU_RS12400	0.55	-0.2
2,749,871	-		PFLU_RS12400	0.55	+2.3
2,749,871	-		PFLU_RS12400	0.55	-0.6
2,749,871	-		PFLU_RS12400	0.55	-2.7
2,749,871	-		PFLU_RS12400	0.55	-1.4
2,749,871	-		PFLU_RS12400	0.55	+0.7
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2,749,871	-		PFLU_RS12400	0.55	-2.5
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2,749,871	-		PFLU_RS12400	0.55	-1.9
2,749,871	-		PFLU_RS12400	0.55	+0.4
2,749,871	-		PFLU_RS12400	0.55	+0.1
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2,749,871	-		PFLU_RS12400	0.55	-1.9
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2,749,874	+		PFLU_RS12400	0.55	-0.7
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